RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C BUD14P27637 709 aa2.11□□□□□ -2.07
RTT101YJL047C PAP1P29468 568 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C RPC82P32349 654 aa2.11□□□□□ -2.07
RTT101YJL047C PET127P32606 800 aa2.11□□□□□ -2.07
RTT101YJL047C SRB2P34162 210 aa2.11□□□□□ -2.07
RTT101YJL047C GEX2P36173 615 aa2.11□□□□□ -2.07
RTT101YJL047C MAL33P38157 468 aa2.11□□□□□ -2.07
RTT101YJL047C VID24P38263 362 aa2.11□□□□□ -2.07
RTT101YJL047C EHT1P38295 451 aa2.11□□□□□ -2.07
RTT101YJL047C YDR089WP38966 869 aa2.11□□□□□ -2.07
RTT101YJL047C LRO1P40345 661 aa2.11□□□□□ -2.07
RTT101YJL047C YGL036WP53185 909 aaPredicted RBP2.11□□□□□ -2.07
RTT101YJL047C LSC2P53312 427 aa2.11□□□□□ -2.07
RTT101YJL047C ATG21Q02887 496 aa2.11□□□□□ -2.07
RTT101YJL047C YML037CQ03703 340 aa2.11□□□□□ -2.07
RTT101YJL047C SOV1Q04748 898 aa2.11□□□□□ -2.07
RTT101YJL047C PEX19Q07418 342 aa2.11□□□□□ -2.07
RTT101YJL047C AIM6Q07716 390 aa2.11□□□□□ -2.07
RTT101YJL047C PUS7Q08647 676 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C TCO89Q08921 799 aa2.11□□□□□ -2.07
RTT101YJL047C UBX3Q12229 455 aa2.11□□□□□ -2.07
RTT101YJL047C FBP1P09201 348 aa2.1□□□□□ -2.07
RTT101YJL047C PUT4P15380 627 aa2.1□□□□□ -2.07
RTT101YJL047C TUP1P16649 713 aa2.1□□□□□ -2.07
RTT101YJL047C NAR1P23503 491 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C RRP43P25359 394 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C PHO91P27514 894 aa2.1□□□□□ -2.07
RTT101YJL047C PRE2P30656 287 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C CRM1P30822 1084 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C SFA1P32771 386 aa2.1□□□□□ -2.07
RTT101YJL047C SEF1P34228 1148 aa2.1□□□□□ -2.07
RTT101YJL047C YUH1P35127 236 aa2.1□□□□□ -2.07
RTT101YJL047C NNK1P36003 928 aa2.1□□□□□ -2.07
RTT101YJL047C VFA1P40080 203 aa2.1□□□□□ -2.07
RTT101YJL047C SLZ1P40167 298 aa2.1□□□□□ -2.07
RTT101YJL047C CHS6P40955 746 aa2.1□□□□□ -2.07
RTT101YJL047C ALK1P43633 760 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C MDR1P53258 950 aa2.1□□□□□ -2.07
RTT101YJL047C HST3P53687 447 aa2.1□□□□□ -2.07
RTT101YJL047C RHO5P53879 331 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C VPS64Q03944 604 aa2.1□□□□□ -2.07
RTT101YJL047C TAP42Q04372 366 aa2.1□□□□□ -2.07
RTT101YJL047C RBS1Q05672 457 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C KAP95Q06142 861 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C YEH1Q07804 573 aa2.1□□□□□ -2.07
RTT101YJL047C YPL272CQ08984 517 aa2.1□□□□□ -2.07
RTT101YJL047C AVL9Q12500 764 aa2.1□□□□□ -2.07
RTT101YJL047C YOR019WQ99248 730 aa2.1□□□□□ -2.07
RTT101YJL047C RPP1AP05318 106 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C GAL7P08431 366 aa2.1□□□□□ -2.07
RTT101YJL047C LPD1P09624 499 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C BUD5P25300 642 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C SPS22P25380 463 aa2.1□□□□□ -2.07
RTT101YJL047C SPC110P32380 944 aa2.1□□□□□ -2.07
RTT101YJL047C PMT1P33775 817 aa2.1□□□□□ -2.07
RTT101YJL047C AUR1P36107 401 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C TDP1P38319 544 aa2.1□□□□□ -2.07
RTT101YJL047C DED81P38707 554 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C CRG1P38892 291 aaRIP-Chip data2.1□□□□□ -2.07not detected
RTT101YJL047C SMC2P38989 1170 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C SAK1P38990 1142 aa2.1□□□□□ -2.07
RTT101YJL047C YER034WP40022 185 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C SER3P40054 469 aa2.1□□□□□ -2.07
RTT101YJL047C PFA3P42836 336 aa2.1□□□□□ -2.07
RTT101YJL047C CAK1P43568 368 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C MTR3P48240 250 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C NCS6P53088 359 aa2.1□□□□□ -2.07
RTT101YJL047C RIA1P53893 1110 aa2.1□□□□□ -2.07
RTT101YJL047C CDA1Q06702 301 aa2.1□□□□□ -2.07
RTT101YJL047C SGO1Q08490 590 aa2.1□□□□□ -2.07
RTT101YJL047C UAF30Q08747 228 aa2.1□□□□□ -2.07
RTT101YJL047C TRE1Q08919 783 aa2.1□□□□□ -2.07
RTT101YJL047C YOR223WQ12015 292 aa2.1□□□□□ -2.07
RTT101YJL047C ATG29Q12092 213 aa2.1□□□□□ -2.07
RTT101YJL047C RIB2Q12362 591 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C PFK27Q12471 397 aaPredicted RBP2.1□□□□□ -2.07
RTT101YJL047C PNO1Q99216 274 aaKnown RBP2.1□□□□□ -2.07
RTT101YJL047C COQ4O13525 335 aa2.09□□□□□ -2.07
RTT101YJL047C DFR1P07807 211 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
RTT101YJL047C VPS33P20795 691 aa2.09□□□□□ -2.07
RTT101YJL047C PRE8P23639 250 aa2.09□□□□□ -2.07
RTT101YJL047C ERG6P25087 383 aaKnown RBP2.09□□□□□ -2.07
RTT101YJL047C SYN8P31377 255 aa2.09□□□□□ -2.07
RTT101YJL047C RME1P32338 300 aaKnown RBP2.09□□□□□ -2.07
RTT101YJL047C YME1P32795 747 aa2.09□□□□□ -2.07
RTT101YJL047C LTV1P34078 463 aa2.09□□□□□ -2.07
RTT101YJL047C PIM1P36775 1133 aa2.09□□□□□ -2.07
RTT101YJL047C PEX32P38292 413 aa2.09□□□□□ -2.07
RTT101YJL047C TIF5P38431 405 aaKnown RBP2.09□□□□□ -2.07
RTT101YJL047C SPT8P38915 602 aa2.09□□□□□ -2.07
RTT101YJL047C FTR1P40088 404 aa2.09□□□□□ -2.07
RTT101YJL047C BIT61P47041 543 aa2.09□□□□□ -2.07
RTT101YJL047C PET130P47065 347 aa2.09□□□□□ -2.07
RTT101YJL047C BPL1P48445 690 aaPredicted RBP2.09□□□□□ -2.07
RTT101YJL047C YGR111WP53265 400 aa2.09□□□□□ -2.07
RTT101YJL047C DSE4P53753 1117 aa2.09□□□□□ -2.07
RTT101YJL047C MAK10Q02197 733 aa2.09□□□□□ -2.07
RTT101YJL047C MRPL1Q04599 285 aa2.09□□□□□ -2.07
RTT101YJL047C ATG38Q05789 226 aaKnown RBP2.09□□□□□ -2.07
RTT101YJL047C MSC3Q05812 728 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms