RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W PAH1P32567 862 aa2.19□□□□□ -2.06
SNF5YBR289W UBP13P38187 747 aa2.19□□□□□ -2.06
SNF5YBR289W NOP16P40007 231 aaKnown RBP2.19□□□□□ -2.06
SNF5YBR289W HXT9P40885 567 aa2.19□□□□□ -2.06
SNF5YBR289W ADE16P54113 591 aaKnown RBP2.19□□□□□ -2.06
SNF5YBR289W REG1Q00816 1014 aa2.19□□□□□ -2.06
SNF5YBR289W YDL073WQ07454 984 aa2.19□□□□□ -2.06
SNF5YBR289W YPL191CQ08930 360 aa2.19□□□□□ -2.06
SNF5YBR289W YPL216WQ08964 1102 aa2.19□□□□□ -2.06
SNF5YBR289W YOR019WQ99248 730 aa2.19□□□□□ -2.06
SNF5YBR289W FUM1P08417 488 aaKnown RBP2.18□□□□□ -2.06
SNF5YBR289W CDC16P09798 840 aa2.18□□□□□ -2.06
SNF5YBR289W KGD1P20967 1014 aaKnown RBP2.18□□□□□ -2.06
SNF5YBR289W LOT5P34234 306 aa2.18□□□□□ -2.06
SNF5YBR289W MSC1Q03104 513 aa2.18□□□□□ -2.06
SNF5YBR289W ENT4Q07872 247 aa2.18□□□□□ -2.06
SNF5YBR289W RDL1Q12305 139 aaKnown RBP2.18□□□□□ -2.06
SNF5YBR289W GPA1P08539 472 aa2.18□□□□□ -2.06
SNF5YBR289W SSH4P32343 579 aa2.18□□□□□ -2.06
SNF5YBR289W NPR2P39923 615 aa2.18□□□□□ -2.06
SNF5YBR289W MAM1P40065 302 aa2.18□□□□□ -2.06
SNF5YBR289W YIL166CP40445 542 aa2.18□□□□□ -2.06
SNF5YBR289W RPN11P43588 306 aaKnown RBP2.18□□□□□ -2.06
SNF5YBR289W VPS4P52917 437 aa2.18□□□□□ -2.06
SNF5YBR289W TAN1P53072 289 aaPredicted RBP2.18□□□□□ -2.06
SNF5YBR289W TIM10P87108 93 aa2.18□□□□□ -2.06
SNF5YBR289W TIM44Q01852 431 aa2.18□□□□□ -2.06
SNF5YBR289W MTG1Q03151 367 aaPredicted RBP2.18□□□□□ -2.06
SNF5YBR289W NCE102Q12207 173 aaRIP-Chip data2.18□□□□□ -2.06not detected
SNF5YBR289W TAD3Q9URQ3 322 aa2.18□□□□□ -2.06
SNF5YBR289W SEC12P11655 471 aa2.17□□□□□ -2.06
SNF5YBR289W PTC6P25646 442 aa2.17□□□□□ -2.06
SNF5YBR289W SRB5P32585 307 aa2.17□□□□□ -2.06
SNF5YBR289W TPA1P40032 644 aaKnown RBP2.17□□□□□ -2.06
SNF5YBR289W VPS27P40343 622 aaKnown RBP2.17□□□□□ -2.06
SNF5YBR289W ZAP1P47043 880 aa2.17□□□□□ -2.06
SNF5YBR289W ASI1P54074 624 aa2.17□□□□□ -2.06
SNF5YBR289W RPL15BP54780 204 aaPredicted RBP2.17□□□□□ -2.06
SNF5YBR289W ATG21Q02887 496 aa2.17□□□□□ -2.06
SNF5YBR289W INA17Q02888 182 aa2.17□□□□□ -2.06
SNF5YBR289W PIG1Q06216 648 aa2.17□□□□□ -2.06
SNF5YBR289W TGS1Q12052 315 aa2.17□□□□□ -2.06
SNF5YBR289W YMR085WP0CF18 432 aa2.17□□□□□ -2.06
SNF5YBR289W STE50P25344 346 aa2.17□□□□□ -2.06
SNF5YBR289W SNT1P25357 1226 aa2.17□□□□□ -2.06
SNF5YBR289W HOT13P36078 116 aa2.17□□□□□ -2.06
SNF5YBR289W SLZ1P40167 298 aa2.17□□□□□ -2.06
SNF5YBR289W ESL1P40456 1118 aa2.17□□□□□ -2.06
SNF5YBR289W SEC24P40482 926 aaKnown RBP2.17□□□□□ -2.06
SNF5YBR289W AAD10P47182 288 aa2.17□□□□□ -2.06
SNF5YBR289W RCO1Q04779 684 aa2.17□□□□□ -2.06
