RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Pet100P0DJE0 76 aa4.32□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 C130032M10RikQ8C888 123 aa4.32□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 Mrpl34Q99N91 92 aa4.32□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 Gm44790A0A0N4SV91 103 aa4.31□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 Hist1h4aP62806 103 aaKnown RBP4.31□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 Defb38Q7TNV7 63 aa4.31□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 BatfO35284 125 aa4.29□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 Phxr4P15974 95 aa4.26□□□□□ -1.73
Hmgb1-202ENSMUST00000093196 Ndufc1Q9CQY9 76 aa4.24□□□□□ -1.73
Hmgb1-202ENSMUST00000093196 Gm10267M0QWD8 85 aa4.23□□□□□ -1.73
Hmgb1-202ENSMUST00000093196 Syne1Q6ZWR6 8799 aa4.23□□□□□ -1.73
Hmgb1-202ENSMUST00000093196 Krtap19-4Q925H7 84 aa4.21□□□□□ -1.74
Hmgb1-202ENSMUST00000093196 Fam229bQ8CF36 80 aa4.18□□□□□ -1.74
Hmgb1-202ENSMUST00000093196 Serp2Q6TAW2 65 aa4.17□□□□□ -1.74
Hmgb1-202ENSMUST00000093196 4930518I15RikQ3V2W7 57 aa4.16□□□□□ -1.74
Hmgb1-202ENSMUST00000093196 Gm12216A0A1W2P827 62 aa4.15□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 Prr15lQ8JZM2 100 aa4.15□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 Defb13Q8R2I4 64 aa4.15□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 Gm4491E0CX42 125 aa4.12□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 BikO70337 150 aa4.12□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 Ndufs5Q99LY9 106 aa4.12□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 A0A286YE49 62 aa4.11□□□□□ -1.75
Hmgb1-202ENSMUST00000093196 Spink8Q09TK9 105 aa4.08□□□□□ -1.76
Hmgb1-202ENSMUST00000093196 Naa38Q9D2U5 125 aa4.07□□□□□ -1.76
Hmgb1-202ENSMUST00000093196 Samd13D3YUG0 102 aa4.06□□□□□ -1.76
Hmgb1-202ENSMUST00000093196 CriptO70333 101 aa4.02□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 Spint4Q9D263 159 aa4.02□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 Atox1O08997 68 aaKnown RBP4□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 B230307C23RikQ8BLB2 64 aa4□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 Lce3bQ9CQM7 98 aa3.98□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 Tmem258P61166 79 aa3.97□□□□□ -1.77
Hmgb1-202ENSMUST00000093196 Spink7Q6IE32 76 aa3.96□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Gm4559A4IF42 199 aa3.95□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Lce3fQ6PAI4 98 aa3.95□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Lce3cQ91V05 98 aa3.95□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Defb1P56386 69 aa3.94□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Rps28P62858 69 aaKnown RBP3.94□□□□□ -1.78
Hmgb1-202ENSMUST00000093196 Gm20537G3UYK7 97 aa3.9□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Coa5Q99M07 74 aa3.9□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Gm21798J3QNU5 87 aa3.88□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Cdc42se1Q8BHL7 80 aa3.87□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 SnurfQ9WU12 71 aa3.86□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Gm10229O08631 77 aa3.85□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Serp1Q9Z1W5 66 aa3.85□□□□□ -1.79
Hmgb1-202ENSMUST00000093196 Gm10999F6Q4M4 69 aa3.83□□□□□ -1.8
Hmgb1-202ENSMUST00000093196 Smim20D3Z7Q2 69 aa3.82□□□□□ -1.8
Hmgb1-202ENSMUST00000093196 Gm11938Q9D3H4 131 aa3.81□□□□□ -1.8
Hmgb1-202ENSMUST00000093196 Brk1Q91VR8 75 aa3.73□□□□□ -1.81
Hmgb1-202ENSMUST00000093196 Gm20661K7N787 53 aa3.71□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 Mt1P02802 61 aaKnown RBP3.7□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 Cox6b2Q80ZN9 88 aa3.69□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 Uqcr11Q9CPX8 56 aa3.68□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 BC029722A0A0N4SW31 51 aa3.67□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 SptssbQ925E8 76 aa3.66□□□□□ -1.82
Hmgb1-202ENSMUST00000093196 Ndufb1P0DN34 57 aa3.61□□□□□ -1.83
Hmgb1-202ENSMUST00000093196 Gm10382Q3V0T5 144 aa3.58□□□□□ -1.84
Hmgb1-202ENSMUST00000093196 4933415A04RikQ9D443 101 aa3.57□□□□□ -1.84
Hmgb1-202ENSMUST00000093196 Gm17606F6ZL36 78 aa3.55□□□□□ -1.84
Hmgb1-202ENSMUST00000093196 Sprr2hO70559 108 aa3.5□□□□□ -1.85
Hmgb1-202ENSMUST00000093196 Krtap5-1Q64507 230 aa3.49□□□□□ -1.85
Hmgb1-202ENSMUST00000093196 Krtap19-9bQ99NG9 58 aa3.45□□□□□ -1.86
Hmgb1-202ENSMUST00000093196 Gm10024A0A0A0MQA4 119 aa3.44□□□□□ -1.86
Hmgb1-202ENSMUST00000093196 Gm9955Q8CEJ8 102 aa3.43□□□□□ -1.86
Hmgb1-202ENSMUST00000093196 Lce3eF8VQJ0 98 aa3.42□□□□□ -1.86
Hmgb1-202ENSMUST00000093196 Gm17402F6Z0L5 76 aa3.41□□□□□ -1.86
Hmgb1-202ENSMUST00000093196 Sprr2a3Q4KL71 83 aa3.39□□□□□ -1.87
Hmgb1-202ENSMUST00000093196 Sprr2a1Q9CQK8 83 aa3.39□□□□□ -1.87
Hmgb1-202ENSMUST00000093196 Muc16A0A140LJ72 8478 aa3.38□□□□□ -1.87
Hmgb1-202ENSMUST00000093196 ObscnA2AAJ9 8891 aaKnown RBP3.37□□□□□ -1.87
Hmgb1-202ENSMUST00000093196 Romo1P60603 79 aa3.24□□□□□ -1.89
Hmgb1-202ENSMUST00000093196 Gm3880A0A1B0GSB3 72 aa3.2□□□□□ -1.9
Hmgb1-202ENSMUST00000093196 Krtap6-5Q925H3 78 aa3.09□□□□□ -1.91
Hmgb1-202ENSMUST00000093196 Sprr2eO70556 76 aa3.07□□□□□ -1.92
Hmgb1-202ENSMUST00000093196 Tnp1P10856 55 aa2.73□□□□□ -1.97
Hmgb1-202ENSMUST00000093196 1110025L11RikO09048 78 aa2.7□□□□□ -1.98
Hmgb1-202ENSMUST00000093196 Krtap21-1Q925H4 128 aa2.7□□□□□ -1.98
Hmgb1-202ENSMUST00000093196 Sprr2bO70554 98 aa2.64□□□□□ -1.99
Hmgb1-202ENSMUST00000093196 Krtap6-2O08884 159 aa2.62□□□□□ -1.99
Hmgb1-202ENSMUST00000093196 Sprr2dO70555 85 aa2.43□□□□□ -2.02
Hmgb1-202ENSMUST00000093196 Phgr1Q8K0G7 91 aa1.58□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 66.5 ms