RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	THS1	P04801	734 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	WHI2	P12611	486 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SNF4	P12904	322 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	KGD1	P20967	1014 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	ACE2	P21192	770 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SEC1	P30619	724 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	HBS1	P32769	611 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	KTR2	P33550	425 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	GTT1	P40582	234 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	RTS2	P40962	232 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YJR141W	P47172	347 aa	Predicted RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	ADI1	Q03677	179 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	NGL1	Q08213	363 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	YLR053C	Q12026	108 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SPE4	Q12455	300 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YLR462W	O13556	202 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	PRI2	P20457	528 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	DBF20	P32328	564 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YHL049C	P38722	271 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	HAL5	P38970	855 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	YEL075C	P39972	122 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YER189W	P40104	122 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YFL064C	P43540	174 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	EMP47	P43555	445 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SIW14	P53965	281 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	ISA1	Q07821	250 aa	Predicted RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	ZEO1	Q08245	113 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	YCL001W-B	Q96VH2	84 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	KIN1	P13185	1064 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	RDS2	P19541	446 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	NUP2	P32499	720 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SPR1	P32603	445 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	CAF4	P36130	643 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	KTR3	P38130	404 aa	Predicted RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	CCT8	P47079	568 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	RGA2	Q06407	1009 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	RCL1	Q08096	367 aa	Predicted RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	ADE8	P04161	214 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	TOP3	P13099	656 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	RPS7A	P26786	190 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	SIP2	P34164	415 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	GRX7	P38068	203 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	RRP8	P38961	392 aa	Known RBP	4.23	□□□□□ -1.73
SEN1	YLR430W	DUN1	P39009	513 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	GSH2	Q08220	491 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	SLD7	Q08457	257 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	GTT2	Q12390	233 aa		4.23	□□□□□ -1.73
SEN1	YLR430W	NTG1	P31378	399 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	IMP3	P32899	183 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	EAP1	P36041	632 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	ALG3	P38179	458 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	SAD1	P43589	448 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	HSH155	P49955	971 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	YTP1	P53584	459 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	UTP14	Q04500	899 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	KAP95	Q06142	861 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	LUC7	Q07508	261 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	ADE5,7	P07244	802 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	ARG82	P07250	355 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	RNR3	P21672	869 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	KAR4	P25583	335 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	PSY2	P40164	858 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	GID8	P40208	455 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	CSM2	P40465	213 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	REF2	P42073	533 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	UBC12	P52491	188 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	SPO20	Q04359	397 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	SMF3	Q12078	473 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	YOL107W	Q12239	342 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	RPL25	P04456	142 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	RPP1A	P05318	106 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	CDC6	P09119	513 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	FBA1	P14540	359 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	NPP1	P25353	742 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	MSG5	P38590	489 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	LCP5	P40079	357 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	RRN5	Q02983	363 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	ARP10	Q04549	284 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	FLC1	Q08967	793 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	RAD10	P06838	210 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	RIT1	P23796	513 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	NDC1	P32500	655 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	PTM1	P32857	523 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	MCM7	P38132	845 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	GUA1	P38625	525 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	RIM4	P38741	713 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	MMM1	P41800	426 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	BPL1	P48445	690 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	KTR5	P53966	522 aa	Predicted RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	COX4	P04037	155 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	ATG22	P25568	528 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	YKL100C	P34248	587 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	SDS22	P36047	338 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	YBR285W	P38354	144 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	CNN1	P43618	361 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	TBF1	Q02457	562 aa		4.22	□□□□□ -1.73
SEN1	YLR430W	DUS3	Q06053	668 aa	Known RBP	4.22	□□□□□ -1.73
SEN1	YLR430W	GAL1	P04385	528 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	PHO8	P11491	566 aa		4.21	□□□□□ -1.73
SEN1	YLR430W	PTP2	P29461	750 aa		4.21	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms