RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 Lce3cQ91V05 98 aa6.36□□□□□ -1.39
Rai1-201ENSMUST00000064190 Dnah10D3YYQ8 4591 aa6.29□□□□□ -1.4
Rai1-201ENSMUST00000064190 2310046K23RikA0A0A6YVW6 87 aa6.28□□□□□ -1.4
Rai1-201ENSMUST00000064190 Gm10100J3QK64 120 aa6.22□□□□□ -1.41
Rai1-201ENSMUST00000064190 Kmt2aP55200 3966 aa6.22□□□□□ -1.41
Rai1-201ENSMUST00000064190 Gm10272F7CZ33 110 aa6.21□□□□□ -1.42
Rai1-201ENSMUST00000064190 PrkdcP97313 4128 aa6.17□□□□□ -1.42
Rai1-201ENSMUST00000064190 Lce3eF8VQJ0 98 aa6.15□□□□□ -1.43
Rai1-201ENSMUST00000064190 Lce3fQ6PAI4 98 aa6.15□□□□□ -1.43
Rai1-201ENSMUST00000064190 Dnah6E9Q0B6 4144 aa6.14□□□□□ -1.43
Rai1-201ENSMUST00000064190 Lce1mQ9CR91 182 aa6.12□□□□□ -1.43
Rai1-201ENSMUST00000064190 Dnah7bL7N1Y0 4068 aa6.11□□□□□ -1.43
Rai1-201ENSMUST00000064190 Lce1jD3YUU5 139 aa6.09□□□□□ -1.44
Rai1-201ENSMUST00000064190 Lce1gQ9D195 139 aa6.09□□□□□ -1.44
Rai1-201ENSMUST00000064190 Lce1iQ9D6P5 149 aa6.09□□□□□ -1.44
Rai1-201ENSMUST00000064190 Lce1hQ9D6R3 140 aa6.09□□□□□ -1.44
Rai1-201ENSMUST00000064190 Sprr2iO70560 76 aa6.06□□□□□ -1.44
Rai1-201ENSMUST00000064190 Lce3dE9Q8V1 98 aa6.06□□□□□ -1.44
Rai1-201ENSMUST00000064190 Gm38119A0A0A6YX29 146 aa6.05□□□□□ -1.44
Rai1-201ENSMUST00000064190 Gm10142J3KMP7 120 aa6.04□□□□□ -1.44
Rai1-201ENSMUST00000064190 Dnah5Q8VHE6 4621 aa6□□□□□ -1.45
Rai1-201ENSMUST00000064190 Vps13bQ80TY5 3993 aa6□□□□□ -1.45
Rai1-201ENSMUST00000064190 Lce3aQ497I5 98 aa5.95□□□□□ -1.46
Rai1-201ENSMUST00000064190 Sprr2fO70557 76 aa5.95□□□□□ -1.46
Rai1-201ENSMUST00000064190 Dnah2P0C6F1 4456 aa5.93□□□□□ -1.46
Rai1-201ENSMUST00000064190 Vps13dB1ART2 4390 aa5.93□□□□□ -1.46
Rai1-201ENSMUST00000064190 Krtap9-5A2A5X3 358 aa5.92□□□□□ -1.46
Rai1-201ENSMUST00000064190 Krtap19-3Q925H6 87 aa5.89□□□□□ -1.47
Rai1-201ENSMUST00000064190 Dnah11E9Q7N9 4488 aa5.88□□□□□ -1.47
Rai1-201ENSMUST00000064190 Dnah3Q8BW94 4083 aa5.86□□□□□ -1.47
Rai1-201ENSMUST00000064190 TnxbO35452 4006 aa5.85□□□□□ -1.47
Rai1-201ENSMUST00000064190 Dnah17Q69Z23 4481 aa5.82□□□□□ -1.48
Rai1-201ENSMUST00000064190 Gm10024A0A0A0MQA4 119 aa5.81□□□□□ -1.48
Rai1-201ENSMUST00000064190 ApobE9Q414 4505 aa5.78□□□□□ -1.48
Rai1-201ENSMUST00000064190 Sprr2eO70556 76 aa5.78□□□□□ -1.48
Rai1-201ENSMUST00000064190 Dnah1E9Q8T7 4250 aa5.76□□□□□ -1.49
Rai1-201ENSMUST00000064190 Stard9Q80TF6 4561 aa5.73□□□□□ -1.49
Rai1-201ENSMUST00000064190 Dync2h1Q45VK7 4306 aa5.71□□□□□ -1.5
Rai1-201ENSMUST00000064190 PlecQ9QXS1 4691 aaKnown RBP5.7□□□□□ -1.5
Rai1-201ENSMUST00000064190 Lce1bQ9D149 137 aa5.67□□□□□ -1.5
Rai1-201ENSMUST00000064190 Krtap16-3Q8C1I6 86 aa5.66□□□□□ -1.5
Rai1-201ENSMUST00000064190 Mycbp2Q7TPH6 4711 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Lce1fB9EJP6 147 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Lce1cQ9D1C5 147 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Lce1lQ9D1G7 135 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Lce1dQ9D731 133 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Dnah7cA0A087WR13 4024 aa5.64□□□□□ -1.51
Rai1-201ENSMUST00000064190 Dnah7aE9Q0T8 4024 aa5.63□□□□□ -1.51
Rai1-201ENSMUST00000064190 Dnah9B1AR51 4484 aa5.63□□□□□ -1.51
Rai1-201ENSMUST00000064190 Fras1Q80T14 4010 aa5.62□□□□□ -1.51
Rai1-201ENSMUST00000064190 Fat1A0A1L1SQU7 4645 aa5.6□□□□□ -1.51
Rai1-201ENSMUST00000064190 Lce1eQ9D139 143 aa5.59□□□□□ -1.51
Rai1-201ENSMUST00000064190 Krtap22-2J3QNX6 67 aa5.56□□□□□ -1.52
Rai1-201ENSMUST00000064190 Mt2P02798 61 aa5.54□□□□□ -1.52
Rai1-201ENSMUST00000064190 SacsQ9JLC8 4582 aa5.51□□□□□ -1.53
Rai1-201ENSMUST00000064190 Fat3Q8BNA6 4555 aa5.5□□□□□ -1.53
Rai1-201ENSMUST00000064190 Krtap19-2Q925I0 141 aa5.44□□□□□ -1.54
Rai1-201ENSMUST00000064190 Prm1P02319 51 aa5.42□□□□□ -1.54
Rai1-201ENSMUST00000064190 Lrp1bQ9JI18 4599 aa5.42□□□□□ -1.54
Rai1-201ENSMUST00000064190 Lrp1Q91ZX7 4545 aaKnown RBP5.4□□□□□ -1.54
Rai1-201ENSMUST00000064190 Pkd1O08852 4293 aa5.37□□□□□ -1.55
Rai1-201ENSMUST00000064190 Krtap19-1Q925H2 87 aa5.34□□□□□ -1.56
Rai1-201ENSMUST00000064190 Hectd4E9Q2E4 4418 aa5.33□□□□□ -1.56
Rai1-201ENSMUST00000064190 Fat2Q5F226 4351 aa5.33□□□□□ -1.56
Rai1-201ENSMUST00000064190 Pkhd1E9PZ36 4059 aa5.31□□□□□ -1.56
Rai1-201ENSMUST00000064190 Gm7735D3YX18 52 aa5.29□□□□□ -1.56
Rai1-201ENSMUST00000064190 Krtap4-2B1AQ85 167 aa5.28□□□□□ -1.56
Rai1-201ENSMUST00000064190 Gm11569B1AQB1 180 aa5.28□□□□□ -1.56
Rai1-201ENSMUST00000064190 Dync1h1Q9JHU4 4644 aaKnown RBP5.27□□□□□ -1.57
Rai1-201ENSMUST00000064190 Mt4P47945 62 aa5.27□□□□□ -1.57
Rai1-201ENSMUST00000064190 Krtap1-3A2A588 173 aa5.23□□□□□ -1.57
Rai1-201ENSMUST00000064190 Sprr2dO70555 85 aa5.19□□□□□ -1.58
Rai1-201ENSMUST00000064190 Krtap19-4Q925H7 84 aa5.19□□□□□ -1.58
Rai1-201ENSMUST00000064190 Dnah8Q91XQ0 4731 aa5.16□□□□□ -1.58
Rai1-201ENSMUST00000064190 Ryr1E9PZQ0 5035 aa5.14□□□□□ -1.59
Rai1-201ENSMUST00000064190 Krtap9-3Q3V2C1 136 aa5.13□□□□□ -1.59
Rai1-201ENSMUST00000064190 Krtap4-6Q3V4B7 195 aa5.12□□□□□ -1.59
Rai1-201ENSMUST00000064190 Gm9789Q8BIG3 52 aa5.11□□□□□ -1.59
Rai1-201ENSMUST00000064190 Lrp2A2ARV4 4660 aa5.1□□□□□ -1.59
Rai1-201ENSMUST00000064190 Gm10061D3Z714 54 aa5.07□□□□□ -1.6
Rai1-201ENSMUST00000064190 Sprr2hO70559 108 aa5.04□□□□□ -1.6
Rai1-201ENSMUST00000064190 Pkhd1l1Q80ZA4 4249 aa4.94□□□□□ -1.62
Rai1-201ENSMUST00000064190 Krtap31-1Q9D644 177 aa4.89□□□□□ -1.63
Rai1-201ENSMUST00000064190 Krtap4-1Q3UUY3 169 aa4.84□□□□□ -1.63
Rai1-201ENSMUST00000064190 Dnhd1D3Z2X2 4750 aa4.83□□□□□ -1.64
Rai1-201ENSMUST00000064190 Gm11596B1AQB0 205 aa4.82□□□□□ -1.64
Rai1-201ENSMUST00000064190 2300003K06RikA2A4M0 262 aa4.78□□□□□ -1.64
Rai1-201ENSMUST00000064190 Lce1a1Q9CQH5 143 aa4.77□□□□□ -1.65
Rai1-201ENSMUST00000064190 Lce1a2Q9D1K4 149 aa4.77□□□□□ -1.65
Rai1-201ENSMUST00000064190 Ryr3A2AGL3 4863 aa4.76□□□□□ -1.65
Rai1-201ENSMUST00000064190 Krtap31-2Q8CAY5 177 aa4.75□□□□□ -1.65
Rai1-201ENSMUST00000064190 Kmt2cQ8BRH4 4903 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Krtap4-7Q9D732 168 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Gm11564A2A4L9 201 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Gm11563B1AQ90 168 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Gm11595B1AQA7 289 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Krtap4-8B1AQA8 209 aa4.74□□□□□ -1.65
Rai1-201ENSMUST00000064190 Krtap4-9B1AQA9 244 aa4.73□□□□□ -1.65
Rai1-201ENSMUST00000064190 Krtap4-16Q91W93 202 aa4.72□□□□□ -1.65
Rai1-201ENSMUST00000064190 Sprr2bO70554 98 aa4.71□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms