RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W JJJ1P53863 590 aa4.54□□□□□ -1.68
SSH4YKL124W VPS9P54787 451 aa4.54□□□□□ -1.68
SSH4YKL124W NGL3Q03210 505 aa4.54□□□□□ -1.68
SSH4YKL124W VPS38Q05919 439 aa4.54□□□□□ -1.68
SSH4YKL124W THI7Q05998 598 aa4.54□□□□□ -1.68
SSH4YKL124W YCS4Q06156 1176 aa4.54□□□□□ -1.68
SSH4YKL124W TSR2Q06672 205 aaKnown RBP4.54□□□□□ -1.68
SSH4YKL124W TPO1Q07824 586 aa4.54□□□□□ -1.68
SSH4YKL124W RSB1Q08417 382 aa4.54□□□□□ -1.68
SSH4YKL124W PER33Q12144 273 aa4.54□□□□□ -1.68
SSH4YKL124W YLR046CQ12253 270 aa4.54□□□□□ -1.68
SSH4YKL124W RRP36Q12481 300 aaPredicted RBP4.54□□□□□ -1.68
SSH4YKL124W ERR1P0CX10 437 aa4.53□□□□□ -1.68
SSH4YKL124W ERR2P0CX11 437 aa4.53□□□□□ -1.68
SSH4YKL124W SST2P11972 698 aaKnown RBP4.53□□□□□ -1.68
SSH4YKL124W PMS1P14242 873 aa4.53□□□□□ -1.68
SSH4YKL124W HNM1P19807 563 aa4.53□□□□□ -1.68
SSH4YKL124W CLN2P20438 545 aa4.53□□□□□ -1.68
SSH4YKL124W ADY2P25613 283 aa4.53□□□□□ -1.68
SSH4YKL124W THI4P32318 326 aa4.53□□□□□ -1.68
SSH4YKL124W YKL100CP34248 587 aa4.53□□□□□ -1.68
SSH4YKL124W RCK2P38623 610 aa4.53□□□□□ -1.68
SSH4YKL124W YHL041WP38730 149 aa4.53□□□□□ -1.68
SSH4YKL124W AIM18P38884 321 aa4.53□□□□□ -1.68
SSH4YKL124W SAK1P38990 1142 aa4.53□□□□□ -1.68
SSH4YKL124W POP2P39008 433 aa4.53□□□□□ -1.68
SSH4YKL124W STL1P39932 569 aa4.53□□□□□ -1.68
SSH4YKL124W KHA1P40309 873 aa4.53□□□□□ -1.68
SSH4YKL124W MNT3P40549 630 aa4.53□□□□□ -1.68
SSH4YKL124W CNN1P43618 361 aa4.53□□□□□ -1.68
SSH4YKL124W DLD2P46681 530 aaKnown RBP4.53□□□□□ -1.68
SSH4YKL124W YNR063WP53749 607 aa4.53□□□□□ -1.68
SSH4YKL124W ALF1P53904 254 aa4.53□□□□□ -1.68
SSH4YKL124W ORC3P54790 616 aa4.53□□□□□ -1.68
SSH4YKL124W BET4Q00618 327 aa4.53□□□□□ -1.68
SSH4YKL124W YML131WQ03102 365 aa4.53□□□□□ -1.68
SSH4YKL124W YMR187CQ03236 431 aa4.53□□□□□ -1.68
SSH4YKL124W SPC19Q03954 165 aa4.53□□□□□ -1.68
SSH4YKL124W UFO1Q04511 668 aa4.53□□□□□ -1.68
SSH4YKL124W ERG11P10614 530 aa4.52□□□□□ -1.69
SSH4YKL124W SEC63P14906 663 aa4.52□□□□□ -1.69
SSH4YKL124W GLK1P17709 500 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W RDS2P19541 446 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W AAT2P23542 418 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W MIH1P23748 554 aa4.52□□□□□ -1.69
SSH4YKL124W TFB1P32776 642 aa4.52□□□□□ -1.69
SSH4YKL124W SRX1P36077 127 aa4.52□□□□□ -1.69
SSH4YKL124W PCA1P38360 1216 aa4.52□□□□□ -1.69
SSH4YKL124W RIX1P38883 763 aaPredicted RBP4.52□□□□□ -1.69
SSH4YKL124W GIP4P39732 760 aa4.52□□□□□ -1.69
SSH4YKL124W YEL028WP39989 153 aa4.52□□□□□ -1.69
SSH4YKL124W ARG2P40360 574 aa4.52□□□□□ -1.69
SSH4YKL124W EMW1P42842 904 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W RRT5P43607 289 aa4.52□□□□□ -1.69
SSH4YKL124W RFX1P48743 811 aa4.52□□□□□ -1.69
SSH4YKL124W COQ5P49017 307 aa4.52□□□□□ -1.69
SSH4YKL124W AMA1P50082 593 aa4.52□□□□□ -1.69
SSH4YKL124W KAP114P53067 1004 aa4.52□□□□□ -1.69
SSH4YKL124W COG6P53959 839 aa4.52□□□□□ -1.69
SSH4YKL124W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
SSH4YKL124W PIR1Q03178 341 aa4.52□□□□□ -1.69
SSH4YKL124W PEX15Q08215 383 aa4.52□□□□□ -1.69
SSH4YKL124W APL4Q12028 832 aa4.52□□□□□ -1.69
SSH4YKL124W MCD1Q12158 566 aa4.52□□□□□ -1.69
SSH4YKL124W PEX11Q12462 236 aa4.52□□□□□ -1.69
SSH4YKL124W EFG1Q3E705 233 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W RAD3P06839 778 aa4.52□□□□□ -1.69
SSH4YKL124W TUB3P09734 445 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W SFL1P20134 766 aa4.52□□□□□ -1.69
SSH4YKL124W MRPL8P22353 238 aa4.52□□□□□ -1.69
SSH4YKL124W RAD57P25301 460 aa4.52□□□□□ -1.69
SSH4YKL124W DAL80P26343 269 aa4.52□□□□□ -1.69
SSH4YKL124W KIP2P28743 706 aa4.52□□□□□ -1.69
SSH4YKL124W MEI4P29467 408 aa4.52□□□□□ -1.69
SSH4YKL124W MRS6P32864 603 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W LIP5P32875 414 aa4.52□□□□□ -1.69
SSH4YKL124W YBL055CP34220 418 aaPredicted RBP4.52□□□□□ -1.69
SSH4YKL124W YKL151CP36059 337 aa4.52□□□□□ -1.69
SSH4YKL124W RPC37P36121 282 aa4.52□□□□□ -1.69
SSH4YKL124W RRT2P38332 387 aa4.52□□□□□ -1.69
SSH4YKL124W BIT2P38346 545 aa4.52□□□□□ -1.69
SSH4YKL124W WSC4P38739 605 aa4.52□□□□□ -1.69
SSH4YKL124W TCD1P38756 429 aa4.52□□□□□ -1.69
SSH4YKL124W YHR078WP38799 552 aa4.52□□□□□ -1.69
SSH4YKL124W BFR1P38934 470 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
SSH4YKL124W FAA3P39002 694 aa4.52□□□□□ -1.69
SSH4YKL124W PAC1P39946 494 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W YER034WP40022 185 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W RIC1P40395 1056 aa4.52□□□□□ -1.69
SSH4YKL124W AIR1P40507 360 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W EFM4P40516 257 aa4.52□□□□□ -1.69
SSH4YKL124W MND2P40577 368 aa4.52□□□□□ -1.69
SSH4YKL124W AIM14P53109 570 aa4.52□□□□□ -1.69
SSH4YKL124W KXD1P53158 218 aa4.52□□□□□ -1.69
SSH4YKL124W NOG2P53742 486 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W IPI3P53877 555 aa4.52□□□□□ -1.69
SSH4YKL124W SMA1Q02651 245 aa4.52□□□□□ -1.69
SSH4YKL124W ENT5Q03769 411 aaKnown RBP4.52□□□□□ -1.69
SSH4YKL124W SOV1Q04748 898 aa4.52□□□□□ -1.69
SSH4YKL124W DBP9Q06218 594 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 122.2 ms