RNA–Protein interactions for RNA: ENSMUST00000068452.9

Cnot1-201, Transcript of CCR4-NOT transcription complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Cnot1, Length 8,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot1-201ENSMUST00000068452 Dnhd1D3Z2X2 4750 aa2.28□□□□□ -2.04
Cnot1-201ENSMUST00000068452 Dnah10D3YYQ8 4591 aa2.27□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Pkhd1l1Q80ZA4 4249 aa2.27□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Birc6O88738 4882 aa2.27□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Dnah6E9Q0B6 4144 aa2.26□□□□□ -2.05
Cnot1-201ENSMUST00000068452 BsnO88737 3942 aa2.24□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Dnah9B1AR51 4484 aa2.24□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Gm7735D3YX18 52 aa2.24□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Krtap7-1Q9D3I6 87 aa2.23□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Fras1Q80T14 4010 aa2.23□□□□□ -2.05
Cnot1-201ENSMUST00000068452 Gm9789Q8BIG3 52 aa2.21□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Krtap13-1Q8K198 168 aa2.21□□□□□ -2.06
Cnot1-201ENSMUST00000068452 SacsQ9JLC8 4582 aa2.19□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Crct1Q6PAI5 102 aa2.18□□□□□ -2.06
Cnot1-201ENSMUST00000068452 ApobE9Q414 4505 aa2.18□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Krtap1-5A2A590 122 aa2.18□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Herc2Q4U2R1 4836 aa2.17□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Kmt2aP55200 3966 aa2.16□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Ryr3A2AGL3 4863 aa2.16□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Krtap3-2Q9D638 99 aa2.15□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Krtap3-3Q9D7P0 99 aa2.15□□□□□ -2.06
Cnot1-201ENSMUST00000068452 Fat3Q8BNA6 4555 aa2.15□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Gm19402J3QJV4 266 aa2.14□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Kmt2cQ8BRH4 4903 aa2.14□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Mycbp2Q7TPH6 4711 aa2.14□□□□□ -2.07
Cnot1-201ENSMUST00000068452 HydinQ80W93 5154 aa2.14□□□□□ -2.07
Cnot1-201ENSMUST00000068452 LorP18165 486 aa2.14□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Muc6Q80T03 2850 aa2.12□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Fat1A0A1L1SQU7 4645 aa2.12□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Krtap3-1A2A591 98 aa2.11□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Gm6358A0A087WPH4 74 aa2.11□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Dnah7aE9Q0T8 4024 aa2.11□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Krtap8-1O08633 61 aa2.1□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Sprr2kO70562 68 aa2.1□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Dnah7cA0A087WR13 4024 aa2.1□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Gm10318A0A1W2P728 225 aa2.1□□□□□ -2.07
Cnot1-201ENSMUST00000068452 Sprr2gO70558 76 aa2.09□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap19-9aF8WH65 55 aa2.09□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap31-2Q8CAY5 177 aa2.08□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Fat2Q5F226 4351 aa2.08□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap1-4Q3V2D6 188 aa2.07□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Kiaa1109A2AAE1 5005 aa2.06□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Lrp2A2ARV4 4660 aa2.05□□□□□ -2.08
Cnot1-201ENSMUST00000068452 4932415D10RikA0A1W2P6U8 4986 aa2.04□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap19-3Q925H6 87 aa2.03□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap12-1Q9Z287 130 aa2.03□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap19-9bQ99NG9 58 aa2.03□□□□□ -2.08
Cnot1-201ENSMUST00000068452 Krtap1-3A2A588 173 aa2.02□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Krtap16-3Q8C1I6 86 aa2.02□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Krtap19-1Q925H2 87 aa2.01□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Vps13bQ80TY5 3993 aa2.01□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Gm10061D3Z714 54 aa2□□□□□ -2.09
Cnot1-201ENSMUST00000068452 PcloQ9QYX7 5068 aa2□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Gm11562A0PK51 136 aa1.98□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Sprr2a3Q4KL71 83 aa1.98□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Sprr2a1Q9CQK8 83 aa1.98□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Krtap31-1Q9D644 177 aa1.97□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Pkhd1E9PZ36 4059 aa1.97□□□□□ -2.09
Cnot1-201ENSMUST00000068452 Gm11569B1AQB1 180 aa1.96□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Krtap9-5A2A5X3 358 aa1.94□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Krtap4-2B1AQ85 167 aa1.93□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Lrp1Q91ZX7 4545 aaKnown RBP1.93□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Abca13Q5SSE9 5034 aa1.93□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Lce1gQ9D195 139 aa1.91□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Fat4Q2PZL6 4981 aa1.9□□□□□ -2.1
Cnot1-201ENSMUST00000068452 Rnf213E9Q555 5152 aaKnown RBP1.9□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Krtap19-2Q925I0 141 aa1.88□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Lce3bQ9CQM7 98 aa1.87□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Ubr4A2AN08 5180 aa1.87□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Krtap17-1A2A5X6 109 aa1.87□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Lce3cQ91V05 98 aa1.86□□□□□ -2.11
Cnot1-201ENSMUST00000068452 2310046K23RikA0A0A6YVW6 87 aa1.85□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Gm10100J3QK64 120 aa1.84□□□□□ -2.11
Cnot1-201ENSMUST00000068452 Sprr2fO70557 76 aa1.83□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Ush2AQ2QI47 5193 aa1.83□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Gm11596B1AQB0 205 aa1.82□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Lce3dE9Q8V1 98 aa1.82□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Krtap22-2J3QNX6 67 aa1.82□□□□□ -2.12
Cnot1-201ENSMUST00000068452 SspoQ8CG65 4998 aa1.81□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Hmcn2A2AJ76 5100 aa1.81□□□□□ -2.12
Cnot1-201ENSMUST00000068452 ZanO88799 5376 aa1.81□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Krtap9-3Q3V2C1 136 aa1.81□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Muc5bE9Q5I3 4800 aa1.81□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Gm10272F7CZ33 110 aa1.8□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Gm10142J3KMP7 120 aa1.8□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Mt2P02798 61 aa1.8□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Lce3eF8VQJ0 98 aa1.8□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Lce3fQ6PAI4 98 aa1.8□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Sprr2iO70560 76 aa1.78□□□□□ -2.12
Cnot1-201ENSMUST00000068452 Mt3P28184 68 aa1.78□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Krtap4-6Q3V4B7 195 aa1.77□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Syne2Q6ZWQ0 6874 aaKnown RBP1.77□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Lce3aQ497I5 98 aa1.76□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Krtap4-1Q3UUY3 169 aa1.75□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Gm10024A0A0A0MQA4 119 aa1.75□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Gm38119A0A0A6YX29 146 aa1.73□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Lce1jD3YUU5 139 aa1.73□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Gm11564A2A4L9 201 aa1.73□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Gm11563B1AQ90 168 aa1.73□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Gm11595B1AQA7 289 aa1.73□□□□□ -2.13
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms