RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 PrkdcP97313 4128 aa3.47□□□□□ -1.85
Cux1-201ENSMUST00000004097 Dnah11E9Q7N9 4488 aa3.46□□□□□ -1.86
Cux1-201ENSMUST00000004097 Fras1Q80T14 4010 aa3.46□□□□□ -1.86
Cux1-201ENSMUST00000004097 Lce3cQ91V05 98 aa3.46□□□□□ -1.86
Cux1-201ENSMUST00000004097 Vps13bQ80TY5 3993 aa3.44□□□□□ -1.86
Cux1-201ENSMUST00000004097 Sprr2iO70560 76 aa3.44□□□□□ -1.86
Cux1-201ENSMUST00000004097 Krtap3-1A2A591 98 aa3.43□□□□□ -1.86
Cux1-201ENSMUST00000004097 Dnah10D3YYQ8 4591 aa3.4□□□□□ -1.87
Cux1-201ENSMUST00000004097 Lce1jD3YUU5 139 aa3.39□□□□□ -1.87
Cux1-201ENSMUST00000004097 Lce1gQ9D195 139 aa3.39□□□□□ -1.87
Cux1-201ENSMUST00000004097 Lce1iQ9D6P5 149 aa3.39□□□□□ -1.87
Cux1-201ENSMUST00000004097 Lce1hQ9D6R3 140 aa3.39□□□□□ -1.87
Cux1-201ENSMUST00000004097 Dnah14A0A140LIJ4 4489 aa3.38□□□□□ -1.87
Cux1-201ENSMUST00000004097 Krtap12-1Q9Z287 130 aa3.36□□□□□ -1.87
Cux1-201ENSMUST00000004097 Krtap19-9bQ99NG9 58 aa3.36□□□□□ -1.87
Cux1-201ENSMUST00000004097 Huwe1Q7TMY8 4377 aaKnown RBP3.34□□□□□ -1.87
Cux1-201ENSMUST00000004097 Krtap1-4Q3V2D6 188 aa3.31□□□□□ -1.88
Cux1-201ENSMUST00000004097 Krtap19-3Q925H6 87 aa3.29□□□□□ -1.88
Cux1-201ENSMUST00000004097 Ryr1E9PZQ0 5035 aa3.28□□□□□ -1.88
Cux1-201ENSMUST00000004097 Gm10272F7CZ33 110 aa3.28□□□□□ -1.88
Cux1-201ENSMUST00000004097 Lce3eF8VQJ0 98 aa3.27□□□□□ -1.89
Cux1-201ENSMUST00000004097 Lce3fQ6PAI4 98 aa3.27□□□□□ -1.89
Cux1-201ENSMUST00000004097 Dnah9B1AR51 4484 aa3.26□□□□□ -1.89
Cux1-201ENSMUST00000004097 Krtap1-5A2A590 122 aa3.25□□□□□ -1.89
Cux1-201ENSMUST00000004097 Lce3dE9Q8V1 98 aa3.24□□□□□ -1.89
Cux1-201ENSMUST00000004097 Dnah5Q8VHE6 4621 aa3.23□□□□□ -1.89
Cux1-201ENSMUST00000004097 PlecQ9QXS1 4691 aaKnown RBP3.23□□□□□ -1.89
Cux1-201ENSMUST00000004097 Sprr2eO70556 76 aa3.2□□□□□ -1.9
Cux1-201ENSMUST00000004097 Krtap9-5A2A5X3 358 aa3.2□□□□□ -1.9
Cux1-201ENSMUST00000004097 Dnah8Q91XQ0 4731 aa3.19□□□□□ -1.9
Cux1-201ENSMUST00000004097 Lce1bQ9D149 137 aa3.19□□□□□ -1.9
Cux1-201ENSMUST00000004097 Gm10100J3QK64 120 aa3.18□□□□□ -1.9
Cux1-201ENSMUST00000004097 Sprr2a3Q4KL71 83 aa3.18□□□□□ -1.9
Cux1-201ENSMUST00000004097 Sprr2a1Q9CQK8 83 aa3.18□□□□□ -1.9
Cux1-201ENSMUST00000004097 Dnah17Q69Z23 4481 aa3.17□□□□□ -1.9
Cux1-201ENSMUST00000004097 Lce3aQ497I5 98 aa3.17□□□□□ -1.9
Cux1-201ENSMUST00000004097 TnxbO35452 4006 aa3.17□□□□□ -1.9
Cux1-201ENSMUST00000004097 Dnah1E9Q8T7 4250 aa3.16□□□□□ -1.9
Cux1-201ENSMUST00000004097 Vps13dB1ART2 4390 aa3.15□□□□□ -1.91
Cux1-201ENSMUST00000004097 Lce1fB9EJP6 147 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Lce1cQ9D1C5 147 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Lce1lQ9D1G7 135 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Lce1dQ9D731 133 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Krtap3-2Q9D638 99 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Krtap3-3Q9D7P0 99 aa3.13□□□□□ -1.91
Cux1-201ENSMUST00000004097 Hectd4E9Q2E4 4418 aa3.12□□□□□ -1.91
Cux1-201ENSMUST00000004097 Dnah2P0C6F1 4456 aa3.11□□□□□ -1.91
Cux1-201ENSMUST00000004097 Krtap16-3Q8C1I6 86 aa3.11□□□□□ -1.91
Cux1-201ENSMUST00000004097 Stard9Q80TF6 4561 aa3.11□□□□□ -1.91
Cux1-201ENSMUST00000004097 Dync1h1Q9JHU4 4644 aaKnown RBP3.1□□□□□ -1.91
Cux1-201ENSMUST00000004097 Pkhd1l1Q80ZA4 4249 aa3.09□□□□□ -1.91
Cux1-201ENSMUST00000004097 Dync2h1Q45VK7 4306 aa3.09□□□□□ -1.92
Cux1-201ENSMUST00000004097 Mt4P47945 62 aa3.08□□□□□ -1.92
Cux1-201ENSMUST00000004097 Krtap4-2B1AQ85 167 aa3.08□□□□□ -1.92
Cux1-201ENSMUST00000004097 Gm10142J3KMP7 120 aa3.06□□□□□ -1.92
Cux1-201ENSMUST00000004097 SacsQ9JLC8 4582 aa3.05□□□□□ -1.92
Cux1-201ENSMUST00000004097 Lce1eQ9D139 143 aa3.05□□□□□ -1.92
Cux1-201ENSMUST00000004097 Gm10024A0A0A0MQA4 119 aa3.04□□□□□ -1.92
Cux1-201ENSMUST00000004097 Lrp1bQ9JI18 4599 aa3□□□□□ -1.93
Cux1-201ENSMUST00000004097 Sprr2hO70559 108 aa2.98□□□□□ -1.93
Cux1-201ENSMUST00000004097 Fat1A0A1L1SQU7 4645 aa2.98□□□□□ -1.93
Cux1-201ENSMUST00000004097 Krtap22-2J3QNX6 67 aa2.97□□□□□ -1.93
Cux1-201ENSMUST00000004097 Gm11569B1AQB1 180 aa2.97□□□□□ -1.93
Cux1-201ENSMUST00000004097 ApobE9Q414 4505 aa2.97□□□□□ -1.93
Cux1-201ENSMUST00000004097 Pkd1O08852 4293 aa2.96□□□□□ -1.94
Cux1-201ENSMUST00000004097 Lrp1Q91ZX7 4545 aaKnown RBP2.96□□□□□ -1.94
Cux1-201ENSMUST00000004097 Mycbp2Q7TPH6 4711 aa2.94□□□□□ -1.94
Cux1-201ENSMUST00000004097 Mt2P02798 61 aa2.94□□□□□ -1.94
Cux1-201ENSMUST00000004097 Prm1P02319 51 aa2.93□□□□□ -1.94
Cux1-201ENSMUST00000004097 Krtap4-6Q3V4B7 195 aa2.93□□□□□ -1.94
Cux1-201ENSMUST00000004097 Fat3Q8BNA6 4555 aa2.93□□□□□ -1.94
Cux1-201ENSMUST00000004097 Fat2Q5F226 4351 aa2.91□□□□□ -1.94
Cux1-201ENSMUST00000004097 Krtap19-4Q925H7 84 aa2.9□□□□□ -1.94
Cux1-201ENSMUST00000004097 Krtap19-2Q925I0 141 aa2.9□□□□□ -1.95
Cux1-201ENSMUST00000004097 Sprr2dO70555 85 aa2.86□□□□□ -1.95
Cux1-201ENSMUST00000004097 Gm7735D3YX18 52 aa2.84□□□□□ -1.96
Cux1-201ENSMUST00000004097 PcloQ9QYX7 5068 aa2.82□□□□□ -1.96
Cux1-201ENSMUST00000004097 Ryr3A2AGL3 4863 aa2.79□□□□□ -1.96
Cux1-201ENSMUST00000004097 Krtap17-1A2A5X6 109 aa2.79□□□□□ -1.96
Cux1-201ENSMUST00000004097 Krtap9-3Q3V2C1 136 aa2.77□□□□□ -1.97
Cux1-201ENSMUST00000004097 Krtap1-3A2A588 173 aa2.76□□□□□ -1.97
Cux1-201ENSMUST00000004097 Sprr2bO70554 98 aa2.76□□□□□ -1.97
Cux1-201ENSMUST00000004097 2300003K06RikA2A4M0 262 aa2.76□□□□□ -1.97
Cux1-201ENSMUST00000004097 Krtap4-7Q9D732 168 aa2.76□□□□□ -1.97
Cux1-201ENSMUST00000004097 Gm10061D3Z714 54 aa2.75□□□□□ -1.97
Cux1-201ENSMUST00000004097 Gm11596B1AQB0 205 aa2.75□□□□□ -1.97
Cux1-201ENSMUST00000004097 Krtap4-1Q3UUY3 169 aa2.73□□□□□ -1.97
Cux1-201ENSMUST00000004097 Dnhd1D3Z2X2 4750 aa2.72□□□□□ -1.97
Cux1-201ENSMUST00000004097 Gm9789Q8BIG3 52 aa2.72□□□□□ -1.97
Cux1-201ENSMUST00000004097 Lce1a1Q9CQH5 143 aa2.72□□□□□ -1.97
Cux1-201ENSMUST00000004097 Lce1a2Q9D1K4 149 aa2.72□□□□□ -1.97
Cux1-201ENSMUST00000004097 Ryr2E9Q401 4966 aaKnown RBP2.69□□□□□ -1.98
Cux1-201ENSMUST00000004097 Krtap4-9B1AQA9 244 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Lrp2A2ARV4 4660 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Gm11564A2A4L9 201 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Gm11563B1AQ90 168 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Gm11595B1AQA7 289 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Krtap4-8B1AQA8 209 aa2.68□□□□□ -1.98
Cux1-201ENSMUST00000004097 Krtap4-13Q9D7P3 165 aa2.67□□□□□ -1.98
Cux1-201ENSMUST00000004097 Krtap19-1Q925H2 87 aa2.64□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms