RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Dnah5Q8VHE6 4621 aa7.56□□□□□ -1.2
Sort1-203ENSMUST00000135636 Krtap19-9bQ99NG9 58 aa7.54□□□□□ -1.2
Sort1-203ENSMUST00000135636 Lce3bQ9CQM7 98 aa7.54□□□□□ -1.2
Sort1-203ENSMUST00000135636 Sprr2a3Q4KL71 83 aa7.49□□□□□ -1.21
Sort1-203ENSMUST00000135636 Sprr2a1Q9CQK8 83 aa7.49□□□□□ -1.21
Sort1-203ENSMUST00000135636 PrkdcP97313 4128 aa7.48□□□□□ -1.21
Sort1-203ENSMUST00000135636 Kmt2aP55200 3966 aa7.48□□□□□ -1.21
Sort1-203ENSMUST00000135636 Dnah11E9Q7N9 4488 aa7.48□□□□□ -1.21
Sort1-203ENSMUST00000135636 Vps13dB1ART2 4390 aa7.44□□□□□ -1.22
Sort1-203ENSMUST00000135636 Krtap9-5A2A5X3 358 aa7.43□□□□□ -1.22
Sort1-203ENSMUST00000135636 Dnah6E9Q0B6 4144 aa7.42□□□□□ -1.22
Sort1-203ENSMUST00000135636 Dnah3Q8BW94 4083 aa7.4□□□□□ -1.23
Sort1-203ENSMUST00000135636 Dnah7bL7N1Y0 4068 aa7.39□□□□□ -1.23
Sort1-203ENSMUST00000135636 Dnah17Q69Z23 4481 aa7.38□□□□□ -1.23
Sort1-203ENSMUST00000135636 Dnah1E9Q8T7 4250 aa7.38□□□□□ -1.23
Sort1-203ENSMUST00000135636 ApobE9Q414 4505 aa7.37□□□□□ -1.23
Sort1-203ENSMUST00000135636 Dnah2P0C6F1 4456 aa7.37□□□□□ -1.23
Sort1-203ENSMUST00000135636 Sprr2iO70560 76 aa7.33□□□□□ -1.24
Sort1-203ENSMUST00000135636 TnxbO35452 4006 aa7.33□□□□□ -1.24
Sort1-203ENSMUST00000135636 Dync2h1Q45VK7 4306 aa7.32□□□□□ -1.24
Sort1-203ENSMUST00000135636 Lce3cQ91V05 98 aa7.31□□□□□ -1.24
Sort1-203ENSMUST00000135636 PlecQ9QXS1 4691 aaKnown RBP7.3□□□□□ -1.24
Sort1-203ENSMUST00000135636 Gm10272F7CZ33 110 aa7.27□□□□□ -1.25
Sort1-203ENSMUST00000135636 Stard9Q80TF6 4561 aa7.22□□□□□ -1.25
Sort1-203ENSMUST00000135636 Dnah9B1AR51 4484 aa7.2□□□□□ -1.26
Sort1-203ENSMUST00000135636 Lce1jD3YUU5 139 aa7.17□□□□□ -1.26
Sort1-203ENSMUST00000135636 Lce1gQ9D195 139 aa7.17□□□□□ -1.26
Sort1-203ENSMUST00000135636 Lce1iQ9D6P5 149 aa7.17□□□□□ -1.26
Sort1-203ENSMUST00000135636 Lce1hQ9D6R3 140 aa7.17□□□□□ -1.26
Sort1-203ENSMUST00000135636 Sprr2fO70557 76 aa7.12□□□□□ -1.27
Sort1-203ENSMUST00000135636 Dnah7cA0A087WR13 4024 aa7.06□□□□□ -1.28
Sort1-203ENSMUST00000135636 Pkd1O08852 4293 aa7.06□□□□□ -1.28
Sort1-203ENSMUST00000135636 Fat1A0A1L1SQU7 4645 aa7.06□□□□□ -1.28
Sort1-203ENSMUST00000135636 Prm1P02319 51 aa7.03□□□□□ -1.28
Sort1-203ENSMUST00000135636 Lce3eF8VQJ0 98 aa7.02□□□□□ -1.28
Sort1-203ENSMUST00000135636 Lce3fQ6PAI4 98 aa7.02□□□□□ -1.28
Sort1-203ENSMUST00000135636 Krtap16-3Q8C1I6 86 aa7.01□□□□□ -1.29
Sort1-203ENSMUST00000135636 Lce3dE9Q8V1 98 aa7.01□□□□□ -1.29
Sort1-203ENSMUST00000135636 Krtap19-3Q925H6 87 aa6.99□□□□□ -1.29
Sort1-203ENSMUST00000135636 Dnah7aE9Q0T8 4024 aa6.98□□□□□ -1.29
Sort1-203ENSMUST00000135636 Vps13bQ80TY5 3993 aa6.92□□□□□ -1.3
Sort1-203ENSMUST00000135636 Dync1h1Q9JHU4 4644 aaKnown RBP6.92□□□□□ -1.3
Sort1-203ENSMUST00000135636 SacsQ9JLC8 4582 aa6.91□□□□□ -1.3
Sort1-203ENSMUST00000135636 Fras1Q80T14 4010 aa6.91□□□□□ -1.3
Sort1-203ENSMUST00000135636 Gm11569B1AQB1 180 aa6.85□□□□□ -1.31
Sort1-203ENSMUST00000135636 Krtap4-2B1AQ85 167 aa6.84□□□□□ -1.31
Sort1-203ENSMUST00000135636 Mycbp2Q7TPH6 4711 aa6.84□□□□□ -1.31
Sort1-203ENSMUST00000135636 Lrp1bQ9JI18 4599 aa6.84□□□□□ -1.31
Sort1-203ENSMUST00000135636 Lce1bQ9D149 137 aa6.83□□□□□ -1.32
Sort1-203ENSMUST00000135636 Gm10100J3QK64 120 aa6.82□□□□□ -1.32
Sort1-203ENSMUST00000135636 Gm7735D3YX18 52 aa6.81□□□□□ -1.32
Sort1-203ENSMUST00000135636 Mt2P02798 61 aa6.8□□□□□ -1.32
Sort1-203ENSMUST00000135636 Mt4P47945 62 aa6.8□□□□□ -1.32
Sort1-203ENSMUST00000135636 Lce3aQ497I5 98 aa6.8□□□□□ -1.32
Sort1-203ENSMUST00000135636 Krtap22-2J3QNX6 67 aa6.78□□□□□ -1.32
Sort1-203ENSMUST00000135636 Lce1fB9EJP6 147 aa6.76□□□□□ -1.33
Sort1-203ENSMUST00000135636 Lce1cQ9D1C5 147 aa6.76□□□□□ -1.33
Sort1-203ENSMUST00000135636 Lce1lQ9D1G7 135 aa6.76□□□□□ -1.33
Sort1-203ENSMUST00000135636 Lce1dQ9D731 133 aa6.76□□□□□ -1.33
Sort1-203ENSMUST00000135636 Krtap1-3A2A588 173 aa6.76□□□□□ -1.33
Sort1-203ENSMUST00000135636 Fat2Q5F226 4351 aa6.73□□□□□ -1.33
Sort1-203ENSMUST00000135636 Sprr2eO70556 76 aa6.68□□□□□ -1.34
Sort1-203ENSMUST00000135636 Gm9789Q8BIG3 52 aa6.64□□□□□ -1.35
Sort1-203ENSMUST00000135636 Gm10142J3KMP7 120 aa6.63□□□□□ -1.35
Sort1-203ENSMUST00000135636 Krtap19-1Q925H2 87 aa6.62□□□□□ -1.35
Sort1-203ENSMUST00000135636 Hectd4E9Q2E4 4418 aa6.61□□□□□ -1.35
Sort1-203ENSMUST00000135636 Krtap4-6Q3V4B7 195 aa6.61□□□□□ -1.35
Sort1-203ENSMUST00000135636 Fat3Q8BNA6 4555 aa6.6□□□□□ -1.35
Sort1-203ENSMUST00000135636 Lce1eQ9D139 143 aa6.58□□□□□ -1.36
Sort1-203ENSMUST00000135636 Krtap19-2Q925I0 141 aa6.57□□□□□ -1.36
Sort1-203ENSMUST00000135636 Gm10061D3Z714 54 aa6.55□□□□□ -1.36
Sort1-203ENSMUST00000135636 Ryr1E9PZQ0 5035 aa6.48□□□□□ -1.37
Sort1-203ENSMUST00000135636 Gm10024A0A0A0MQA4 119 aa6.48□□□□□ -1.37
Sort1-203ENSMUST00000135636 Lrp1Q91ZX7 4545 aaKnown RBP6.47□□□□□ -1.37
Sort1-203ENSMUST00000135636 Pkhd1E9PZ36 4059 aa6.37□□□□□ -1.39
Sort1-203ENSMUST00000135636 Krtap4-1Q3UUY3 169 aa6.27□□□□□ -1.41
Sort1-203ENSMUST00000135636 Gm11596B1AQB0 205 aa6.26□□□□□ -1.41
Sort1-203ENSMUST00000135636 Krtap19-4Q925H7 84 aa6.23□□□□□ -1.41
Sort1-203ENSMUST00000135636 Dnhd1D3Z2X2 4750 aa6.22□□□□□ -1.41
Sort1-203ENSMUST00000135636 Dnah8Q91XQ0 4731 aa6.21□□□□□ -1.41
Sort1-203ENSMUST00000135636 Krtap9-3Q3V2C1 136 aa6.21□□□□□ -1.42
Sort1-203ENSMUST00000135636 Lrp2A2ARV4 4660 aa6.16□□□□□ -1.42
Sort1-203ENSMUST00000135636 2300003K06RikA2A4M0 262 aa6.16□□□□□ -1.42
Sort1-203ENSMUST00000135636 Gm11564A2A4L9 201 aa6.13□□□□□ -1.43
Sort1-203ENSMUST00000135636 Gm11563B1AQ90 168 aa6.13□□□□□ -1.43
Sort1-203ENSMUST00000135636 Gm11595B1AQA7 289 aa6.13□□□□□ -1.43
Sort1-203ENSMUST00000135636 Krtap4-8B1AQA8 209 aa6.13□□□□□ -1.43
Sort1-203ENSMUST00000135636 Pkhd1l1Q80ZA4 4249 aa6.12□□□□□ -1.43
Sort1-203ENSMUST00000135636 Ryr3A2AGL3 4863 aa6.09□□□□□ -1.44
Sort1-203ENSMUST00000135636 Krtap4-7Q9D732 168 aa6.08□□□□□ -1.44
Sort1-203ENSMUST00000135636 Krtap4-9B1AQA9 244 aa6.06□□□□□ -1.44
Sort1-203ENSMUST00000135636 Krtap4-13Q9D7P3 165 aa6.01□□□□□ -1.45
Sort1-203ENSMUST00000135636 Sprr2hO70559 108 aa6.01□□□□□ -1.45
Sort1-203ENSMUST00000135636 Krtap17-1A2A5X6 109 aa5.88□□□□□ -1.47
Sort1-203ENSMUST00000135636 Herc2Q4U2R1 4836 aa5.87□□□□□ -1.47
Sort1-203ENSMUST00000135636 Kmt2cQ8BRH4 4903 aa5.83□□□□□ -1.48
Sort1-203ENSMUST00000135636 Ryr2E9Q401 4966 aaKnown RBP5.82□□□□□ -1.48
Sort1-203ENSMUST00000135636 Lce1a2Q9D1K4 149 aa5.79□□□□□ -1.48
Sort1-203ENSMUST00000135636 Lce1kJ3QP15 125 aa5.74□□□□□ -1.49
Sort1-203ENSMUST00000135636 Lce1a1Q9CQH5 143 aa5.69□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms