RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C SRL3P36167 246 aa11.16□□□□□ -0.62
SPT8YLR055C YMC2P38087 329 aa11.16□□□□□ -0.62
SPT8YLR055C HPM1P40481 377 aa11.16□□□□□ -0.62
SPT8YLR055C YIR016WP40572 265 aa11.16□□□□□ -0.62
SPT8YLR055C TRF5P48561 642 aaKnown RBP11.16□□□□□ -0.62
SPT8YLR055C ENT4Q07872 247 aa11.16□□□□□ -0.62
SPT8YLR055C YPR089WO13585 888 aa11.16□□□□□ -0.62
SPT8YLR055C GID7P25569 745 aa11.16□□□□□ -0.62
SPT8YLR055C ATO2P32907 282 aa11.16□□□□□ -0.62
SPT8YLR055C BZZ1P38822 633 aa11.16□□□□□ -0.62
SPT8YLR055C RPT2P40327 437 aaKnown RBP11.16□□□□□ -0.62
SPT8YLR055C STB1P42845 420 aa11.16□□□□□ -0.62
SPT8YLR055C CCT7P42943 550 aaKnown RBP11.16□□□□□ -0.62
SPT8YLR055C YVH1Q02256 364 aaKnown RBP11.16□□□□□ -0.62
SPT8YLR055C KRE28Q04431 385 aa11.16□□□□□ -0.62
SPT8YLR055C MNL2Q12205 849 aa11.16□□□□□ -0.62
SPT8YLR055C NTO1Q12311 748 aa11.16□□□□□ -0.62
SPT8YLR055C VPS5Q92331 675 aa11.16□□□□□ -0.62
SPT8YLR055C CAR1P00812 333 aaKnown RBP11.15□□□□□ -0.62
SPT8YLR055C MAS1P10507 462 aa11.15□□□□□ -0.62
SPT8YLR055C RAD16P31244 790 aa11.15□□□□□ -0.62
SPT8YLR055C HEM12P32347 362 aaPredicted RBP11.15□□□□□ -0.62
SPT8YLR055C SRB2P34162 210 aa11.15□□□□□ -0.62
SPT8YLR055C RDH54P38086 958 aa11.15□□□□□ -0.62
SPT8YLR055C YBR284WP38150 797 aa11.15□□□□□ -0.62
SPT8YLR055C DSF2P38213 736 aa11.15□□□□□ -0.62
SPT8YLR055C MGS1P40151 587 aa11.15□□□□□ -0.62
SPT8YLR055C UBP7P40453 1071 aa11.15□□□□□ -0.62
SPT8YLR055C TPO1Q07824 586 aa11.15□□□□□ -0.62
SPT8YLR055C GPM2Q12008 311 aa11.15□□□□□ -0.62
SPT8YLR055C APM4Q99186 491 aa11.15□□□□□ -0.62
SPT8YLR055C STE2D6VTK4 431 aa11.14□□□□□ -0.63
SPT8YLR055C ERR1P0CX10 437 aa11.14□□□□□ -0.63
SPT8YLR055C ERR2P0CX11 437 aa11.14□□□□□ -0.63
SPT8YLR055C CRP1P38845 465 aaKnown RBP11.14□□□□□ -0.63
SPT8YLR055C PIK1P39104 1066 aa11.14□□□□□ -0.63
SPT8YLR055C ERR3P42222 437 aa11.14□□□□□ -0.63
SPT8YLR055C YPR003CP53394 754 aa11.14□□□□□ -0.63
SPT8YLR055C RKM2Q03942 479 aa11.14□□□□□ -0.63
SPT8YLR055C RAD30Q04049 632 aa11.14□□□□□ -0.63
SPT8YLR055C FMP25Q08023 583 aa11.14□□□□□ -0.63
SPT8YLR055C THI21Q08975 551 aa11.14□□□□□ -0.63
SPT8YLR055C HSF1P10961 833 aa11.14□□□□□ -0.63
SPT8YLR055C URE2P23202 354 aaKnown RBP11.14□□□□□ -0.63
SPT8YLR055C RAD27P26793 382 aa11.14□□□□□ -0.63
SPT8YLR055C HRR25P29295 494 aaKnown RBP11.14□□□□□ -0.63
SPT8YLR055C TKL2P33315 681 aa11.14□□□□□ -0.63
SPT8YLR055C OTU2P38747 307 aaKnown RBP11.14□□□□□ -0.63
SPT8YLR055C UTP9P38882 575 aaKnown RBP11.14□□□□□ -0.63
SPT8YLR055C CUS2P53830 285 aaPredicted RBP11.14□□□□□ -0.63
SPT8YLR055C YNL034WP53963 612 aa11.14□□□□□ -0.63
SPT8YLR055C YNL018CP53976 612 aa11.14□□□□□ -0.63
SPT8YLR055C LEA1Q08963 238 aaPredicted RBP11.14□□□□□ -0.63
SPT8YLR055C LDB17Q12342 491 aa11.14□□□□□ -0.63
SPT8YLR055C IZH4Q99393 312 aa11.14□□□□□ -0.63
SPT8YLR055C AI5_ALPHAQ9ZZX1 630 aa11.14□□□□□ -0.63
SPT8YLR055C GCY1P14065 312 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
SPT8YLR055C PEP12P32854 288 aa11.13□□□□□ -0.63
SPT8YLR055C STB5P38699 743 aa11.13□□□□□ -0.63
SPT8YLR055C AVT2P39981 480 aa11.13□□□□□ -0.63
SPT8YLR055C MND2P40577 368 aa11.13□□□□□ -0.63
SPT8YLR055C EMC2P47133 292 aaKnown RBP11.13□□□□□ -0.63
SPT8YLR055C YNL058CP53947 316 aa11.13□□□□□ -0.63
SPT8YLR055C SLU7Q02775 382 aaKnown RBP11.13□□□□□ -0.63
SPT8YLR055C SMP3Q04174 516 aa11.13□□□□□ -0.63
SPT8YLR055C DYN3Q04949 312 aa11.13□□□□□ -0.63
SPT8YLR055C YLR257WQ06146 321 aaKnown RBP11.13□□□□□ -0.63
SPT8YLR055C VPS54Q12071 889 aa11.13□□□□□ -0.63
SPT8YLR055C CHS5Q12114 671 aaKnown RBP11.13□□□□□ -0.63
SPT8YLR055C YMR030W-AQ3E760 96 aa11.13□□□□□ -0.63
SPT8YLR055C YPR117WQ06116 2489 aa11.13□□□□□ -0.63
SPT8YLR055C RHO2P06781 192 aa11.12□□□□□ -0.63
SPT8YLR055C COR1P07256 457 aa11.12□□□□□ -0.63
SPT8YLR055C PGS1P25578 521 aa11.12□□□□□ -0.63
SPT8YLR055C CDC3P32457 520 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C UTP11P34247 250 aaPredicted RBP11.12□□□□□ -0.63
SPT8YLR055C IRR1P40541 1150 aa11.12□□□□□ -0.63
SPT8YLR055C MAF1P41910 395 aa11.12□□□□□ -0.63
SPT8YLR055C CCT8P47079 568 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C RFX1P48743 811 aa11.12□□□□□ -0.63
SPT8YLR055C NDL1Q06568 189 aa11.12□□□□□ -0.63
SPT8YLR055C YOR342CQ12182 319 aa11.12□□□□□ -0.63
SPT8YLR055C YPK1P12688 680 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C HSC82P15108 705 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C RPS5P26783 225 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C YBR056WP38081 501 aa11.12□□□□□ -0.63
SPT8YLR055C ATG12P38316 186 aa11.12□□□□□ -0.63
SPT8YLR055C YBR259WP38338 688 aa11.12□□□□□ -0.63
SPT8YLR055C LYS9P38999 446 aa11.12□□□□□ -0.63
SPT8YLR055C PFD1P46988 109 aa11.12□□□□□ -0.63
SPT8YLR055C YGR054WP53235 642 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C REX2P54964 269 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C YMR226CQ05016 267 aaKnown RBP11.12□□□□□ -0.63
SPT8YLR055C CIR2Q08822 631 aa11.12□□□□□ -0.63
SPT8YLR055C EAP1P36041 632 aaKnown RBP11.11□□□□□ -0.63
SPT8YLR055C YBR138CP38277 524 aa11.11□□□□□ -0.63
SPT8YLR055C YGR283CP53336 341 aaPredicted RBP11.11□□□□□ -0.63
SPT8YLR055C YDR239CQ03780 787 aa11.11□□□□□ -0.63
SPT8YLR055C RSM24Q03976 319 aa11.11□□□□□ -0.63
SPT8YLR055C DIS3Q08162 1001 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 1146 ms