SNF5YBR289W ATG23Q06671 453 aa2.17□□□□□ -2.06
SNF5YBR289W GEP3Q08622 556 aa2.17□□□□□ -2.06
SNF5YBR289W RPS10AQ08745 105 aaPredicted RBP2.17□□□□□ -2.06
SNF5YBR289W ISN1Q99312 450 aa2.17□□□□□ -2.06
SNF5YBR289W YMR084WA2P2R3 262 aa2.16□□□□□ -2.06
SNF5YBR289W HSC82P15108 705 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W ELO2P25358 347 aa2.16□□□□□ -2.06
SNF5YBR289W NTR2P36118 322 aaPredicted RBP2.16□□□□□ -2.06
SNF5YBR289W AAP1P37898 856 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W YEL057CP39983 233 aa2.16□□□□□ -2.06
SNF5YBR289W THI6P41835 540 aa2.16□□□□□ -2.06
SNF5YBR289W PKP2P53170 491 aa2.16□□□□□ -2.06
SNF5YBR289W CBK1P53894 756 aa2.16□□□□□ -2.06
SNF5YBR289W RSC9Q03124 581 aa2.16□□□□□ -2.06
SNF5YBR289W RIX7Q07844 837 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W SWT1Q12104 458 aa2.16□□□□□ -2.06
SNF5YBR289W BAG7Q12128 409 aa2.16□□□□□ -2.06
SNF5YBR289W NMD4Q12129 218 aa2.16□□□□□ -2.06
SNF5YBR289W GET3Q12154 354 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W ADE5,7P07244 802 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W YCK1P23291 538 aa2.16□□□□□ -2.06
SNF5YBR289W RAD16P31244 790 aa2.16□□□□□ -2.06
SNF5YBR289W ALY1P36117 915 aa2.16□□□□□ -2.06
SNF5YBR289W FTH1P38310 465 aa2.16□□□□□ -2.06
SNF5YBR289W SGN1P40561 250 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SNF5YBR289W LYS14P40971 790 aa2.16□□□□□ -2.06
SNF5YBR289W GAT1P43574 510 aa2.16□□□□□ -2.06
SNF5YBR289W ADE13Q05911 482 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W SWA2Q06677 668 aa2.16□□□□□ -2.06
SNF5YBR289W OPY2Q06810 360 aa2.16□□□□□ -2.06
SNF5YBR289W MED1Q12321 566 aa2.16□□□□□ -2.06
SNF5YBR289W AHA1Q12449 350 aaKnown RBP2.16□□□□□ -2.06
SNF5YBR289W RRD2Q12461 358 aa2.16□□□□□ -2.06
SNF5YBR289W RPN13O13563 156 aa2.15□□□□□ -2.06
SNF5YBR289W SEM1O94742 89 aa2.15□□□□□ -2.06
SNF5YBR289W PDE1P22434 369 aa2.15□□□□□ -2.06
SNF5YBR289W YCP4P25349 247 aaKnown RBP2.15□□□□□ -2.06
SNF5YBR289W RER1P25560 188 aa2.15□□□□□ -2.06
SNF5YBR289W LAC1P28496 418 aa2.15□□□□□ -2.06
SNF5YBR289W PIH1P38768 344 aa2.15□□□□□ -2.06
SNF5YBR289W YJL107CP42947 387 aa2.15□□□□□ -2.06
SNF5YBR289W YFR020WP43600 232 aa2.15□□□□□ -2.06
SNF5YBR289W NMD5P46970 1048 aa2.15□□□□□ -2.06
SNF5YBR289W YPL108WQ02872 168 aaPredicted RBP2.15□□□□□ -2.06
SNF5YBR289W RAD30Q04049 632 aa2.15□□□□□ -2.06
SNF5YBR289W TAF11Q04226 346 aa2.15□□□□□ -2.06
SNF5YBR289W YLR455WQ06188 304 aa2.15□□□□□ -2.06
SNF5YBR289W CRT10Q08226 957 aa2.15□□□□□ -2.06
SNF5YBR289W LEA1Q08963 238 aaPredicted RBP2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms