RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 NUP53Q03790 475 aa3.06□□□□□ -1.92
snR54snR54 CRD1Q07560 283 aa3.06□□□□□ -1.92
snR54snR54 AIM6Q07716 390 aa3.06□□□□□ -1.92
snR54snR54 AAD4Q07747 329 aa3.06□□□□□ -1.92
snR54snR54 YPL191CQ08930 360 aa3.06□□□□□ -1.92
snR54snR54 ICL2Q12031 575 aa3.06□□□□□ -1.92
snR54snR54 RRI1Q12468 440 aa3.06□□□□□ -1.92
snR54snR54 CNA1P23287 553 aa3.05□□□□□ -1.92
snR54snR54 GCS1P35197 352 aa3.05□□□□□ -1.92
snR54snR54 RPF2P36160 344 aaKnown RBP3.05□□□□□ -1.92
snR54snR54 YIL152WP40455 235 aa3.05□□□□□ -1.92
snR54snR54 MAF1P41910 395 aa3.05□□□□□ -1.92
snR54snR54 YJL107CP42947 387 aa3.05□□□□□ -1.92
snR54snR54 ORC5P50874 479 aa3.05□□□□□ -1.92
snR54snR54 ECM22Q05958 814 aaPredicted RBP3.05□□□□□ -1.92
snR54snR54 BUD7Q08754 746 aa3.05□□□□□ -1.92
snR54snR54 ATX2Q12067 313 aa3.05□□□□□ -1.92
snR54snR54 PDE1P22434 369 aa3.04□□□□□ -1.92
snR54snR54 PTC6P25646 442 aa3.04□□□□□ -1.92
snR54snR54 TOM71P38825 639 aaKnown RBP3.04□□□□□ -1.92
snR54snR54 YGR079WP53249 370 aa3.04□□□□□ -1.92
snR54snR54 YPR003CP53394 754 aa3.04□□□□□ -1.92
snR54snR54 YNL144CP53907 740 aa3.04□□□□□ -1.92
snR54snR54 VTC3Q02725 835 aa3.04□□□□□ -1.92
snR54snR54 YMR034CQ05131 434 aaPredicted RBP3.04□□□□□ -1.92
snR54snR54 SRL1Q08673 210 aa3.04□□□□□ -1.92
snR54snR54 DSE3Q08729 430 aa3.04□□□□□ -1.92
snR54snR54 LEA1Q08963 238 aaPredicted RBP3.04□□□□□ -1.92
snR54snR54 COX1P00401 534 aa3.03□□□□□ -1.92
snR54snR54 RPL42AP0CX27 106 aaKnown RBP3.03□□□□□ -1.92
snR54snR54 RPL42BP0CX28 106 aaKnown RBP3.03□□□□□ -1.92
snR54snR54 YCR043CP25361 127 aa3.03□□□□□ -1.92
snR54snR54 MRC1P25588 1096 aa3.03□□□□□ -1.92
snR54snR54 ARN1P38731 627 aa3.03□□□□□ -1.92
snR54snR54 CDC1P40986 491 aa3.03□□□□□ -1.92
snR54snR54 MAD3P47074 515 aa3.03□□□□□ -1.92
snR54snR54 BOP3P53958 396 aa3.03□□□□□ -1.92
snR54snR54 TGL2P54857 326 aa3.03□□□□□ -1.92
snR54snR54 THI3Q07471 609 aa3.03□□□□□ -1.92
snR54snR54 YBR255C-AQ3E776 120 aa3.03□□□□□ -1.92
snR54snR54 LAC1P28496 418 aa3.02□□□□□ -1.93
snR54snR54 MSS51P32335 436 aa3.02□□□□□ -1.93
snR54snR54 FRD1P32614 470 aaKnown RBP3.02□□□□□ -1.93
snR54snR54 RGT1P32862 1170 aa3.02□□□□□ -1.93
snR54snR54 ARC40P38328 384 aaKnown RBP3.02□□□□□ -1.93
snR54snR54 TAM41P53230 385 aa3.02□□□□□ -1.93
snR54snR54 MLH2Q07980 695 aa3.02□□□□□ -1.93
snR54snR54 NEW1Q08972 1196 aaKnown RBP3.02□□□□□ -1.93
snR54snR54 UBX3Q12229 455 aa3.02□□□□□ -1.93
snR54snR54 ARP7Q12406 477 aa3.02□□□□□ -1.93
snR54snR54 SSB1P11484 613 aaKnown RBP3.01□□□□□ -1.93
snR54snR54 STT3P39007 718 aaKnown RBP3.01□□□□□ -1.93
snR54snR54 SSB2P40150 613 aaKnown RBP3.01□□□□□ -1.93
snR54snR54 YGL036WP53185 909 aaPredicted RBP3.01□□□□□ -1.93
snR54snR54 MPD2Q99316 277 aa3.01□□□□□ -1.93
snR54snR54 FUN12P39730 1002 aaKnown RBP3□□□□□ -1.93
snR54snR54 TES1P41903 349 aaKnown RBP3□□□□□ -1.93
snR54snR54 MOT3P54785 490 aaKnown RBP3□□□□□ -1.93
snR54snR54 SND1Q04007 877 aa3□□□□□ -1.93
snR54snR54 PDR8Q06149 701 aa3□□□□□ -1.93
snR54snR54 GSH2Q08220 491 aa3□□□□□ -1.93
snR54snR54 NDD1Q08887 554 aa3□□□□□ -1.93
snR54snR54 YOL114CQ12322 202 aa3□□□□□ -1.93
snR54snR54 RIT1P23796 513 aa2.99□□□□□ -1.93
snR54snR54 SWI4P25302 1093 aaKnown RBP2.99□□□□□ -1.93
snR54snR54 SWC3P31376 625 aa2.99□□□□□ -1.93
snR54snR54 HES1P35843 434 aa2.99□□□□□ -1.93
snR54snR54 OCT1P35999 772 aa2.99□□□□□ -1.93
snR54snR54 VPS41P38959 992 aa2.99□□□□□ -1.93
snR54snR54 YAT2P40017 923 aa2.99□□□□□ -1.93
snR54snR54 CAB2P40506 365 aa2.99□□□□□ -1.93
snR54snR54 UBX6P47049 396 aa2.99□□□□□ -1.93
snR54snR54 DIG1Q03063 452 aaKnown RBP2.99□□□□□ -1.93
snR54snR54 ADE3P07245 946 aaKnown RBP2.98□□□□□ -1.93
snR54snR54 YFL068WP0CX99 160 aa2.98□□□□□ -1.93
snR54snR54 YLL066W-AP0CY00 160 aa2.98□□□□□ -1.93
snR54snR54 YLL067W-AP0CY01 160 aa2.98□□□□□ -1.93
snR54snR54 SIR1P21691 654 aa2.98□□□□□ -1.93
snR54snR54 URK1P27515 501 aa2.98□□□□□ -1.93
snR54snR54 NIC96P34077 839 aa2.98□□□□□ -1.93
snR54snR54 MET30P39014 640 aa2.98□□□□□ -1.93
snR54snR54 TPA1P40032 644 aaKnown RBP2.98□□□□□ -1.93
snR54snR54 YIL169CP40442 995 aa2.98□□□□□ -1.93
snR54snR54 YRB30P53107 440 aaPredicted RBP2.98□□□□□ -1.93
snR54snR54 YDR109CQ04585 715 aa2.98□□□□□ -1.93
snR54snR54 STP3Q05937 343 aa2.98□□□□□ -1.93
snR54snR54 MCH4Q08268 501 aa2.98□□□□□ -1.93
snR54snR54 YLR112WQ12130 139 aa2.98□□□□□ -1.93
snR54snR54 YER145C-AA0A023PYF4 145 aa2.97□□□□□ -1.93
snR54snR54 POL3P15436 1097 aa2.97□□□□□ -1.93
snR54snR54 YCR006CP25350 157 aa2.97□□□□□ -1.93
snR54snR54 VPS25P47142 202 aa2.97□□□□□ -1.93
snR54snR54 EAF7P53911 425 aaKnown RBP2.97□□□□□ -1.93
snR54snR54 YPL108WQ02872 168 aaPredicted RBP2.97□□□□□ -1.93
snR54snR54 IZH1Q03419 316 aa2.97□□□□□ -1.93
snR54snR54 ECM16Q04217 1267 aaKnown RBP2.97□□□□□ -1.93
snR54snR54 PIG1Q06216 648 aa2.97□□□□□ -1.93
snR54snR54 NRT1Q08485 598 aa2.97□□□□□ -1.93
snR54snR54 FRE3Q08905 711 aa2.97□□□□□ -1.93
snR54snR54 SUL2Q12325 893 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms