RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Csmd3Q80T79 3707 aa3.98□□□□□ -1.77
Scn9a-201ENSMUST00000100063 TnxbO35452 4006 aa3.97□□□□□ -1.77
Scn9a-201ENSMUST00000100063 Lce3eF8VQJ0 98 aa3.96□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Lce3fQ6PAI4 98 aa3.96□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Gm38119A0A0A6YX29 146 aa3.94□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Gm10100J3QK64 120 aa3.93□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Gm10272F7CZ33 110 aa3.92□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Krtap9-5A2A5X3 358 aa3.9□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Dnah3Q8BW94 4083 aa3.9□□□□□ -1.78
Scn9a-201ENSMUST00000100063 Dnah7bL7N1Y0 4068 aa3.9□□□□□ -1.78
Scn9a-201ENSMUST00000100063 CubnQ9JLB4 3623 aa3.9□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Svep1A2AVA0 3567 aa3.89□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Prm1P02319 51 aa3.88□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Krtap16-3Q8C1I6 86 aa3.88□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Lce3aQ497I5 98 aa3.88□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Xirp2Q4U4S6 3784 aa3.84□□□□□ -1.79
Scn9a-201ENSMUST00000100063 Gm10142J3KMP7 120 aa3.83□□□□□ -1.8
Scn9a-201ENSMUST00000100063 PrkdcP97313 4128 aa3.81□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Lce1jD3YUU5 139 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Lce1gQ9D195 139 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Lce1iQ9D6P5 149 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Lce1hQ9D6R3 140 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Krtap22-2J3QNX6 67 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Dnah7cA0A087WR13 4024 aa3.8□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Vps13dB1ART2 4390 aa3.79□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Hspg2Q05793 3707 aaKnown RBP3.79□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Sprr2eO70556 76 aa3.79□□□□□ -1.8
Scn9a-201ENSMUST00000100063 Fras1Q80T14 4010 aa3.76□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Dnah5Q8VHE6 4621 aa3.75□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Lce1bQ9D149 137 aa3.75□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Krtap19-3Q925H6 87 aa3.75□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Dnah7aE9Q0T8 4024 aa3.75□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Mt2P02798 61 aa3.74□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Lce1fB9EJP6 147 aa3.73□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Lce1cQ9D1C5 147 aa3.73□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Lce1lQ9D1G7 135 aa3.73□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Lce1dQ9D731 133 aa3.73□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Dnah10D3YYQ8 4591 aa3.72□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Gm10024A0A0A0MQA4 119 aa3.72□□□□□ -1.81
Scn9a-201ENSMUST00000100063 Dnah14A0A140LIJ4 4489 aa3.68□□□□□ -1.82
Scn9a-201ENSMUST00000100063 Dnah1E9Q8T7 4250 aa3.65□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Gm7735D3YX18 52 aa3.64□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Lce1eQ9D139 143 aa3.64□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Kmt2aP55200 3966 aa3.6□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Dync2h1Q45VK7 4306 aa3.59□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Vps13bQ80TY5 3993 aa3.59□□□□□ -1.83
Scn9a-201ENSMUST00000100063 Dnah6E9Q0B6 4144 aa3.58□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Krtap19-4Q925H7 84 aa3.57□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Krtap19-2Q925I0 141 aa3.56□□□□□ -1.84
Scn9a-201ENSMUST00000100063 PlecQ9QXS1 4691 aaKnown RBP3.56□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Gm11569B1AQB1 180 aa3.55□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Ryr1E9PZQ0 5035 aa3.54□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Gm9789Q8BIG3 52 aa3.53□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Krtap19-1Q925H2 87 aa3.53□□□□□ -1.84
Scn9a-201ENSMUST00000100063 Stard9Q80TF6 4561 aa3.53□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Lrp1Q91ZX7 4545 aaKnown RBP3.52□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Krtap4-2B1AQ85 167 aa3.51□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Mt4P47945 62 aa3.51□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Fat1A0A1L1SQU7 4645 aa3.5□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Krtap9-3Q3V2C1 136 aa3.48□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Mycbp2Q7TPH6 4711 aa3.48□□□□□ -1.85
Scn9a-201ENSMUST00000100063 SacsQ9JLC8 4582 aa3.47□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Pkhd1E9PZ36 4059 aa3.47□□□□□ -1.85
Scn9a-201ENSMUST00000100063 Gm10061D3Z714 54 aa3.46□□□□□ -1.86
Scn9a-201ENSMUST00000100063 A0A1Y7VLE6 161 aa3.45□□□□□ -1.86
Scn9a-201ENSMUST00000100063 Pkd1O08852 4293 aa3.43□□□□□ -1.86
Scn9a-201ENSMUST00000100063 Dnah17Q69Z23 4481 aa3.43□□□□□ -1.86
Scn9a-201ENSMUST00000100063 Dnhd1D3Z2X2 4750 aa3.42□□□□□ -1.86
Scn9a-201ENSMUST00000100063 Krtap1-3A2A588 173 aa3.41□□□□□ -1.86
Scn9a-201ENSMUST00000100063 Dnah2P0C6F1 4456 aa3.4□□□□□ -1.87
Scn9a-201ENSMUST00000100063 Sprr2hO70559 108 aa3.4□□□□□ -1.87
Scn9a-201ENSMUST00000100063 Dnah9B1AR51 4484 aa3.38□□□□□ -1.87
Scn9a-201ENSMUST00000100063 ApobE9Q414 4505 aa3.36□□□□□ -1.87
Scn9a-201ENSMUST00000100063 Krtap4-6Q3V4B7 195 aa3.36□□□□□ -1.87
Scn9a-201ENSMUST00000100063 Dync1h1Q9JHU4 4644 aaKnown RBP3.36□□□□□ -1.87
Scn9a-201ENSMUST00000100063 Krtap31-2Q8CAY5 177 aa3.33□□□□□ -1.88
Scn9a-201ENSMUST00000100063 Dnah8Q91XQ0 4731 aa3.33□□□□□ -1.88
Scn9a-201ENSMUST00000100063 Hectd4E9Q2E4 4418 aa3.31□□□□□ -1.88
Scn9a-201ENSMUST00000100063 Dnah11E9Q7N9 4488 aa3.29□□□□□ -1.88
Scn9a-201ENSMUST00000100063 Sprr2dO70555 85 aa3.28□□□□□ -1.88
Scn9a-201ENSMUST00000100063 Lrp1bQ9JI18 4599 aa3.25□□□□□ -1.89
Scn9a-201ENSMUST00000100063 Herc2Q4U2R1 4836 aa3.23□□□□□ -1.89
Scn9a-201ENSMUST00000100063 Gm11596B1AQB0 205 aa3.23□□□□□ -1.89
Scn9a-201ENSMUST00000100063 A030003K21RikA0A1Y7VIM3 128 aa3.22□□□□□ -1.89
Scn9a-201ENSMUST00000100063 Krtap4-7Q9D732 168 aa3.21□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Krtap4-1Q3UUY3 169 aa3.19□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Fat3Q8BNA6 4555 aa3.18□□□□□ -1.9
Scn9a-201ENSMUST00000100063 PcloQ9QYX7 5068 aa3.18□□□□□ -1.9
Scn9a-201ENSMUST00000100063 2300003K06RikA2A4M0 262 aa3.17□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Gm11564A2A4L9 201 aa3.15□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Gm11563B1AQ90 168 aa3.15□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Gm11595B1AQA7 289 aa3.15□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Krtap4-8B1AQA8 209 aa3.15□□□□□ -1.9
Scn9a-201ENSMUST00000100063 Gm11562A0PK51 136 aa3.12□□□□□ -1.91
Scn9a-201ENSMUST00000100063 Krtap4-9B1AQA9 244 aa3.12□□□□□ -1.91
Scn9a-201ENSMUST00000100063 Gm11938Q9D3H4 131 aa3.08□□□□□ -1.92
Scn9a-201ENSMUST00000100063 Mt3P28184 68 aa3.07□□□□□ -1.92
Scn9a-201ENSMUST00000100063 Krtap31-1Q9D644 177 aa3.07□□□□□ -1.92
Scn9a-201ENSMUST00000100063 Krtap4-13Q9D7P3 165 aa3.07□□□□□ -1.92
Scn9a-201ENSMUST00000100063 Sprr2bO70554 98 aa3.06□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 1644.7 ms