RNA–Protein interactions for RNA: YOR038C

HIR2, Transcript of Subunit of HIR nucleosome assembly complex, yeast

Gene HIR2, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIR2	YOR038C	SFI1	Q12369	946 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	ENA5	Q12691	1091 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	CTF3	Q12748	733 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	GAL80	P04387	435 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	GAL10	P04397	699 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	TPK1	P06244	397 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	ATP1	P07251	545 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	RNR1	P21524	888 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	RAD57	P25301	460 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	RSA4	P25382	515 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	PDC6	P26263	563 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	PCH2	P38126	564 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	TDA3	P38758	523 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	RAD55	P38953	406 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	DSE1	P40077	573 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	MMF1	P40185	145 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	LTP1	P40347	161 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	UBP7	P40453	1071 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	NOP9	P47077	666 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	BPL1	P48445	690 aa	Predicted RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	ZIP2	P53061	704 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	TAD1	P53065	400 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	UTP8	P53276	713 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	EEB1	Q02891	456 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	ECM11	Q04110	302 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	YML082W	Q04533	649 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	YLR345W	Q06137	509 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	VAC14	Q06708	880 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
HIR2	YOR038C	LOT6	Q07923	191 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	RRT8	Q08219	342 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	ABP140	Q08641	628 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	SPE3	Q12074	293 aa	Known RBP	4.92	□□□□□ -1.62
HIR2	YOR038C	ZPS1	Q12512	249 aa		4.92	□□□□□ -1.62
HIR2	YOR038C	TRM1	P15565	570 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	SEC15	P22224	910 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MGM101	P32787	269 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	MDJ1	P35191	511 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	PTC4	P38089	393 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MAK5	P38112	773 aa	Predicted RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	MAP2	P38174	421 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	SHE3	P38272	425 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	SAF1	P38352	637 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	APM2	P38700	605 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	BEM4	P39011	633 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MTW1	P39731	289 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	DPH1	P40487	425 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	ALT1	P52893	592 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	TEL2	P53038	688 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	YGR111W	P53265	400 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	BOP3	P53958	396 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	RSC4	Q02206	625 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MFB1	Q04922	465 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	RTN1	Q04947	295 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	RIO1	Q12196	484 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	YOR022C	Q12204	715 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	PDH1	Q12428	516 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	MDM12	Q92328	271 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	CKA1	P15790	372 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MLS1	P30952	554 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	ERG3	P32353	365 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	DAL3	P32459	195 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	PRP19	P32523	503 aa	Known RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	GYP6	P32806	458 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	SUR1	P33300	382 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	RRP1	P35178	278 aa	Predicted RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	YBR284W	P38150	797 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	OPT1	P40897	799 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	CEP3	P40969	608 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	YJR096W	P47137	282 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MND1	P53102	219 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	NGL3	Q03210	505 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	MZM1	Q03429	123 aa	Predicted RBP	4.91	□□□□□ -1.62
HIR2	YOR038C	DAL4	Q04895	635 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	PIB1	Q06651	286 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	RTT10	Q08924	1013 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	YPR027C	Q12079	277 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	SEC39	Q12745	709 aa		4.91	□□□□□ -1.62
HIR2	YOR038C	SEM1	O94742	89 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	TEF1	P02994	458 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	SEN2	P16658	377 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	DBP3	P20447	523 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	RRP43	P25359	394 aa	Predicted RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	VBA3	P25594	458 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	ABD1	P32783	436 aa	Predicted RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	SLC1	P33333	303 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	RMA1	P36001	430 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	SIF2	P38262	535 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	MMS21	P38632	267 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	STB5	P38699	743 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	ATF1	P40353	525 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	MET18	P40469	1032 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	NAS2	P40555	220 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	YRB1	P41920	201 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	APT1	P49435	187 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	NUT1	P53114	1132 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	YGL140C	P53120	1219 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	DRN1	P53255	507 aa	Known RBP	4.9	□□□□□ -1.62
HIR2	YOR038C	EOS1	P53938	366 aa		4.9	□□□□□ -1.62
HIR2	YOR038C	VBA4	Q04602	768 aa	Known RBP	4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms