RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C PDH1Q12428 516 aaKnown RBP3.36□□□□□ -1.87
LCB4YOR171C YOR019WQ99248 730 aa3.36□□□□□ -1.87
LCB4YOR171C CPA2P03965 1118 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C MET17P06106 444 aa3.35□□□□□ -1.87
LCB4YOR171C ALG7P07286 448 aa3.35□□□□□ -1.87
LCB4YOR171C CDC16P09798 840 aa3.35□□□□□ -1.87
LCB4YOR171C KSS1P14681 368 aa3.35□□□□□ -1.87
LCB4YOR171C ACO1P19414 778 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
LCB4YOR171C VPS3P23643 1011 aa3.35□□□□□ -1.87
LCB4YOR171C GRR1P24814 1151 aa3.35□□□□□ -1.87
LCB4YOR171C ROX1P25042 368 aa3.35□□□□□ -1.87
LCB4YOR171C SLC1P33333 303 aa3.35□□□□□ -1.87
LCB4YOR171C SIF2P38262 535 aa3.35□□□□□ -1.87
LCB4YOR171C HRB1P38922 454 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
LCB4YOR171C EAF5P39995 279 aa3.35□□□□□ -1.87
LCB4YOR171C EMP65P40085 556 aa3.35□□□□□ -1.87
LCB4YOR171C FTR1P40088 404 aa3.35□□□□□ -1.87
LCB4YOR171C UBP7P40453 1071 aa3.35□□□□□ -1.87
LCB4YOR171C SMK1P41808 388 aa3.35□□□□□ -1.87
LCB4YOR171C LYS4P49367 693 aaPredicted RBP3.35□□□□□ -1.87
LCB4YOR171C UBC11P52492 156 aa3.35□□□□□ -1.87
LCB4YOR171C ARP5P53946 755 aa3.35□□□□□ -1.87
LCB4YOR171C PRO2P54885 456 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C CEG1Q01159 459 aaPredicted RBP3.35□□□□□ -1.87
LCB4YOR171C RNT1Q02555 471 aa3.35□□□□□ -1.87
LCB4YOR171C MFB1Q04922 465 aa3.35□□□□□ -1.87
LCB4YOR171C TSR1Q07381 788 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
LCB4YOR171C NGL1Q08213 363 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C LSP1Q12230 341 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C SKS1Q12505 502 aa3.35□□□□□ -1.87
LCB4YOR171C BRR1Q99177 341 aaPredicted RBP3.35□□□□□ -1.87
LCB4YOR171C SNF1P06782 633 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C POL3P15436 1097 aa3.35□□□□□ -1.87
LCB4YOR171C SPS22P25380 463 aa3.35□□□□□ -1.87
LCB4YOR171C MGM1P32266 881 aa3.35□□□□□ -1.87
LCB4YOR171C HMX1P32339 317 aa3.35□□□□□ -1.87
LCB4YOR171C MVD1P32377 396 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C MTC7P32633 139 aa3.35□□□□□ -1.87
LCB4YOR171C TRM2P33753 639 aa3.35□□□□□ -1.87
LCB4YOR171C PCH2P38126 564 aa3.35□□□□□ -1.87
LCB4YOR171C NPR2P39923 615 aa3.35□□□□□ -1.87
LCB4YOR171C IRC5P43610 853 aa3.35□□□□□ -1.87
LCB4YOR171C ENP2P48234 707 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C TAF4P50105 388 aa3.35□□□□□ -1.87
LCB4YOR171C TOF1P53840 1238 aa3.35□□□□□ -1.87
LCB4YOR171C CNM67P53865 581 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C TEP1P53916 434 aa3.35□□□□□ -1.87
LCB4YOR171C OAZ1Q02803 292 aa3.35□□□□□ -1.87
LCB4YOR171C YML119WQ03208 357 aa3.35□□□□□ -1.87
LCB4YOR171C VBA4Q04602 768 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C RRN11Q04712 507 aa3.35□□□□□ -1.87
LCB4YOR171C ATG26Q06321 1198 aa3.35□□□□□ -1.87
LCB4YOR171C OMS1Q06668 471 aa3.35□□□□□ -1.87
LCB4YOR171C RRT8Q08219 342 aa3.35□□□□□ -1.87
LCB4YOR171C YOL073CQ08232 322 aa3.35□□□□□ -1.87
LCB4YOR171C RTC5Q12108 567 aaKnown RBP3.35□□□□□ -1.87
LCB4YOR171C BUG1Q12191 341 aa3.35□□□□□ -1.87
LCB4YOR171C POM34Q12445 299 aa3.35□□□□□ -1.87
LCB4YOR171C AVL9Q12500 764 aa3.35□□□□□ -1.87
LCB4YOR171C SIR3P06701 978 aa3.34□□□□□ -1.87
LCB4YOR171C PPR1P07272 904 aaPredicted RBP3.34□□□□□ -1.87
LCB4YOR171C SUR1P33300 382 aa3.34□□□□□ -1.87
LCB4YOR171C XRS2P33301 854 aa3.34□□□□□ -1.87
LCB4YOR171C LTV1P34078 463 aa3.34□□□□□ -1.87
LCB4YOR171C RMA1P36001 430 aaKnown RBP3.34□□□□□ -1.87
LCB4YOR171C SET3P36124 751 aa3.34□□□□□ -1.87
LCB4YOR171C SUL1P38359 859 aa3.34□□□□□ -1.87
LCB4YOR171C AXL2P38928 823 aa3.34□□□□□ -1.87
LCB4YOR171C YHB1P39676 399 aaKnown RBP3.34□□□□□ -1.87
LCB4YOR171C PAN2P53010 1115 aaPredicted RBP3.34□□□□□ -1.87
LCB4YOR171C SAP4P53036 818 aa3.34□□□□□ -1.87
LCB4YOR171C TEL2P53038 688 aa3.34□□□□□ -1.87
LCB4YOR171C SUN4P53616 420 aa3.34□□□□□ -1.87
LCB4YOR171C YNL144CP53907 740 aa3.34□□□□□ -1.87
LCB4YOR171C EOS1P53938 366 aa3.34□□□□□ -1.87
LCB4YOR171C MTD1Q02046 320 aaKnown RBP3.34□□□□□ -1.87
LCB4YOR171C FCP1Q03254 732 aa3.34□□□□□ -1.87
LCB4YOR171C GYL1Q04322 720 aa3.34□□□□□ -1.87
LCB4YOR171C KAP95Q06142 861 aaKnown RBP3.34□□□□□ -1.87
LCB4YOR171C DIB1Q06819 143 aaPredicted RBP3.34□□□□□ -1.87
LCB4YOR171C PSY3Q12318 242 aa3.34□□□□□ -1.87
LCB4YOR171C CAR2P07991 424 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C GUK1P15454 187 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C THR4P16120 514 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C KIN82P25341 720 aa3.33□□□□□ -1.88
LCB4YOR171C RRP43P25359 394 aaPredicted RBP3.33□□□□□ -1.88
LCB4YOR171C YJU2P28320 278 aaPredicted RBP3.33□□□□□ -1.88
LCB4YOR171C PRE4P30657 266 aa3.33□□□□□ -1.88
LCB4YOR171C DGR2P32330 852 aa3.33□□□□□ -1.88
LCB4YOR171C BCS1P32839 456 aa3.33□□□□□ -1.88
LCB4YOR171C HIS7P33734 552 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C BMH2P34730 273 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C YSW1P38280 609 aa3.33□□□□□ -1.88
LCB4YOR171C SRP68P38687 599 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C FMP52P40008 231 aa3.33□□□□□ -1.88
LCB4YOR171C ARF3P40994 183 aaRIP-Chip data3.33□□□□□ -1.88not detected
LCB4YOR171C BPL1P48445 690 aaPredicted RBP3.33□□□□□ -1.88
LCB4YOR171C SGF73P53165 657 aa3.33□□□□□ -1.88
LCB4YOR171C SNF12P53628 566 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms