RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YPL191CQ08930 360 aa3.45□□□□□ -1.86
RPC40YPR110C PCL8Q08966 492 aa3.45□□□□□ -1.86
RPC40YPR110C PRS5Q12265 496 aaKnown RBP3.45□□□□□ -1.86
RPC40YPR110C PNO1Q99216 274 aaKnown RBP3.45□□□□□ -1.86
RPC40YPR110C ATP2P00830 511 aaKnown RBP3.44□□□□□ -1.86
RPC40YPR110C FUM1P08417 488 aaKnown RBP3.44□□□□□ -1.86
RPC40YPR110C TY2A-LR1P0C2J4 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-FP0CX61 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-GR2P0CX62 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-CP25383 438 aa3.44□□□□□ -1.86
RPC40YPR110C LRE1P25579 583 aaKnown RBP3.44□□□□□ -1.86
RPC40YPR110C YJU2P28320 278 aaPredicted RBP3.44□□□□□ -1.86
RPC40YPR110C GDA1P32621 518 aa3.44□□□□□ -1.86
RPC40YPR110C RPF2P36160 344 aaKnown RBP3.44□□□□□ -1.86
RPC40YPR110C ERC1P38767 581 aa3.44□□□□□ -1.86
RPC40YPR110C IST3P40565 148 aaPredicted RBP3.44□□□□□ -1.86
RPC40YPR110C ZAP1P47043 880 aa3.44□□□□□ -1.86
RPC40YPR110C ASE1P50275 885 aa3.44□□□□□ -1.86
RPC40YPR110C COG1P53079 417 aa3.44□□□□□ -1.86
RPC40YPR110C COG2P53271 262 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-DR2Q03483 438 aa3.44□□□□□ -1.86
RPC40YPR110C YMR018WQ04364 514 aa3.44□□□□□ -1.86
RPC40YPR110C RCO1Q04779 684 aa3.44□□□□□ -1.86
RPC40YPR110C HRD3Q05787 833 aa3.44□□□□□ -1.86
RPC40YPR110C ULA1Q12059 462 aa3.44□□□□□ -1.86
RPC40YPR110C SWT1Q12104 458 aa3.44□□□□□ -1.86
RPC40YPR110C BAG7Q12128 409 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-BQ12260 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-OR2Q12293 438 aa3.44□□□□□ -1.86
RPC40YPR110C RRI2Q12348 645 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-DR1Q12392 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-OR1Q12439 438 aa3.44□□□□□ -1.86
RPC40YPR110C TY2A-DR3Q99303 438 aa3.44□□□□□ -1.86
RPC40YPR110C ADE5,7P07244 802 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C RRP43P25359 394 aaPredicted RBP3.43□□□□□ -1.86
RPC40YPR110C GFD2P25370 566 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C ILV6P25605 309 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C CHS3P29465 1165 aa3.43□□□□□ -1.86
RPC40YPR110C YMC1P32331 307 aa3.43□□□□□ -1.86
RPC40YPR110C IMP2'P32351 346 aa3.43□□□□□ -1.86
RPC40YPR110C VBA2P38358 474 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C MTG2P38860 518 aa3.43□□□□□ -1.86
RPC40YPR110C EXO1P39875 702 aa3.43□□□□□ -1.86
RPC40YPR110C PHM8P40025 321 aa3.43□□□□□ -1.86
RPC40YPR110C RIC1P40395 1056 aa3.43□□□□□ -1.86
RPC40YPR110C YIL161WP40449 235 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C DPH1P40487 425 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C MNT3P40549 630 aa3.43□□□□□ -1.86
RPC40YPR110C DJP1P40564 432 aa3.43□□□□□ -1.86
RPC40YPR110C MSY1P48527 492 aa3.43□□□□□ -1.86
RPC40YPR110C VPS4P52917 437 aa3.43□□□□□ -1.86
RPC40YPR110C YGR079WP53249 370 aa3.43□□□□□ -1.86
RPC40YPR110C CBK1P53894 756 aa3.43□□□□□ -1.86
RPC40YPR110C SNO4Q04902 237 aa3.43□□□□□ -1.86
RPC40YPR110C HSP33Q08914 237 aaKnown RBP3.43□□□□□ -1.86
RPC40YPR110C HSP32Q08992 237 aa3.43□□□□□ -1.86
RPC40YPR110C YDR056CQ12025 205 aa3.43□□□□□ -1.86
RPC40YPR110C RPB2P08518 1224 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C HSC82P15108 705 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C RPA135P22138 1203 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C AAD3P25612 363 aa3.42□□□□□ -1.86
RPC40YPR110C RPC34P32910 317 aa3.42□□□□□ -1.86
RPC40YPR110C CNS1P33313 385 aa3.42□□□□□ -1.86
RPC40YPR110C KES1P35844 434 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C SAP1P39955 897 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C CIR1P42940 261 aa3.42□□□□□ -1.86
RPC40YPR110C NPA3P47122 385 aa3.42□□□□□ -1.86
RPC40YPR110C YRB30P53107 440 aaPredicted RBP3.42□□□□□ -1.86
RPC40YPR110C YNL058CP53947 316 aa3.42□□□□□ -1.86
RPC40YPR110C YKU80Q04437 629 aa3.42□□□□□ -1.86
RPC40YPR110C TMA16Q08687 178 aa3.42□□□□□ -1.86
RPC40YPR110C AHA1Q12449 350 aaKnown RBP3.42□□□□□ -1.86
RPC40YPR110C VCX1Q99385 411 aa3.42□□□□□ -1.86
RPC40YPR110C COX1P00401 534 aa3.41□□□□□ -1.86
RPC40YPR110C SES1P07284 462 aaKnown RBP3.41□□□□□ -1.86
RPC40YPR110C SPO11P23179 398 aa3.41□□□□□ -1.86
RPC40YPR110C ADY2P25613 283 aa3.41□□□□□ -1.86
RPC40YPR110C GSY2P27472 705 aa3.41□□□□□ -1.86
RPC40YPR110C MRP20P32387 263 aa3.41□□□□□ -1.86
RPC40YPR110C SIP1P32578 815 aa3.41□□□□□ -1.86
RPC40YPR110C SRB5P32585 307 aa3.41□□□□□ -1.86
RPC40YPR110C PSD1P39006 500 aa3.41□□□□□ -1.86
RPC40YPR110C NOP16P40007 231 aaKnown RBP3.41□□□□□ -1.86
RPC40YPR110C UBP7P40453 1071 aa3.41□□□□□ -1.86
RPC40YPR110C SIP4P46954 829 aa3.41□□□□□ -1.86
RPC40YPR110C PLM2Q04383 521 aa3.41□□□□□ -1.86
RPC40YPR110C YML053CQ04978 212 aa3.41□□□□□ -1.86
RPC40YPR110C STP3Q05937 343 aa3.41□□□□□ -1.86
RPC40YPR110C NUS1Q12063 375 aa3.41□□□□□ -1.86
RPC40YPR110C NBP2Q12163 236 aa3.41□□□□□ -1.86
RPC40YPR110C ERG27Q12452 347 aaKnown RBP3.41□□□□□ -1.86
RPC40YPR110C AI5_ALPHAQ9ZZX1 630 aa3.41□□□□□ -1.86
RPC40YPR110C YLR302CO13544 120 aa3.4□□□□□ -1.87
RPC40YPR110C SEM1O94742 89 aa3.4□□□□□ -1.87
RPC40YPR110C HEM1P09950 548 aaPredicted RBP3.4□□□□□ -1.87
RPC40YPR110C AQY1P0CD91 305 aa3.4□□□□□ -1.87
RPC40YPR110C ERG8P24521 451 aa3.4□□□□□ -1.87
RPC40YPR110C YSP3P25036 478 aa3.4□□□□□ -1.87
RPC40YPR110C RFA2P26754 273 aaKnown RBP3.4□□□□□ -1.87
RPC40YPR110C LAC1P28496 418 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms