RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SCD6YPR129W UBX2Q04228 584 aa3.89□□□□□ -1.79
SCD6YPR129W POB3Q04636 552 aaKnown RBP3.89□□□□□ -1.79
SCD6YPR129W VIP1Q06685 1146 aaKnown RBP3.89□□□□□ -1.79
SCD6YPR129W MDM36Q06820 579 aa3.89□□□□□ -1.79
SCD6YPR129W DNL4Q08387 944 aaPredicted RBP3.89□□□□□ -1.79
SCD6YPR129W VHS3Q08438 674 aa3.89□□□□□ -1.79
SCD6YPR129W YOL098CQ12496 1037 aa3.89□□□□□ -1.79
SCD6YPR129W NOT5Q12514 560 aaPredicted RBP3.89□□□□□ -1.79
SCD6YPR129W CPA2P03965 1118 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W SRD1P09007 221 aa3.88□□□□□ -1.79
SCD6YPR129W ERR1P0CX10 437 aa3.88□□□□□ -1.79
SCD6YPR129W ERR2P0CX11 437 aa3.88□□□□□ -1.79
SCD6YPR129W CDC60P26637 1090 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W VPH1P32563 840 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W PTH2P34222 208 aa3.88□□□□□ -1.79
SCD6YPR129W OSH3P38713 996 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W RTT107P38850 1070 aa3.88□□□□□ -1.79
SCD6YPR129W SPT8P38915 602 aa3.88□□□□□ -1.79
SCD6YPR129W TMN3P40071 706 aa3.88□□□□□ -1.79
SCD6YPR129W FMP10P40098 244 aa3.88□□□□□ -1.79
SCD6YPR129W TRF5P48561 642 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W HOL1P53389 586 aa3.88□□□□□ -1.79
SCD6YPR129W MRS2Q01926 470 aa3.88□□□□□ -1.79
SCD6YPR129W VBA4Q04602 768 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W CRN1Q06440 651 aa3.88□□□□□ -1.79
SCD6YPR129W BRX1Q08235 291 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W RTC5Q12108 567 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W RRI2Q12348 645 aa3.88□□□□□ -1.79
SCD6YPR129W IKI3Q06706 1349 aaKnown RBP3.88□□□□□ -1.79
SCD6YPR129W INH1P01097 85 aa3.87□□□□□ -1.79
SCD6YPR129W AQY1P0CD91 305 aa3.87□□□□□ -1.79
SCD6YPR129W MRPS28P21771 286 aa3.87□□□□□ -1.79
SCD6YPR129W ITR1P30605 584 aa3.87□□□□□ -1.79
SCD6YPR129W PLC1P32383 869 aa3.87□□□□□ -1.79
SCD6YPR129W PXA2P34230 853 aa3.87□□□□□ -1.79
SCD6YPR129W RSM22P36056 628 aa3.87□□□□□ -1.79
SCD6YPR129W TAF5P38129 798 aa3.87□□□□□ -1.79
SCD6YPR129W PSY4P38193 441 aa3.87□□□□□ -1.79
SCD6YPR129W STN1P38960 494 aa3.87□□□□□ -1.79
SCD6YPR129W YJL070CP40361 888 aa3.87□□□□□ -1.79
SCD6YPR129W RET2P43621 546 aa3.87□□□□□ -1.79
SCD6YPR129W YJR142WP47173 342 aa3.87□□□□□ -1.79
SCD6YPR129W ATP22P50273 684 aaPredicted RBP3.87□□□□□ -1.79
SCD6YPR129W YGR021WP53212 290 aa3.87□□□□□ -1.79
SCD6YPR129W HST1P53685 503 aa3.87□□□□□ -1.79
SCD6YPR129W YML108WQ03759 105 aa3.87□□□□□ -1.79
SCD6YPR129W INP2Q03824 705 aa3.87□□□□□ -1.79
SCD6YPR129W SPC19Q03954 165 aa3.87□□□□□ -1.79
SCD6YPR129W KRE28Q04431 385 aa3.87□□□□□ -1.79
SCD6YPR129W CDC53Q12018 815 aaKnown RBP3.87□□□□□ -1.79
SCD6YPR129W DCS2Q12123 353 aa3.87□□□□□ -1.79
SCD6YPR129W SSC1P0CS90 654 aaKnown RBP3.86□□□□□ -1.79
SCD6YPR129W STI1P15705 589 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SCD6YPR129W SUI2P20459 304 aaKnown RBP3.86□□□□□ -1.79
SCD6YPR129W OCA4P25366 362 aa3.86□□□□□ -1.79
SCD6YPR129W NTG1P31378 399 aa3.86□□□□□ -1.79
SCD6YPR129W YEL043WP32618 956 aa3.86□□□□□ -1.79
SCD6YPR129W LHS1P36016 881 aa3.86□□□□□ -1.79
SCD6YPR129W RTS1P38903 757 aa3.86□□□□□ -1.79
SCD6YPR129W DSS1P39112 969 aa3.86□□□□□ -1.79
SCD6YPR129W SNX4P47057 423 aa3.86□□□□□ -1.79
SCD6YPR129W ALG12P53730 551 aa3.86□□□□□ -1.79
SCD6YPR129W ASI1P54074 624 aa3.86□□□□□ -1.79
SCD6YPR129W YMR102CQ03177 834 aa3.86□□□□□ -1.79
SCD6YPR129W ATG16Q03818 150 aa3.86□□□□□ -1.79
SCD6YPR129W RRP17Q04031 235 aaPredicted RBP3.86□□□□□ -1.79
SCD6YPR129W BUD7Q08754 746 aa3.86□□□□□ -1.79
SCD6YPR129W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SCD6YPR129W YRF1-4O13559 1382 aa3.86□□□□□ -1.79
SCD6YPR129W YML133CQ03099 1374 aa3.86□□□□□ -1.79
SCD6YPR129W YLL067CQ07888 1374 aa3.86□□□□□ -1.79
SCD6YPR129W YLL066CQ99208 1374 aa3.86□□□□□ -1.79
SCD6YPR129W YMR084WA2P2R3 262 aa3.85□□□□□ -1.79
SCD6YPR129W RPS3P05750 240 aaKnown RBP3.85□□□□□ -1.79
SCD6YPR129W MSP1P28737 362 aa3.85□□□□□ -1.79
SCD6YPR129W HSP104P31539 908 aaKnown RBP3.85□□□□□ -1.79
SCD6YPR129W TPS2P31688 896 aaKnown RBP3.85□□□□□ -1.79
SCD6YPR129W RME1P32338 300 aaKnown RBP3.85□□□□□ -1.79
SCD6YPR129W KAR9P32526 644 aa3.85□□□□□ -1.79
SCD6YPR129W CSE1P33307 960 aa3.85□□□□□ -1.79
SCD6YPR129W YKL050CP35736 922 aa3.85□□□□□ -1.79
SCD6YPR129W MAF1P41910 395 aa3.85□□□□□ -1.79
SCD6YPR129W YJL043WP47053 257 aa3.85□□□□□ -1.79
SCD6YPR129W COQ6P53318 479 aa3.85□□□□□ -1.79
SCD6YPR129W IPI3P53877 555 aa3.85□□□□□ -1.79
SCD6YPR129W GIM3P53900 129 aa3.85□□□□□ -1.79
SCD6YPR129W IDP3P53982 420 aaKnown RBP3.85□□□□□ -1.79
SCD6YPR129W CEG1Q01159 459 aaPredicted RBP3.85□□□□□ -1.79
SCD6YPR129W NUP53Q03790 475 aa3.85□□□□□ -1.79
SCD6YPR129W ECM5Q03214 1411 aa3.85□□□□□ -1.79
SCD6YPR129W JIP3O13555 125 aa3.84□□□□□ -1.79
SCD6YPR129W GAL1P04385 528 aa3.84□□□□□ -1.79
SCD6YPR129W SUI3P09064 285 aaKnown RBP3.84□□□□□ -1.79
SCD6YPR129W YAP1P19880 650 aaKnown RBP3.84□□□□□ -1.79
SCD6YPR129W PRP22P24384 1145 aaKnown RBP3.84□□□□□ -1.79
SCD6YPR129W IMG2P25642 146 aaPredicted RBP3.84□□□□□ -1.79
SCD6YPR129W BMH1P29311 267 aaKnown RBP3.84□□□□□ -1.79
SCD6YPR129W KRE6P32486 720 aa3.84□□□□□ -1.79
SCD6YPR129W GCS1P35197 352 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms