RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	NBP2	Q12163	236 aa		5.3	□□□□□ -1.56
ECM1	YAL059W	MDY2	Q12285	212 aa		5.3	□□□□□ -1.56
ECM1	YAL059W	SKS1	Q12505	502 aa		5.3	□□□□□ -1.56
ECM1	YAL059W	RPL19A	P0CX82	189 aa	Known RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	RPL19B	P0CX83	189 aa	Predicted RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	CDC24	P11433	854 aa	Predicted RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
ECM1	YAL059W	PWP1	P21304	576 aa	Known RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	CLB1	P24868	471 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	NIP1	P32497	812 aa	Known RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	GYP6	P32806	458 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	THI6	P41835	540 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
ECM1	YAL059W	NOP9	P47077	666 aa	Known RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	DSD1	P53095	428 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	NOP15	P53927	220 aa	Predicted RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	RCN2	Q12044	265 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	RTK1	Q12100	620 aa	Predicted RBP	5.29	□□□□□ -1.56
ECM1	YAL059W	YRF1-4	O13559	1382 aa		5.29	□□□□□ -1.56
ECM1	YAL059W	APE1	P14904	514 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
ECM1	YAL059W	RIT1	P23796	513 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	VPS17	P32913	551 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	YBL029W	P38201	376 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	SIF2	P38262	535 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	PCL5	P38794	229 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
ECM1	YAL059W	REV7	P38927	245 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	BEM4	P39011	633 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	OSW5	P40219	148 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	MKT1	P40850	830 aa	Known RBP	5.28	□□□□□ -1.56
ECM1	YAL059W	LAM5	P43560	674 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	AGX1	P43567	385 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	ARC1	P46672	376 aa	Known RBP	5.28	□□□□□ -1.56
ECM1	YAL059W	SIP4	P46954	829 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	ENP2	P48234	707 aa	Known RBP	5.28	□□□□□ -1.56
ECM1	YAL059W	PAN2	P53010	1115 aa	Predicted RBP	5.28	□□□□□ -1.56
ECM1	YAL059W	YNR068C	P53754	272 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	TOF1	P53840	1238 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	YSA1	Q01976	231 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	RRN5	Q02983	363 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	SPH1	Q06160	661 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	YLR456W	Q06199	204 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	ARV1	Q06541	321 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	HBT1	Q07653	1046 aa	Known RBP	5.28	□□□□□ -1.56
ECM1	YAL059W	COX17	Q12287	69 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	YOL159C-A	Q3E769	90 aa		5.28	□□□□□ -1.56
ECM1	YAL059W	YLR302C	O13544	120 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	RPS17A	P02407	136 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	SIR3	P06701	978 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	ADE3	P07245	946 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	RNA1	P11745	407 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	RPS17B	P14127	136 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	CLB3	P24870	427 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	IMG2	P25642	146 aa	Predicted RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	HSM3	P38348	480 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	SFB3	P38810	929 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	EFM4	P40516	257 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	MAD2	P40958	196 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	AIP1	P46680	615 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	CUL3	P53202	744 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	TMN2	Q04562	672 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	YLR407W	Q06070	228 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	YSH1	Q06224	779 aa	Predicted RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	SKG3	Q06315	1026 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	CIR2	Q08822	631 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	BMS1	Q08965	1183 aa	Known RBP	5.27	□□□□□ -1.57
ECM1	YAL059W	GRX6	Q12438	231 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	SEC39	Q12745	709 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	YKL033W-A	Q86ZR7	236 aa		5.27	□□□□□ -1.57
ECM1	YAL059W	PCK1	P10963	549 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	PET123	P17558	318 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	PRE8	P23639	250 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	MSP1	P28737	362 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	MIC60	P36112	540 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	FLC2	P39719	783 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	SDS3	P40505	327 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	NUP84	P52891	726 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	SNF12	P53628	566 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	YMR210W	Q03649	449 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	ECM22	Q05958	814 aa	Predicted RBP	5.26	□□□□□ -1.57
ECM1	YAL059W	THI22	Q06490	572 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	SPE3	Q12074	293 aa	Known RBP	5.26	□□□□□ -1.57
ECM1	YAL059W	DIN7	Q12086	430 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	GPM3	Q12326	303 aa		5.26	□□□□□ -1.57
ECM1	YAL059W	YML002W	P0CF17	737 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	CBS1	P14066	229 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	MER1	P16523	270 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	PEX1	P24004	1043 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	SUR1	P33300	382 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	OTU2	P38747	307 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	FSH1	P38777	243 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	YHR097C	P38809	366 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	SMC2	P38989	1170 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	PSD1	P39006	500 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	NAS2	P40555	220 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	IMA1	P53051	589 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	MNT2	P53059	558 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	GND2	P53319	492 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	TAP42	Q04372	366 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms