RNA–Protein interactions for RNA: ENSMUST00000048065.5

Trem3-201, Transcript of TREM-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem3, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3-201ENSMUST00000048065 Cdc42se1Q8BHL7 80 aa5.03□□□□□ -1.6
Trem3-201ENSMUST00000048065 H2al1bA0A087WP11 105 aa4.98□□□□□ -1.61
Trem3-201ENSMUST00000048065 Sprr2gO70558 76 aa4.96□□□□□ -1.62
Trem3-201ENSMUST00000048065 Phxr4P15974 95 aa4.95□□□□□ -1.62
Trem3-201ENSMUST00000048065 Ndufb1P0DN34 57 aa4.93□□□□□ -1.62
Trem3-201ENSMUST00000048065 Tmem258P61166 79 aa4.93□□□□□ -1.62
Trem3-201ENSMUST00000048065 Krtap20-2E9Q0A8 60 aa4.89□□□□□ -1.63
Trem3-201ENSMUST00000048065 Krtap19-9bQ99NG9 58 aa4.88□□□□□ -1.63
Trem3-201ENSMUST00000048065 Gm19935A0A1B0GSF9 52 aa4.87□□□□□ -1.63
Trem3-201ENSMUST00000048065 Camk2n1Q6QWF9 78 aa4.85□□□□□ -1.63
Trem3-201ENSMUST00000048065 2310046K23RikA0A0A6YVW6 87 aa4.81□□□□□ -1.64
Trem3-201ENSMUST00000048065 Pcp4P63054 62 aa4.8□□□□□ -1.64
Trem3-201ENSMUST00000048065 Brk1Q91VR8 75 aa4.73□□□□□ -1.65
Trem3-201ENSMUST00000048065 Eppk1Q8R0W0 6548 aa4.71□□□□□ -1.65
Trem3-201ENSMUST00000048065 Sprr2iO70560 76 aa4.6□□□□□ -1.67
Trem3-201ENSMUST00000048065 Gm3880A0A1B0GSB3 72 aa4.58□□□□□ -1.68
Trem3-201ENSMUST00000048065 Krtap5-2Q9D5Z7 189 aa4.58□□□□□ -1.68
Trem3-201ENSMUST00000048065 Gm10142J3KMP7 120 aa4.57□□□□□ -1.68
Trem3-201ENSMUST00000048065 Gm4553A0A1B0GSA9 284 aa4.55□□□□□ -1.68
Trem3-201ENSMUST00000048065 H2al1kJ3QP08 105 aa4.54□□□□□ -1.68
Trem3-201ENSMUST00000048065 H2al1mQ9DAD9 105 aa4.54□□□□□ -1.68
Trem3-201ENSMUST00000048065 Gm11639A0A1D5RLM8 5808 aa4.54□□□□□ -1.68
Trem3-201ENSMUST00000048065 Syne1Q6ZWR6 8799 aa4.5□□□□□ -1.69
Trem3-201ENSMUST00000048065 Rps28P62858 69 aaKnown RBP4.48□□□□□ -1.69
Trem3-201ENSMUST00000048065 Lce3bQ9CQM7 98 aa4.46□□□□□ -1.7
Trem3-201ENSMUST00000048065 Gm10272F7CZ33 110 aa4.45□□□□□ -1.7
Trem3-201ENSMUST00000048065 Macf1Q9QXZ0 7354 aaKnown RBP4.44□□□□□ -1.7
Trem3-201ENSMUST00000048065 Gm11568A2A4M2 211 aa4.44□□□□□ -1.7
Trem3-201ENSMUST00000048065 Krtap9-1Q64526 186 aa4.44□□□□□ -1.7
Trem3-201ENSMUST00000048065 Kmt2dQ6PDK2 5588 aa4.42□□□□□ -1.7
Trem3-201ENSMUST00000048065 Gm12216A0A1W2P827 62 aa4.41□□□□□ -1.7
Trem3-201ENSMUST00000048065 Krtap7-1Q9D3I6 87 aa4.4□□□□□ -1.71
Trem3-201ENSMUST00000048065 Gpr98Q8VHN7 6298 aaKnown RBP4.39□□□□□ -1.71
Trem3-201ENSMUST00000048065 Ndufs5Q99LY9 106 aa4.3□□□□□ -1.72
Trem3-201ENSMUST00000048065 Romo1P60603 79 aa4.25□□□□□ -1.73
Trem3-201ENSMUST00000048065 Krtap5-1Q64507 230 aa4.25□□□□□ -1.73
Trem3-201ENSMUST00000048065 Muc19Q6PZE0 7524 aa4.23□□□□□ -1.73
Trem3-201ENSMUST00000048065 SvipQ3UZP4 77 aa4.18□□□□□ -1.74
Trem3-201ENSMUST00000048065 Gm7579A0A1B0GRJ4 243 aa4.17□□□□□ -1.74
Trem3-201ENSMUST00000048065 Mt3P28184 68 aa4.16□□□□□ -1.74
Trem3-201ENSMUST00000048065 4933415A04RikQ9D443 101 aa4.15□□□□□ -1.75
Trem3-201ENSMUST00000048065 Hmcn1D3YXG0 5634 aa4.14□□□□□ -1.75
Trem3-201ENSMUST00000048065 Tnp1P10856 55 aa4.13□□□□□ -1.75
Trem3-201ENSMUST00000048065 Gm4559A4IF42 199 aa4.11□□□□□ -1.75
Trem3-201ENSMUST00000048065 Gm11938Q9D3H4 131 aa4.11□□□□□ -1.75
Trem3-201ENSMUST00000048065 Krtap19-4Q925H7 84 aa4.1□□□□□ -1.75
Trem3-201ENSMUST00000048065 Mt1P02802 61 aaKnown RBP4.08□□□□□ -1.76
Trem3-201ENSMUST00000048065 Gm40460A0A1B0GR10 244 aa4.02□□□□□ -1.77
Trem3-201ENSMUST00000048065 Krtap5-5Q2TA51 241 aa4.02□□□□□ -1.77
Trem3-201ENSMUST00000048065 Gm3646F6S692 53 aa3.99□□□□□ -1.77
Trem3-201ENSMUST00000048065 Lce3cQ91V05 98 aa3.98□□□□□ -1.77
Trem3-201ENSMUST00000048065 Gm40193A0A1B0GT39 78 aa3.96□□□□□ -1.78
Trem3-201ENSMUST00000048065 NebE9Q1W3 7152 aa3.95□□□□□ -1.78
Trem3-201ENSMUST00000048065 DstQ91ZU6 7393 aaKnown RBP3.95□□□□□ -1.78
Trem3-201ENSMUST00000048065 Lce3dE9Q8V1 98 aa3.91□□□□□ -1.78
Trem3-201ENSMUST00000048065 Krtap4-16Q91W93 202 aa3.81□□□□□ -1.8
Trem3-201ENSMUST00000048065 ObscnA2AAJ9 8891 aaKnown RBP3.8□□□□□ -1.8
Trem3-201ENSMUST00000048065 Lce3eF8VQJ0 98 aa3.78□□□□□ -1.8
Trem3-201ENSMUST00000048065 Lce3fQ6PAI4 98 aa3.78□□□□□ -1.8
Trem3-201ENSMUST00000048065 Sprr2fO70557 76 aa3.77□□□□□ -1.81
Trem3-201ENSMUST00000048065 Gm10337F7DEP7 55 aa3.73□□□□□ -1.81
Trem3-201ENSMUST00000048065 AhnakE9Q616 5656 aaKnown RBP3.72□□□□□ -1.81
Trem3-201ENSMUST00000048065 4933428G20RikQ9D3X4 101 aa3.71□□□□□ -1.82
Trem3-201ENSMUST00000048065 Lce3aQ497I5 98 aa3.62□□□□□ -1.83
Trem3-201ENSMUST00000048065 Sprr2dO70555 85 aa3.54□□□□□ -1.84
Trem3-201ENSMUST00000048065 Mp68P56379 58 aa3.44□□□□□ -1.86
Trem3-201ENSMUST00000048065 Gm20538F6Z9R1 75 aa3.43□□□□□ -1.86
Trem3-201ENSMUST00000048065 Sprr2eO70556 76 aa3.38□□□□□ -1.87
Trem3-201ENSMUST00000048065 Gm10024A0A0A0MQA4 119 aa3.25□□□□□ -1.89
Trem3-201ENSMUST00000048065 Sprr2hO70559 108 aa3.05□□□□□ -1.92
Trem3-201ENSMUST00000048065 Muc16A0A140LJ72 8478 aa3□□□□□ -1.93
Trem3-201ENSMUST00000048065 Krtap6-5Q925H3 78 aa2.97□□□□□ -1.93
Trem3-201ENSMUST00000048065 1110025L11RikO09048 78 aa2.91□□□□□ -1.94
Trem3-201ENSMUST00000048065 Gm10229O08631 77 aa2.61□□□□□ -1.99
Trem3-201ENSMUST00000048065 Krtap6-2O08884 159 aa2.42□□□□□ -2.02
Trem3-201ENSMUST00000048065 Sprr2bO70554 98 aa2.4□□□□□ -2.03
Trem3-201ENSMUST00000048065 Ndufaf8A2AMZ4 74 aa2.39□□□□□ -2.03
Trem3-201ENSMUST00000048065 Krtap21-1Q925H4 128 aa2.33□□□□□ -2.04
Trem3-201ENSMUST00000048065 Gm9112A2AI92 75 aa2.09□□□□□ -2.07
Trem3-201ENSMUST00000048065 Phgr1Q8K0G7 91 aa1.91□□□□□ -2.1
Retrieved 80 of 22,080 RNA–protein pairs in 306 ms