RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	YJL213W	P40896	331 aa		0.29	□□□□□ -2.36
snR50	snR50	IAH1	P41734	238 aa		0.29	□□□□□ -2.36
snR50	snR50	IES1	P43579	692 aa		0.29	□□□□□ -2.36
snR50	snR50	TIS11	P47977	285 aa		0.29	□□□□□ -2.36
snR50	snR50	COS10	P52924	374 aa		0.29	□□□□□ -2.36
snR50	snR50	RTA1	P53047	317 aa		0.29	□□□□□ -2.36
snR50	snR50	YGR125W	P53273	1036 aa		0.29	□□□□□ -2.36
snR50	snR50	RNH70	P53331	553 aa		0.29	□□□□□ -2.36
snR50	snR50	ATG33	Q06485	197 aa		0.29	□□□□□ -2.36
snR50	snR50	TMC1	Q08422	150 aa	Predicted RBP	0.29	□□□□□ -2.36
snR50	snR50	RPS17A	P02407	136 aa	Known RBP	0.28	□□□□□ -2.36
snR50	snR50	CBP1	P07252	654 aa		0.28	□□□□□ -2.36
snR50	snR50	MRS3	P10566	314 aa		0.28	□□□□□ -2.36
snR50	snR50	RPS17B	P14127	136 aa	Known RBP	0.28	□□□□□ -2.36
snR50	snR50	ISY1	P21374	235 aa	Predicted RBP	0.28	□□□□□ -2.36
snR50	snR50	GSY1	P23337	708 aa		0.28	□□□□□ -2.36
snR50	snR50	PTC6	P25646	442 aa		0.28	□□□□□ -2.36
snR50	snR50	MID2	P36027	376 aa		0.28	□□□□□ -2.36
snR50	snR50	AGP2	P38090	596 aa		0.28	□□□□□ -2.36
snR50	snR50	EHT1	P38295	451 aa		0.28	□□□□□ -2.36
snR50	snR50	YHR020W	P38708	688 aa	Known RBP	0.28	□□□□□ -2.36
snR50	snR50	VAC8	P39968	578 aa		0.28	□□□□□ -2.36
snR50	snR50	YRB30	P53107	440 aa	Predicted RBP	0.28	□□□□□ -2.36
snR50	snR50	MET13	P53128	600 aa		0.28	□□□□□ -2.36
snR50	snR50	TAM41	P53230	385 aa		0.28	□□□□□ -2.36
snR50	snR50	DNM1	P54861	757 aa		0.28	□□□□□ -2.36
snR50	snR50	SMA1	Q02651	245 aa		0.28	□□□□□ -2.36
snR50	snR50	ERP1	Q05359	219 aa	Known RBP	0.28	□□□□□ -2.36
snR50	snR50	THI3	Q07471	609 aa		0.28	□□□□□ -2.36
snR50	snR50	YDL242W	Q07746	117 aa		0.28	□□□□□ -2.36
snR50	snR50	MCH4	Q08268	501 aa		0.28	□□□□□ -2.36
snR50	snR50	LEA1	Q08963	238 aa	Predicted RBP	0.28	□□□□□ -2.36
snR50	snR50	BSC1	Q12140	328 aa		0.28	□□□□□ -2.36
snR50	snR50	RRP12	Q12754	1228 aa	Known RBP	0.28	□□□□□ -2.36
snR50	snR50	HMG1	P12683	1054 aa		0.27	□□□□□ -2.37
snR50	snR50	HMG2	P12684	1045 aa		0.27	□□□□□ -2.37
snR50	snR50	GLN3	P18494	730 aa		0.27	□□□□□ -2.37
snR50	snR50	YKL097C	P34245	136 aa		0.27	□□□□□ -2.37
snR50	snR50	PEA2	P40091	420 aa		0.27	□□□□□ -2.37
snR50	snR50	IDP2	P41939	412 aa		0.27	□□□□□ -2.37
snR50	snR50	BFA1	P47113	574 aa		0.27	□□□□□ -2.37
snR50	snR50	YGL036W	P53185	909 aa	Predicted RBP	0.27	□□□□□ -2.37
snR50	snR50	RPM2	Q02773	1202 aa		0.27	□□□□□ -2.37
snR50	snR50	UBP16	Q02863	499 aa		0.27	□□□□□ -2.37
snR50	snR50	YML119W	Q03208	357 aa		0.27	□□□□□ -2.37
snR50	snR50	UTP21	Q06078	939 aa	Predicted RBP	0.27	□□□□□ -2.37
snR50	snR50	FRE3	Q08905	711 aa		0.27	□□□□□ -2.37
snR50	snR50	FLC1	Q08967	793 aa		0.27	□□□□□ -2.37
snR50	snR50	SSF2	Q12153	453 aa	Predicted RBP	0.27	□□□□□ -2.37
snR50	snR50	YRM1	Q12340	786 aa		0.27	□□□□□ -2.37
snR50	snR50	RPL15A	P05748	204 aa	Known RBP	0.26	□□□□□ -2.37
snR50	snR50	ILV2	P07342	687 aa	Known RBP	0.26	□□□□□ -2.37
snR50	snR50	PRB1	P09232	635 aa		0.26	□□□□□ -2.37
snR50	snR50	SEC12	P11655	471 aa		0.26	□□□□□ -2.37
snR50	snR50	PMR1	P13586	950 aa		0.26	□□□□□ -2.37
snR50	snR50	PRP45	P28004	379 aa	Predicted RBP	0.26	□□□□□ -2.37
snR50	snR50	MF(ALPHA)2	P32435	120 aa		0.26	□□□□□ -2.37
snR50	snR50	MRP21	P38175	177 aa		0.26	□□□□□ -2.37
snR50	snR50	YHR033W	P38690	423 aa		0.26	□□□□□ -2.37
snR50	snR50	YGR210C	P42942	411 aa		0.26	□□□□□ -2.37
snR50	snR50	ASK10	P48361	1146 aa		0.26	□□□□□ -2.37
snR50	snR50	YOL159C	Q08300	171 aa		0.26	□□□□□ -2.37
snR50	snR50	WRS1	Q12109	432 aa	Known RBP	0.26	□□□□□ -2.37
snR50	snR50	GIN4	Q12263	1142 aa		0.26	□□□□□ -2.37
snR50	snR50	YBL111C	Q3E7Y5	667 aa		0.26	□□□□□ -2.37
snR50	snR50	SPT15	P13393	240 aa	Known RBP	0.25	□□□□□ -2.37
snR50	snR50	MCK1	P21965	375 aa	Known RBP	0.25	□□□□□ -2.37
snR50	snR50	PCL2	P25693	308 aa		0.25	□□□□□ -2.37
snR50	snR50	YIM1	P28625	365 aa		0.25	□□□□□ -2.37
snR50	snR50	AGA1	P32323	725 aa		0.25	□□□□□ -2.37
snR50	snR50	YME1	P32795	747 aa		0.25	□□□□□ -2.37
snR50	snR50	PDR3	P33200	976 aa		0.25	□□□□□ -2.37
snR50	snR50	MIC60	P36112	540 aa		0.25	□□□□□ -2.37
snR50	snR50	RPH1	P39956	796 aa		0.25	□□□□□ -2.37
snR50	snR50	PHM8	P40025	321 aa		0.25	□□□□□ -2.37
snR50	snR50	YEN1	P40028	759 aa		0.25	□□□□□ -2.37
snR50	snR50	YJL068C	P40363	299 aa		0.25	□□□□□ -2.37
snR50	snR50	GUF1	P46943	645 aa		0.25	□□□□□ -2.37
snR50	snR50	TIM54	P47045	478 aa		0.25	□□□□□ -2.37
snR50	snR50	PEF1	P53238	335 aa		0.25	□□□□□ -2.37
snR50	snR50	YPR003C	P53394	754 aa		0.25	□□□□□ -2.37
snR50	snR50	HST1	P53685	503 aa		0.25	□□□□□ -2.37
snR50	snR50	YNL234W	P53857	426 aa		0.25	□□□□□ -2.37
snR50	snR50	CTL1	Q03220	320 aa	Known RBP	0.25	□□□□□ -2.37
snR50	snR50	YDR415C	Q04033	374 aa	Predicted RBP	0.25	□□□□□ -2.37
snR50	snR50	YML053C	Q04978	212 aa		0.25	□□□□□ -2.37
snR50	snR50	FPR4	Q06205	392 aa	Predicted RBP	0.25	□□□□□ -2.37
snR50	snR50	JIP5	Q06214	492 aa	Predicted RBP	0.25	□□□□□ -2.37
snR50	snR50	NOP8	Q08287	484 aa	Predicted RBP	0.25	□□□□□ -2.37
snR50	snR50	FAP7	Q12055	197 aa	Predicted RBP	0.25	□□□□□ -2.37
snR50	snR50	YPS3	Q12303	508 aa		0.25	□□□□□ -2.37
snR50	snR50	GID7	P25569	745 aa		0.24	□□□□□ -2.37
snR50	snR50	RPF2	P36160	344 aa	Known RBP	0.24	□□□□□ -2.37
snR50	snR50	RCK2	P38623	610 aa		0.24	□□□□□ -2.37
snR50	snR50	RGI2	P40188	164 aa		0.24	□□□□□ -2.37
snR50	snR50	FET5	P43561	622 aa		0.24	□□□□□ -2.37
snR50	snR50	COS12	P53053	380 aa		0.24	□□□□□ -2.37
snR50	snR50	AIM14	P53109	570 aa		0.24	□□□□□ -2.37
snR50	snR50	EKI1	Q03764	534 aa		0.24	□□□□□ -2.37
snR50	snR50	TSA2	Q04120	196 aa		0.24	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms