RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Gm21887J3QQ04 176 aa7.32□□□□□ -1.24
Hoxc4-201ENSMUST00000100164 RetnlbQ99P86 105 aa7.3□□□□□ -1.24
Hoxc4-201ENSMUST00000100164 Herc1E9PZP8 4859 aa7.29□□□□□ -1.24
Hoxc4-201ENSMUST00000100164 Fat2Q5F226 4351 aa7.29□□□□□ -1.24
Hoxc4-201ENSMUST00000100164 Gm10382Q3V0T5 144 aa7.28□□□□□ -1.24
Hoxc4-201ENSMUST00000100164 Lrp1Q91ZX7 4545 aaKnown RBP7.26□□□□□ -1.25
Hoxc4-201ENSMUST00000100164 Gm17606F6ZL36 78 aa7.24□□□□□ -1.25
Hoxc4-201ENSMUST00000100164 Rnase13Q5GAM7 153 aa7.16□□□□□ -1.26
Hoxc4-201ENSMUST00000100164 Gm5767A0A0J9YTU8 78 aa7.15□□□□□ -1.27
Hoxc4-201ENSMUST00000100164 Lrp2A2ARV4 4660 aa7.14□□□□□ -1.27
Hoxc4-201ENSMUST00000100164 Krtap4-1Q3UUY3 169 aa7.14□□□□□ -1.27
Hoxc4-201ENSMUST00000100164 Prm1P02319 51 aa7.12□□□□□ -1.27
Hoxc4-201ENSMUST00000100164 Ndufaf8A2AMZ4 74 aa7.06□□□□□ -1.28
Hoxc4-201ENSMUST00000100164 Gm7735D3YX18 52 aa7.05□□□□□ -1.28
Hoxc4-201ENSMUST00000100164 Krtap3-1A2A591 98 aa7.03□□□□□ -1.28
Hoxc4-201ENSMUST00000100164 Gm9789Q8BIG3 52 aa6.98□□□□□ -1.29
Hoxc4-201ENSMUST00000100164 Gm19426M0QWC7 77 aa6.96□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 Gm17416Q30KP4 66 aa6.96□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 A0A1Y7VJH8 109 aa6.95□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 Ush2AQ2QI47 5193 aa6.93□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 B930094E09RikQ8C4T2 136 aa6.92□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 Krtap7-1Q9D3I6 87 aa6.91□□□□□ -1.3
Hoxc4-201ENSMUST00000100164 4932415D10RikA0A1W2P6U8 4986 aa6.89□□□□□ -1.31
Hoxc4-201ENSMUST00000100164 Gm9736A0A1W2P7N1 277 aa6.88□□□□□ -1.31
Hoxc4-201ENSMUST00000100164 Gm40193A0A1B0GT39 78 aa6.85□□□□□ -1.31
Hoxc4-201ENSMUST00000100164 Sec61bQ9CQS8 96 aaKnown RBP6.85□□□□□ -1.31
Hoxc4-201ENSMUST00000100164 2210017I01RikA0A0A6YVV1 95 aa6.84□□□□□ -1.32
Hoxc4-201ENSMUST00000100164 Krtap15-1Q9QZU5 150 aa6.82□□□□□ -1.32
Hoxc4-201ENSMUST00000100164 Hmcn2A2AJ76 5100 aa6.8□□□□□ -1.32
Hoxc4-201ENSMUST00000100164 Fam229aB2KGE5 128 aa6.75□□□□□ -1.33
Hoxc4-201ENSMUST00000100164 Gm17402F6Z0L5 76 aa6.75□□□□□ -1.33
Hoxc4-201ENSMUST00000100164 Gm5965D3Z724 196 aa6.75□□□□□ -1.33
Hoxc4-201ENSMUST00000100164 Ubr4A2AN08 5180 aa6.74□□□□□ -1.33
Hoxc4-201ENSMUST00000100164 BC029722A0A0N4SW31 51 aa6.69□□□□□ -1.34
Hoxc4-201ENSMUST00000100164 Gm11555B1AQ89 175 aa6.68□□□□□ -1.34
Hoxc4-201ENSMUST00000100164 Gm11563B1AQ90 168 aa6.63□□□□□ -1.35
Hoxc4-201ENSMUST00000100164 Krtap4-7Q9D732 168 aa6.63□□□□□ -1.35
Hoxc4-201ENSMUST00000100164 Krtap28-10A0A1Y7VP58 119 aa6.62□□□□□ -1.35
Hoxc4-201ENSMUST00000100164 Gm19668J3QMD1 248 aa6.57□□□□□ -1.36
Hoxc4-201ENSMUST00000100164 Gm9112A2AI92 75 aa6.56□□□□□ -1.36
Hoxc4-201ENSMUST00000100164 Krtap13-1Q8K198 168 aa6.5□□□□□ -1.37
Hoxc4-201ENSMUST00000100164 Gm19402J3QJV4 266 aa6.49□□□□□ -1.37
Hoxc4-201ENSMUST00000100164 2310057N15RikQ9D6T8 200 aa6.48□□□□□ -1.37
Hoxc4-201ENSMUST00000100164 Krtap1-3A2A588 173 aa6.45□□□□□ -1.38
Hoxc4-201ENSMUST00000100164 Sprr2a3Q4KL71 83 aa6.44□□□□□ -1.38
Hoxc4-201ENSMUST00000100164 Sprr2a1Q9CQK8 83 aa6.44□□□□□ -1.38
Hoxc4-201ENSMUST00000100164 A0A1Y7VLE6 161 aa6.4□□□□□ -1.38
Hoxc4-201ENSMUST00000100164 ZanO88799 5376 aa6.4□□□□□ -1.38
Hoxc4-201ENSMUST00000100164 Krtap1-5A2A590 122 aa6.37□□□□□ -1.39
Hoxc4-201ENSMUST00000100164 Fat4Q2PZL6 4981 aa6.34□□□□□ -1.39
Hoxc4-201ENSMUST00000100164 Krtap28-13A0A087WQP5 138 aa6.3□□□□□ -1.4
Hoxc4-201ENSMUST00000100164 Gm11562A0PK51 136 aa6.28□□□□□ -1.4
Hoxc4-201ENSMUST00000100164 LorP18165 486 aa6.24□□□□□ -1.41
Hoxc4-201ENSMUST00000100164 Krtap17-1A2A5X6 109 aa6.24□□□□□ -1.41
Hoxc4-201ENSMUST00000100164 Crct1Q6PAI5 102 aa6.22□□□□□ -1.41
Hoxc4-201ENSMUST00000100164 Rnf213E9Q555 5152 aaKnown RBP6.2□□□□□ -1.42
Hoxc4-201ENSMUST00000100164 Spink7Q6IE32 76 aa6.19□□□□□ -1.42
Hoxc4-201ENSMUST00000100164 Camk2n1Q6QWF9 78 aa6.18□□□□□ -1.42
Hoxc4-201ENSMUST00000100164 A030005L19RikA0A1Y7VIU2 113 aa6.17□□□□□ -1.42
Hoxc4-201ENSMUST00000100164 Gm10061D3Z714 54 aa6.16□□□□□ -1.42
Hoxc4-201ENSMUST00000100164 Krtap19-3Q925H6 87 aa6.1□□□□□ -1.43
Hoxc4-201ENSMUST00000100164 A030005K14RikA0A1Y7VNY1 122 aa6.09□□□□□ -1.43
Hoxc4-201ENSMUST00000100164 Krtap19-1Q925H2 87 aa6.09□□□□□ -1.43
Hoxc4-201ENSMUST00000100164 Krtap16-3Q8C1I6 86 aa6.09□□□□□ -1.43
Hoxc4-201ENSMUST00000100164 Krtap1-4Q3V2D6 188 aa6.07□□□□□ -1.44
Hoxc4-201ENSMUST00000100164 Gm11569B1AQB1 180 aa6.04□□□□□ -1.44
Hoxc4-201ENSMUST00000100164 Tnp1P10856 55 aa6.02□□□□□ -1.45
Hoxc4-201ENSMUST00000100164 Gm7544A0A1Y7VJ58 118 aa6□□□□□ -1.45
Hoxc4-201ENSMUST00000100164 Krtap4-2B1AQ85 167 aa5.99□□□□□ -1.45
Hoxc4-201ENSMUST00000100164 SspoQ8CG65 4998 aa5.94□□□□□ -1.46
Hoxc4-201ENSMUST00000100164 Gm10318A0A1W2P728 225 aa5.93□□□□□ -1.46
Hoxc4-201ENSMUST00000100164 Lce1gQ9D195 139 aa5.9□□□□□ -1.46
Hoxc4-201ENSMUST00000100164 2310046K23RikA0A0A6YVW6 87 aa5.75□□□□□ -1.49
Hoxc4-201ENSMUST00000100164 Syne2Q6ZWQ0 6874 aaKnown RBP5.74□□□□□ -1.49
Hoxc4-201ENSMUST00000100164 Gm11596B1AQB0 205 aa5.65□□□□□ -1.51
Hoxc4-201ENSMUST00000100164 Krtap8-1O08633 61 aa5.58□□□□□ -1.52
Hoxc4-201ENSMUST00000100164 Muc5bE9Q5I3 4800 aa5.57□□□□□ -1.52
Hoxc4-201ENSMUST00000100164 Krtap19-9aF8WH65 55 aa5.56□□□□□ -1.52
Hoxc4-201ENSMUST00000100164 Krtap4-6Q3V4B7 195 aa5.55□□□□□ -1.52
Hoxc4-201ENSMUST00000100164 Lce1jD3YUU5 139 aa5.54□□□□□ -1.52
Hoxc4-201ENSMUST00000100164 Krtap19-2Q925I0 141 aa5.51□□□□□ -1.53
Hoxc4-201ENSMUST00000100164 Krtap12-1Q9Z287 130 aa5.51□□□□□ -1.53
Hoxc4-201ENSMUST00000100164 A0A1Y7VJ07 166 aa5.49□□□□□ -1.53
Hoxc4-201ENSMUST00000100164 Krtap9-5A2A5X3 358 aa5.49□□□□□ -1.53
Hoxc4-201ENSMUST00000100164 Krtap19-9bQ99NG9 58 aa5.44□□□□□ -1.54
Hoxc4-201ENSMUST00000100164 Mdn1A2ANY6 5589 aaKnown RBP5.42□□□□□ -1.54
Hoxc4-201ENSMUST00000100164 A030003K21RikA0A1Y7VIM3 128 aa5.38□□□□□ -1.55
Hoxc4-201ENSMUST00000100164 Gm11564A2A4L9 201 aa5.33□□□□□ -1.56
Hoxc4-201ENSMUST00000100164 Gm11595B1AQA7 289 aa5.33□□□□□ -1.56
Hoxc4-201ENSMUST00000100164 Krtap4-8B1AQA8 209 aa5.33□□□□□ -1.56
Hoxc4-201ENSMUST00000100164 Gm6358A0A087WPH4 74 aa5.28□□□□□ -1.56
Hoxc4-201ENSMUST00000100164 A030014E15RikA0A1Y7VJV2 120 aa5.27□□□□□ -1.57
Hoxc4-201ENSMUST00000100164 Krtap9-3Q3V2C1 136 aa5.25□□□□□ -1.57
Hoxc4-201ENSMUST00000100164 Lce1hQ9D6R3 140 aa5.22□□□□□ -1.57
Hoxc4-201ENSMUST00000100164 Lce1iQ9D6P5 149 aa5.22□□□□□ -1.57
Hoxc4-201ENSMUST00000100164 Lce1a2Q9D1K4 149 aa5.2□□□□□ -1.58
Hoxc4-201ENSMUST00000100164 Krtap4-9B1AQA9 244 aa5.16□□□□□ -1.58
Hoxc4-201ENSMUST00000100164 4933428G20RikQ9D3X4 101 aa5.15□□□□□ -1.59
Hoxc4-201ENSMUST00000100164 Lce1dQ9D731 133 aa5.15□□□□□ -1.59
Hoxc4-201ENSMUST00000100164 Sprr2gO70558 76 aa5.1□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms