RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Dnah7aE9Q0T8 4024 aa4.59□□□□□ -1.68
Cux1-204ENSMUST00000175975 Lce3bQ9CQM7 98 aa4.53□□□□□ -1.68
Cux1-204ENSMUST00000175975 Gm10100J3QK64 120 aa4.49□□□□□ -1.69
Cux1-204ENSMUST00000175975 Lce3cQ91V05 98 aa4.49□□□□□ -1.69
Cux1-204ENSMUST00000175975 Huwe1Q7TMY8 4377 aaKnown RBP4.47□□□□□ -1.69
Cux1-204ENSMUST00000175975 Krtap31-2Q8CAY5 177 aa4.39□□□□□ -1.71
Cux1-204ENSMUST00000175975 2310046K23RikA0A0A6YVW6 87 aa4.38□□□□□ -1.71
Cux1-204ENSMUST00000175975 Gm10142J3KMP7 120 aa4.38□□□□□ -1.71
Cux1-204ENSMUST00000175975 Lce3dE9Q8V1 98 aa4.37□□□□□ -1.71
Cux1-204ENSMUST00000175975 PrkdcP97313 4128 aa4.36□□□□□ -1.71
Cux1-204ENSMUST00000175975 Lce3eF8VQJ0 98 aa4.36□□□□□ -1.71
Cux1-204ENSMUST00000175975 Lce3fQ6PAI4 98 aa4.36□□□□□ -1.71
Cux1-204ENSMUST00000175975 Kmt2aP55200 3966 aa4.32□□□□□ -1.72
Cux1-204ENSMUST00000175975 TnxbO35452 4006 aa4.32□□□□□ -1.72
Cux1-204ENSMUST00000175975 Gm10272F7CZ33 110 aa4.31□□□□□ -1.72
Cux1-204ENSMUST00000175975 LorP18165 486 aa4.31□□□□□ -1.72
Cux1-204ENSMUST00000175975 Dnah6E9Q0B6 4144 aa4.31□□□□□ -1.72
Cux1-204ENSMUST00000175975 Fras1Q80T14 4010 aa4.3□□□□□ -1.72
Cux1-204ENSMUST00000175975 Dnah10D3YYQ8 4591 aa4.29□□□□□ -1.72
Cux1-204ENSMUST00000175975 Sprr2iO70560 76 aa4.27□□□□□ -1.73
Cux1-204ENSMUST00000175975 Lce3aQ497I5 98 aa4.25□□□□□ -1.73
Cux1-204ENSMUST00000175975 Sprr2fO70557 76 aa4.24□□□□□ -1.73
Cux1-204ENSMUST00000175975 Krtap31-1Q9D644 177 aa4.21□□□□□ -1.74
Cux1-204ENSMUST00000175975 Dnah14A0A140LIJ4 4489 aa4.18□□□□□ -1.74
Cux1-204ENSMUST00000175975 Gm10024A0A0A0MQA4 119 aa4.16□□□□□ -1.74
Cux1-204ENSMUST00000175975 Dnah1E9Q8T7 4250 aa4.09□□□□□ -1.76
Cux1-204ENSMUST00000175975 Krtap16-3Q8C1I6 86 aa4.06□□□□□ -1.76
Cux1-204ENSMUST00000175975 Sprr2eO70556 76 aa4.03□□□□□ -1.76
Cux1-204ENSMUST00000175975 Vps13dB1ART2 4390 aa4.03□□□□□ -1.76
Cux1-204ENSMUST00000175975 Lce1mQ9CR91 182 aa4□□□□□ -1.77
Cux1-204ENSMUST00000175975 Krtap22-2J3QNX6 67 aa4□□□□□ -1.77
Cux1-204ENSMUST00000175975 Gm38119A0A0A6YX29 146 aa3.99□□□□□ -1.77
Cux1-204ENSMUST00000175975 Krtap19-3Q925H6 87 aa3.99□□□□□ -1.77
Cux1-204ENSMUST00000175975 Pkhd1E9PZ36 4059 aa3.96□□□□□ -1.78
Cux1-204ENSMUST00000175975 Krtap9-5A2A5X3 358 aa3.95□□□□□ -1.78
Cux1-204ENSMUST00000175975 Lce1jD3YUU5 139 aa3.93□□□□□ -1.78
Cux1-204ENSMUST00000175975 Lce1gQ9D195 139 aa3.93□□□□□ -1.78
Cux1-204ENSMUST00000175975 Lce1iQ9D6P5 149 aa3.93□□□□□ -1.78
Cux1-204ENSMUST00000175975 Lce1hQ9D6R3 140 aa3.93□□□□□ -1.78
Cux1-204ENSMUST00000175975 Dync2h1Q45VK7 4306 aa3.93□□□□□ -1.78
Cux1-204ENSMUST00000175975 Lce1bQ9D149 137 aa3.92□□□□□ -1.78
Cux1-204ENSMUST00000175975 Krtap19-4Q925H7 84 aa3.92□□□□□ -1.78
Cux1-204ENSMUST00000175975 Mt2P02798 61 aa3.9□□□□□ -1.79
Cux1-204ENSMUST00000175975 Krtap19-2Q925I0 141 aa3.89□□□□□ -1.79
Cux1-204ENSMUST00000175975 Lce1fB9EJP6 147 aa3.89□□□□□ -1.79
Cux1-204ENSMUST00000175975 Lce1cQ9D1C5 147 aa3.89□□□□□ -1.79
Cux1-204ENSMUST00000175975 Lce1lQ9D1G7 135 aa3.89□□□□□ -1.79
Cux1-204ENSMUST00000175975 Lce1dQ9D731 133 aa3.89□□□□□ -1.79
Cux1-204ENSMUST00000175975 Lce1eQ9D139 143 aa3.87□□□□□ -1.79
Cux1-204ENSMUST00000175975 Prm1P02319 51 aa3.84□□□□□ -1.79
Cux1-204ENSMUST00000175975 Dnah2P0C6F1 4456 aa3.82□□□□□ -1.8
Cux1-204ENSMUST00000175975 Lrp1Q91ZX7 4545 aaKnown RBP3.81□□□□□ -1.8
Cux1-204ENSMUST00000175975 Pkhd1l1Q80ZA4 4249 aa3.8□□□□□ -1.8
Cux1-204ENSMUST00000175975 Dnah5Q8VHE6 4621 aa3.77□□□□□ -1.81
Cux1-204ENSMUST00000175975 Hectd4E9Q2E4 4418 aa3.76□□□□□ -1.81
Cux1-204ENSMUST00000175975 Krtap9-3Q3V2C1 136 aa3.76□□□□□ -1.81
Cux1-204ENSMUST00000175975 Dnah11E9Q7N9 4488 aa3.72□□□□□ -1.81
Cux1-204ENSMUST00000175975 Dnah9B1AR51 4484 aa3.72□□□□□ -1.81
Cux1-204ENSMUST00000175975 Stard9Q80TF6 4561 aa3.69□□□□□ -1.82
Cux1-204ENSMUST00000175975 Sprr2hO70559 108 aa3.69□□□□□ -1.82
Cux1-204ENSMUST00000175975 Mt3P28184 68 aa3.67□□□□□ -1.82
Cux1-204ENSMUST00000175975 ApobE9Q414 4505 aa3.65□□□□□ -1.82
Cux1-204ENSMUST00000175975 Pkd1O08852 4293 aa3.65□□□□□ -1.83
Cux1-204ENSMUST00000175975 Dnah17Q69Z23 4481 aa3.63□□□□□ -1.83
Cux1-204ENSMUST00000175975 Sprr2dO70555 85 aa3.6□□□□□ -1.83
Cux1-204ENSMUST00000175975 Krtap19-1Q925H2 87 aa3.59□□□□□ -1.83
Cux1-204ENSMUST00000175975 Fat1A0A1L1SQU7 4645 aa3.56□□□□□ -1.84
Cux1-204ENSMUST00000175975 PlecQ9QXS1 4691 aaKnown RBP3.53□□□□□ -1.84
Cux1-204ENSMUST00000175975 Mycbp2Q7TPH6 4711 aa3.51□□□□□ -1.85
Cux1-204ENSMUST00000175975 SacsQ9JLC8 4582 aa3.51□□□□□ -1.85
Cux1-204ENSMUST00000175975 Krtap1-3A2A588 173 aa3.51□□□□□ -1.85
Cux1-204ENSMUST00000175975 Gm7735D3YX18 52 aa3.51□□□□□ -1.85
Cux1-204ENSMUST00000175975 Mt4P47945 62 aa3.48□□□□□ -1.85
Cux1-204ENSMUST00000175975 Dync1h1Q9JHU4 4644 aaKnown RBP3.47□□□□□ -1.85
Cux1-204ENSMUST00000175975 Krtap4-2B1AQ85 167 aa3.46□□□□□ -1.86
Cux1-204ENSMUST00000175975 Dnah8Q91XQ0 4731 aa3.43□□□□□ -1.86
Cux1-204ENSMUST00000175975 Gm9789Q8BIG3 52 aa3.43□□□□□ -1.86
Cux1-204ENSMUST00000175975 Lrp1bQ9JI18 4599 aa3.4□□□□□ -1.87
Cux1-204ENSMUST00000175975 Ryr1E9PZQ0 5035 aa3.38□□□□□ -1.87
Cux1-204ENSMUST00000175975 Gm11569B1AQB1 180 aa3.36□□□□□ -1.87
Cux1-204ENSMUST00000175975 Gm10061D3Z714 54 aa3.36□□□□□ -1.87
Cux1-204ENSMUST00000175975 Gm11562A0PK51 136 aa3.36□□□□□ -1.87
Cux1-204ENSMUST00000175975 Gm11938Q9D3H4 131 aa3.34□□□□□ -1.87
Cux1-204ENSMUST00000175975 Fat2Q5F226 4351 aa3.34□□□□□ -1.87
Cux1-204ENSMUST00000175975 Fat3Q8BNA6 4555 aa3.32□□□□□ -1.88
Cux1-204ENSMUST00000175975 Krtap4-6Q3V4B7 195 aa3.3□□□□□ -1.88
Cux1-204ENSMUST00000175975 Sprr2bO70554 98 aa3.25□□□□□ -1.89
Cux1-204ENSMUST00000175975 Lce1a1Q9CQH5 143 aa3.19□□□□□ -1.9
Cux1-204ENSMUST00000175975 Lce1a2Q9D1K4 149 aa3.19□□□□□ -1.9
Cux1-204ENSMUST00000175975 Krtap17-1A2A5X6 109 aa3.13□□□□□ -1.91
Cux1-204ENSMUST00000175975 2300003K06RikA2A4M0 262 aa3.11□□□□□ -1.91
Cux1-204ENSMUST00000175975 Krtap4-7Q9D732 168 aa3.11□□□□□ -1.91
Cux1-204ENSMUST00000175975 Lce1kJ3QP15 125 aa3.1□□□□□ -1.91
Cux1-204ENSMUST00000175975 Gm11596B1AQB0 205 aa3.09□□□□□ -1.92
Cux1-204ENSMUST00000175975 Krtap4-1Q3UUY3 169 aa3.08□□□□□ -1.92
Cux1-204ENSMUST00000175975 Dnhd1D3Z2X2 4750 aa3.08□□□□□ -1.92
Cux1-204ENSMUST00000175975 Mt1P02802 61 aaKnown RBP3.07□□□□□ -1.92
Cux1-204ENSMUST00000175975 Krtap4-9B1AQA9 244 aa3.03□□□□□ -1.92
Cux1-204ENSMUST00000175975 Krtap4-13Q9D7P3 165 aa3.02□□□□□ -1.93
Cux1-204ENSMUST00000175975 Gm11564A2A4L9 201 aa3.02□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 164 ms