RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W SAE2P46946 345 aa1.17□□□□□ -2.22
PRP16YKR086W YNL144CP53907 740 aa1.17□□□□□ -2.22
PRP16YKR086W SEC5P89102 971 aa1.17□□□□□ -2.22
PRP16YKR086W PFA5Q03289 374 aa1.17□□□□□ -2.22
PRP16YKR086W CEF1Q03654 590 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W VPS64Q03944 604 aa1.17□□□□□ -2.22
PRP16YKR086W AFT2Q08957 416 aa1.17□□□□□ -2.22
PRP16YKR086W PSF3Q12146 194 aa1.17□□□□□ -2.22
PRP16YKR086W AI5_ALPHAQ9ZZX1 630 aa1.17□□□□□ -2.22
PRP16YKR086W PSK1P31374 1356 aa1.17□□□□□ -2.22
PRP16YKR086W DUR1,2P32528 1835 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W TPK1P06244 397 aa1.16□□□□□ -2.22
PRP16YKR086W LOT5P34234 306 aa1.16□□□□□ -2.22
PRP16YKR086W IRC5P43610 853 aa1.16□□□□□ -2.22
PRP16YKR086W COG2P53271 262 aa1.16□□□□□ -2.22
PRP16YKR086W ZDS2P54786 942 aa1.16□□□□□ -2.22
PRP16YKR086W WAR1Q03631 944 aa1.16□□□□□ -2.22
PRP16YKR086W RPL7AP05737 244 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W MIS1P09440 975 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W AQY1P0CD91 305 aa1.16□□□□□ -2.22
PRP16YKR086W YCP4P25349 247 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W PGS1P25578 521 aa1.16□□□□□ -2.22
PRP16YKR086W BLI1P35727 113 aa1.16□□□□□ -2.22
PRP16YKR086W LTP1P40347 161 aa1.16□□□□□ -2.22
PRP16YKR086W HIS6P40545 261 aa1.16□□□□□ -2.22
PRP16YKR086W RMD8P43620 662 aa1.16□□□□□ -2.22
PRP16YKR086W CPR8P53728 308 aa1.16□□□□□ -2.22
PRP16YKR086W ERG13P54839 491 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W NSE5Q03718 556 aa1.16□□□□□ -2.22
PRP16YKR086W PEX15Q08215 383 aa1.16□□□□□ -2.22
PRP16YKR086W TIP41Q12199 356 aa1.16□□□□□ -2.22
PRP16YKR086W RPL7BQ12213 244 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W ZPS1Q12512 249 aa1.16□□□□□ -2.22
PRP16YKR086W CPA2P03965 1118 aaKnown RBP1.15□□□□□ -2.22
PRP16YKR086W ICL1P28240 557 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W NAB3P38996 802 aaKnown RBP RIP-Chip data1.15□□□□□ -2.22not detected
PRP16YKR086W YFL015CP43578 164 aa1.15□□□□□ -2.22
PRP16YKR086W YNL234WP53857 426 aa1.15□□□□□ -2.22
PRP16YKR086W DUG3P53871 357 aa1.15□□□□□ -2.22
PRP16YKR086W RPL15BP54780 204 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W RSC9Q03124 581 aa1.15□□□□□ -2.22
PRP16YKR086W YDR415CQ04033 374 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W CRF1Q04930 467 aa1.15□□□□□ -2.22
PRP16YKR086W IRC3Q06683 689 aa1.15□□□□□ -2.22
PRP16YKR086W YLR049CQ12110 428 aa1.15□□□□□ -2.22
PRP16YKR086W ISA2Q12425 185 aa1.15□□□□□ -2.22
PRP16YKR086W SKM1Q12469 655 aa1.15□□□□□ -2.22
PRP16YKR086W YER175W-AQ8TGU4 54 aa1.15□□□□□ -2.22
PRP16YKR086W YLR302CO13544 120 aa1.15□□□□□ -2.23
PRP16YKR086W POL3P15436 1097 aa1.15□□□□□ -2.23
PRP16YKR086W SPO12P17123 173 aa1.15□□□□□ -2.23
PRP16YKR086W TGL1P34163 548 aa1.15□□□□□ -2.23
PRP16YKR086W TEF4P36008 412 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W ROT2P38138 954 aa1.15□□□□□ -2.23
PRP16YKR086W RRP3P38712 501 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W FLO5P38894 1075 aa1.15□□□□□ -2.23
PRP16YKR086W NOC2P39744 710 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W GPP2P40106 250 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W MAD2P40958 196 aa1.15□□□□□ -2.23
PRP16YKR086W YFR016CP43597 1233 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W NMD5P46970 1048 aa1.15□□□□□ -2.23
PRP16YKR086W PEF1P53238 335 aa1.15□□□□□ -2.23
PRP16YKR086W BUD17P53727 317 aa1.15□□□□□ -2.23
PRP16YKR086W SPN1Q06505 410 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W ECM30Q06673 1274 aa1.15□□□□□ -2.23
PRP16YKR086W YAP7Q08182 245 aa1.15□□□□□ -2.23
PRP16YKR086W YOL057WQ08225 711 aa1.15□□□□□ -2.23
PRP16YKR086W YOR378WQ08902 515 aa1.15□□□□□ -2.23
PRP16YKR086W DIN7Q12086 430 aa1.15□□□□□ -2.23
PRP16YKR086W GLE1Q12315 538 aa1.15□□□□□ -2.23
PRP16YKR086W ERG27Q12452 347 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
PRP16YKR086W CLB4P24871 460 aa1.15□□□□□ -2.23
PRP16YKR086W RRP43P25359 394 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W PLC1P32383 869 aa1.15□□□□□ -2.23
PRP16YKR086W APM3P38153 483 aa1.15□□□□□ -2.23
PRP16YKR086W ERC1P38767 581 aa1.15□□□□□ -2.23
PRP16YKR086W STL1P39932 569 aa1.15□□□□□ -2.23
PRP16YKR086W YIL161WP40449 235 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W PUS4P48567 403 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W STP1Q00947 519 aa1.15□□□□□ -2.23
PRP16YKR086W ARP9Q05123 467 aa1.15□□□□□ -2.23
PRP16YKR086W HRD3Q05787 833 aa1.15□□□□□ -2.23
PRP16YKR086W RTK1Q12100 620 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W YRA1Q12159 226 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W RAD9P14737 1309 aa1.15□□□□□ -2.23
PRP16YKR086W ILS1P09436 1072 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W CDC15P27636 974 aa1.14□□□□□ -2.23
PRP16YKR086W RPN12P32496 274 aa1.14□□□□□ -2.23
PRP16YKR086W RPC34P32910 317 aa1.14□□□□□ -2.23
PRP16YKR086W YBL029WP38201 376 aa1.14□□□□□ -2.23
PRP16YKR086W YBR071WP38243 211 aa1.14□□□□□ -2.23
PRP16YKR086W SAP1P39955 897 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W GAT1P43574 510 aa1.14□□□□□ -2.23
PRP16YKR086W NET1P47035 1189 aa1.14□□□□□ -2.23
PRP16YKR086W GLO1P50107 326 aa1.14□□□□□ -2.23
PRP16YKR086W MSS11Q03825 758 aa1.14□□□□□ -2.23
PRP16YKR086W SLX4Q12098 748 aa1.14□□□□□ -2.23
PRP16YKR086W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
PRP16YKR086W COX17Q12287 69 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms