RNA–Protein interactions for RNA: YML124C

TUB3, Transcript of Alpha-tubulin, yeast

Gene TUB3, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB3	YML124C	CYS3	P31373	394 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	SIN4	P32259	974 aa		4.83	□□□□□ -1.64
TUB3	YML124C	NIP1	P32497	812 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	SMI1	P32566	505 aa		4.83	□□□□□ -1.64
TUB3	YML124C	MRE11	P32829	692 aa		4.83	□□□□□ -1.64
TUB3	YML124C	CSE2	P33308	149 aa		4.83	□□□□□ -1.64
TUB3	YML124C	RCN1	P36054	211 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YKR015C	P36111	568 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YBL036C	P38197	257 aa		4.83	□□□□□ -1.64
TUB3	YML124C	ECM2	P38241	364 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	VMA22	P38784	181 aa		4.83	□□□□□ -1.64
TUB3	YML124C	DSE1	P40077	573 aa		4.83	□□□□□ -1.64
TUB3	YML124C	SNL1	P40548	159 aa		4.83	□□□□□ -1.64
TUB3	YML124C	MKT1	P40850	830 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	SNZ3	P43545	298 aa		4.83	□□□□□ -1.64
TUB3	YML124C	NMD5	P46970	1048 aa		4.83	□□□□□ -1.64
TUB3	YML124C	ASG7	P46993	209 aa		4.83	□□□□□ -1.64
TUB3	YML124C	SNZ2	P53824	298 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YNL058C	P53947	316 aa		4.83	□□□□□ -1.64
TUB3	YML124C	UTP6	Q02354	440 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	HFD1	Q04458	532 aa		4.83	□□□□□ -1.64
TUB3	YML124C	NSE1	Q07913	336 aa		4.83	□□□□□ -1.64
TUB3	YML124C	SOG2	Q08817	791 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YOR289W	Q12012	251 aa	Predicted RBP	4.83	□□□□□ -1.64
TUB3	YML124C	TAF10	Q12030	206 aa		4.83	□□□□□ -1.64
TUB3	YML124C	RTC5	Q12108	567 aa	Known RBP	4.83	□□□□□ -1.64
TUB3	YML124C	EMP46	Q12396	444 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YIL002W-A	Q3E7Z5	69 aa		4.83	□□□□□ -1.64
TUB3	YML124C	YBL113C	Q7M4S9	792 aa		4.83	□□□□□ -1.64
TUB3	YML124C	TIF1	P10081	395 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
TUB3	YML124C	PUT4	P15380	627 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MER1	P16523	270 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MSB1	P21339	1137 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	TRX1	P22217	103 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	VPS3	P23643	1011 aa		4.82	□□□□□ -1.64
TUB3	YML124C	OCA4	P25366	362 aa		4.82	□□□□□ -1.64
TUB3	YML124C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
TUB3	YML124C	SEC1	P30619	724 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	PYC2	P32327	1180 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	UTR2	P32623	467 aa		4.82	□□□□□ -1.64
TUB3	YML124C	FRE1	P32791	686 aa		4.82	□□□□□ -1.64
TUB3	YML124C	PEP12	P32854	288 aa		4.82	□□□□□ -1.64
TUB3	YML124C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
TUB3	YML124C	PCA1	P38360	1216 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MSG5	P38590	489 aa		4.82	□□□□□ -1.64
TUB3	YML124C	PCM1	P38628	557 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	YHR218W	P38899	603 aa		4.82	□□□□□ -1.64
TUB3	YML124C	PCF11	P39081	626 aa	Predicted RBP	4.82	□□□□□ -1.64
TUB3	YML124C	YMR134W	P40207	237 aa		4.82	□□□□□ -1.64
TUB3	YML124C	KHA1	P40309	873 aa		4.82	□□□□□ -1.64
TUB3	YML124C	APS3	P47064	194 aa		4.82	□□□□□ -1.64
TUB3	YML124C	NOP9	P47077	666 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	SRB7	P47822	140 aa		4.82	□□□□□ -1.64
TUB3	YML124C	YML6	P51998	286 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MCM6	P53091	1017 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	YGR054W	P53235	642 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	FYV6	P53913	173 aa		4.82	□□□□□ -1.64
TUB3	YML124C	RPL22B	P56628	122 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	VPS16	Q03308	798 aa		4.82	□□□□□ -1.64
TUB3	YML124C	RCR2	Q03446	210 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	TIF35	Q04067	274 aa	Known RBP	4.82	□□□□□ -1.64
TUB3	YML124C	ENT2	Q05785	613 aa		4.82	□□□□□ -1.64
TUB3	YML124C	SEC10	Q06245	871 aa		4.82	□□□□□ -1.64
TUB3	YML124C	RSC3	Q06639	885 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MCM21	Q06675	368 aa		4.82	□□□□□ -1.64
TUB3	YML124C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
TUB3	YML124C	AIM39	Q08223	395 aa		4.82	□□□□□ -1.64
TUB3	YML124C	OSW1	Q08692	278 aa		4.82	□□□□□ -1.64
TUB3	YML124C	UIP4	Q08926	304 aa		4.82	□□□□□ -1.64
TUB3	YML124C	VPS54	Q12071	889 aa		4.82	□□□□□ -1.64
TUB3	YML124C	GAL80	P04387	435 aa		4.81	□□□□□ -1.64
TUB3	YML124C	TPK1	P06244	397 aa		4.81	□□□□□ -1.64
TUB3	YML124C	RAD10	P06838	210 aa		4.81	□□□□□ -1.64
TUB3	YML124C	CIT2	P08679	460 aa		4.81	□□□□□ -1.64
TUB3	YML124C	TUB3	P09734	445 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	REC107	P21651	314 aa		4.81	□□□□□ -1.64
TUB3	YML124C	AEP2	P22136	580 aa		4.81	□□□□□ -1.64
TUB3	YML124C	CLB2	P24869	491 aa		4.81	□□□□□ -1.64
TUB3	YML124C	LRE1	P25579	583 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	GPI10	P30777	616 aa		4.81	□□□□□ -1.64
TUB3	YML124C	VMA8	P32610	256 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	PTR2	P32901	601 aa		4.81	□□□□□ -1.64
TUB3	YML124C	SRB2	P34162	210 aa		4.81	□□□□□ -1.64
TUB3	YML124C	RSM22	P36056	628 aa		4.81	□□□□□ -1.64
TUB3	YML124C	ABZ1	P37254	787 aa	Predicted RBP	4.81	□□□□□ -1.64
TUB3	YML124C	ATP3	P38077	311 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	SHE3	P38272	425 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	SWC5	P38326	303 aa		4.81	□□□□□ -1.64
TUB3	YML124C	VHC1	P38329	1120 aa		4.81	□□□□□ -1.64
TUB3	YML124C	STP2	P38704	541 aa		4.81	□□□□□ -1.64
TUB3	YML124C	SIP5	P40210	489 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	IRR1	P40541	1150 aa		4.81	□□□□□ -1.64
TUB3	YML124C	UBP6	P43593	499 aa	Known RBP	4.81	□□□□□ -1.64
TUB3	YML124C	SPC98	P53540	846 aa		4.81	□□□□□ -1.64
TUB3	YML124C	STP1	Q00947	519 aa		4.81	□□□□□ -1.64
TUB3	YML124C	RPM2	Q02773	1202 aa		4.81	□□□□□ -1.64
TUB3	YML124C	ATP25	Q03153	612 aa		4.81	□□□□□ -1.64
TUB3	YML124C	USA1	Q03714	838 aa		4.81	□□□□□ -1.64
TUB3	YML124C	KAP95	Q06142	861 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms