RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	FAF1	P40546	346 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN9	YDR427W	CFD1	P40558	293 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	CDC1	P40986	491 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	ERR3	P42222	437 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	SKP2	P42843	763 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	ZAP1	P47043	880 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	YPR003C	P53394	754 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	MRPL13	Q02204	264 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	GET3	Q12154	354 aa	Known RBP	4.13	□□□□□ -1.75
RPN9	YDR427W	YPR089W	O13585	888 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YER190C-B	P0CX94	160 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YEL077W-A	P0CX95	160 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YGR296C-B	P0CX96	160 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YPL283W-B	P0CX97	160 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YPR204C-A	P0CX98	160 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	PCT1	P13259	424 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	UBC1	P21734	215 aa	Known RBP	4.12	□□□□□ -1.75
RPN9	YDR427W	COQ3	P27680	312 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	UBX6	P47049	396 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YDR109C	Q04585	715 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	STP3	Q05937	343 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	THI3	Q07471	609 aa		4.12	□□□□□ -1.75
RPN9	YDR427W	YPT1	P01123	206 aa	Known RBP	4.11	□□□□□ -1.75
RPN9	YDR427W	GAL4	P04386	881 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	NUC1	P08466	329 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	YAP1	P19880	650 aa	Known RBP	4.11	□□□□□ -1.75
RPN9	YDR427W	RFA2	P26754	273 aa	Known RBP	4.11	□□□□□ -1.75
RPN9	YDR427W	XRS2	P33301	854 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	VPS24	P36095	224 aa	Known RBP	4.11	□□□□□ -1.75
RPN9	YDR427W	ARN1	P38731	627 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	PSF2	P40359	213 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	YJL107C	P42947	387 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	ORC5	P50874	479 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	MRPL1	Q04599	285 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	PSR2	Q07949	397 aa		4.11	□□□□□ -1.75
RPN9	YDR427W	SPO16	P17122	198 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	PWP2	P25635	923 aa	Known RBP	4.1	□□□□□ -1.75
RPN9	YDR427W	YIL024C	P40543	189 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	SAP185	P40856	1058 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	RTS3	P53289	263 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	EAF7	P53911	425 aa	Known RBP	4.1	□□□□□ -1.75
RPN9	YDR427W	ADE16	P54113	591 aa	Known RBP	4.1	□□□□□ -1.75
RPN9	YDR427W	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	SWT1	Q12104	458 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	PCD1	Q12524	340 aa		4.1	□□□□□ -1.75
RPN9	YDR427W	ATP2	P00830	511 aa	Known RBP	4.09	□□□□□ -1.75
RPN9	YDR427W	NUP120	P35729	1037 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	MRPL36	P36531	177 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	IFA38	P38286	347 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	TPA1	P40032	644 aa	Known RBP	4.09	□□□□□ -1.75
RPN9	YDR427W	CTF18	P49956	741 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	VMS1	Q04311	632 aa	Known RBP	4.09	□□□□□ -1.75
RPN9	YDR427W	PFA4	Q12006	378 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	COX17	Q12287	69 aa		4.09	□□□□□ -1.75
RPN9	YDR427W	SRP54	P20424	541 aa	Known RBP	4.08	□□□□□ -1.76
RPN9	YDR427W	MGM1	P32266	881 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	TOM71	P38825	639 aa	Known RBP	4.08	□□□□□ -1.76
RPN9	YDR427W	YIL161W	P40449	235 aa	Known RBP	4.08	□□□□□ -1.76
RPN9	YDR427W	BNA1	P47096	177 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	RRT6	P53117	311 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN9	YDR427W	YGR021W	P53212	290 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	VTC3	Q02725	835 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	PDR8	Q06149	701 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	PIG1	Q06216	648 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	HER1	Q12276	1246 aa		4.08	□□□□□ -1.76
RPN9	YDR427W	TY2A-LR1	P0C2J4	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-F	P0CX61	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-GR2	P0CX62	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	AIM17	P23180	465 aa	Known RBP	4.07	□□□□□ -1.76
RPN9	YDR427W	CNA1	P23287	553 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-C	P25383	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	OCT1	P35999	772 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	VPS41	P38959	992 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	SMK1	P41808	388 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	ASE1	P50275	885 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	PSP1	P50896	841 aa	Known RBP	4.07	□□□□□ -1.76
RPN9	YDR427W	DCP2	P53550	970 aa	Known RBP	4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-DR2	Q03483	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	CSR1	Q06705	408 aa	Known RBP	4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-B	Q12260	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-OR2	Q12293	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-DR1	Q12392	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-OR1	Q12439	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	TY2A-DR3	Q99303	438 aa		4.07	□□□□□ -1.76
RPN9	YDR427W	MSS51	P32335	436 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	FUI1	P38196	639 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	YMR124W	P39523	943 aa	Known RBP	4.06	□□□□□ -1.76
RPN9	YDR427W	ASG1	P40467	964 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	COG1	P53079	417 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	RPL15B	P54780	204 aa	Predicted RBP	4.06	□□□□□ -1.76
RPN9	YDR427W	TMA16	Q08687	178 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	BUD7	Q08754	746 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	RRI1	Q12468	440 aa		4.06	□□□□□ -1.76
RPN9	YDR427W	TPK1	P06244	397 aa		4.05	□□□□□ -1.76
RPN9	YDR427W	YCP4	P25349	247 aa	Known RBP	4.05	□□□□□ -1.76
RPN9	YDR427W	MRS6	P32864	603 aa	Known RBP	4.05	□□□□□ -1.76
RPN9	YDR427W	RPT3	P33298	428 aa	Known RBP	4.05	□□□□□ -1.76
RPN9	YDR427W	PSY4	P38193	441 aa		4.05	□□□□□ -1.76
RPN9	YDR427W	RPN11	P43588	306 aa	Known RBP	4.05	□□□□□ -1.76
RPN9	YDR427W	SWA2	Q06677	668 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms