RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W TAF9Q05027 157 aa3.52□□□□□ -1.85
NUP60YAR002W THI7Q05998 598 aa3.52□□□□□ -1.85
NUP60YAR002W KAP95Q06142 861 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W YPL225WQ08971 146 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W FAP7Q12055 197 aaPredicted RBP3.52□□□□□ -1.85
NUP60YAR002W YPR027CQ12079 277 aa3.52□□□□□ -1.85
NUP60YAR002W YLR125WQ12138 136 aa3.52□□□□□ -1.85
NUP60YAR002W RRD2Q12461 358 aa3.52□□□□□ -1.85
NUP60YAR002W CMD1P06787 147 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W CHS1P08004 1131 aa3.51□□□□□ -1.85
NUP60YAR002W CDC24P11433 854 aaPredicted RBP3.51□□□□□ -1.85
NUP60YAR002W VBA3P25594 458 aa3.51□□□□□ -1.85
NUP60YAR002W PEX2P32800 271 aa3.51□□□□□ -1.85
NUP60YAR002W RRP14P36080 434 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W ABZ1P37254 787 aaPredicted RBP3.51□□□□□ -1.85
NUP60YAR002W GIC1P38785 314 aa3.51□□□□□ -1.85
NUP60YAR002W ECM1P39715 212 aa3.51□□□□□ -1.85
NUP60YAR002W MKT1P40850 830 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W YNL247WP53852 767 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W ALG11P53954 548 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W COG6P53959 839 aa3.51□□□□□ -1.85
NUP60YAR002W YNL040WP53960 456 aaPredicted RBP3.51□□□□□ -1.85
NUP60YAR002W VPS72Q03388 795 aa3.51□□□□□ -1.85
NUP60YAR002W MZM1Q03429 123 aaPredicted RBP3.51□□□□□ -1.85
NUP60YAR002W SNU56Q03782 492 aaKnown RBP3.51□□□□□ -1.85
NUP60YAR002W ARO80Q04052 950 aa3.51□□□□□ -1.85
NUP60YAR002W CDD1Q06549 142 aa3.51□□□□□ -1.85
NUP60YAR002W AIM39Q08223 395 aa3.51□□□□□ -1.85
NUP60YAR002W YPR071WQ12346 211 aa3.51□□□□□ -1.85
NUP60YAR002W EMP46Q12396 444 aa3.51□□□□□ -1.85
NUP60YAR002W PCD1Q12524 340 aa3.51□□□□□ -1.85
NUP60YAR002W TOM1Q03280 3268 aa3.51□□□□□ -1.85
NUP60YAR002W ADE4P04046 510 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W ADE2P21264 571 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W SLY1P22213 666 aa3.5□□□□□ -1.85
NUP60YAR002W SAT4P25333 603 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W KAR4P25583 335 aa3.5□□□□□ -1.85
NUP60YAR002W MEI4P29467 408 aa3.5□□□□□ -1.85
NUP60YAR002W RPC82P32349 654 aa3.5□□□□□ -1.85
NUP60YAR002W BCS1P32839 456 aa3.5□□□□□ -1.85
NUP60YAR002W REC104P33323 182 aa3.5□□□□□ -1.85
NUP60YAR002W BET3P36149 193 aa3.5□□□□□ -1.85
NUP60YAR002W AGP2P38090 596 aa3.5□□□□□ -1.85
NUP60YAR002W YBR062CP38239 180 aa3.5□□□□□ -1.85
NUP60YAR002W MED8P38304 223 aa3.5□□□□□ -1.85
NUP60YAR002W TSL1P38427 1098 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W MSR1P38714 643 aa3.5□□□□□ -1.85
NUP60YAR002W YAP1801P38856 637 aa3.5□□□□□ -1.85
NUP60YAR002W FLC2P39719 783 aa3.5□□□□□ -1.85
NUP60YAR002W SAW1P39735 261 aa3.5□□□□□ -1.85
NUP60YAR002W YER158CP40095 573 aa3.5□□□□□ -1.85
NUP60YAR002W YER186CP40101 306 aa3.5□□□□□ -1.85
NUP60YAR002W RPT2P40327 437 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W YIL054WP40524 105 aa3.5□□□□□ -1.85
NUP60YAR002W SKP2P42843 763 aa3.5□□□□□ -1.85
NUP60YAR002W TDA10P42938 290 aa3.5□□□□□ -1.85
NUP60YAR002W LAM5P43560 674 aa3.5□□□□□ -1.85
NUP60YAR002W UBP6P43593 499 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W ASG7P46993 209 aa3.5□□□□□ -1.85
NUP60YAR002W RTA1P53047 317 aa3.5□□□□□ -1.85
NUP60YAR002W DAK1P54838 584 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W ADA2Q02336 434 aa3.5□□□□□ -1.85
NUP60YAR002W SIZ1Q04195 904 aa3.5□□□□□ -1.85
NUP60YAR002W DIS3Q08162 1001 aaKnown RBP3.5□□□□□ -1.85
NUP60YAR002W CIR2Q08822 631 aa3.5□□□□□ -1.85
NUP60YAR002W ICL2Q12031 575 aa3.5□□□□□ -1.85
NUP60YAR002W CTF3Q12748 733 aa3.5□□□□□ -1.85
NUP60YAR002W VPS5Q92331 675 aa3.5□□□□□ -1.85
NUP60YAR002W ILS1P09436 1072 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W ERR1P0CX10 437 aa3.49□□□□□ -1.85
NUP60YAR002W ERR2P0CX11 437 aa3.49□□□□□ -1.85
NUP60YAR002W YPK1P12688 680 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W TOP3P13099 656 aa3.49□□□□□ -1.85
NUP60YAR002W MSD1P15179 658 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W ARG1P22768 420 aa3.49□□□□□ -1.85
NUP60YAR002W NPP1P25353 742 aa3.49□□□□□ -1.85
NUP60YAR002W NIP1P32497 812 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W AFR1P33304 620 aa3.49□□□□□ -1.85
NUP60YAR002W SRB2P34162 210 aa3.49□□□□□ -1.85
NUP60YAR002W SET3P36124 751 aa3.49□□□□□ -1.85
NUP60YAR002W POL12P38121 705 aaPredicted RBP3.49□□□□□ -1.85
NUP60YAR002W HEK2P38199 381 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
NUP60YAR002W YBR032WP38223 100 aa3.49□□□□□ -1.85
NUP60YAR002W SPC97P38863 823 aa3.49□□□□□ -1.85
NUP60YAR002W LYS9P38999 446 aa3.49□□□□□ -1.85
NUP60YAR002W ERP2P39704 215 aa3.49□□□□□ -1.85
NUP60YAR002W DSE1P40077 573 aa3.49□□□□□ -1.85
NUP60YAR002W SAE2P46946 345 aa3.49□□□□□ -1.85
NUP60YAR002W ALY2P47029 1046 aa3.49□□□□□ -1.85
NUP60YAR002W NOP13P53883 403 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
NUP60YAR002W KTR5P53966 522 aaPredicted RBP3.49□□□□□ -1.85
NUP60YAR002W SUB1P54000 292 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W MUK1Q02866 612 aa3.49□□□□□ -1.85
NUP60YAR002W ELP3Q02908 557 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W YDR338CQ05497 695 aa3.49□□□□□ -1.85
NUP60YAR002W CMS1Q07897 291 aaKnown RBP3.49□□□□□ -1.85
NUP60YAR002W YOR352WQ08816 343 aa3.49□□□□□ -1.85
NUP60YAR002W VPS54Q12071 889 aa3.49□□□□□ -1.85
NUP60YAR002W AVL9Q12500 764 aa3.49□□□□□ -1.85
NUP60YAR002W RTP1Q12751 981 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms