RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RPS1AP33442 255 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W YKR051WP36142 418 aa2.25□□□□□ -2.05
SEC16YPL085W HIS2P38635 335 aa2.25□□□□□ -2.05
SEC16YPL085W GND1P38720 489 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W UTP7P40055 554 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W BST1P43571 1029 aa2.25□□□□□ -2.05
SEC16YPL085W AAD10P47182 288 aa2.25□□□□□ -2.05
SEC16YPL085W GIP3Q03016 1276 aa2.25□□□□□ -2.05
SEC16YPL085W JIP4Q03361 876 aa2.25□□□□□ -2.05
SEC16YPL085W RSM28Q03430 361 aa2.25□□□□□ -2.05
SEC16YPL085W VHS1Q03785 461 aa2.25□□□□□ -2.05
SEC16YPL085W ARG7Q04728 441 aa2.25□□□□□ -2.05
SEC16YPL085W YSH1Q06224 779 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W RKM1Q08961 583 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W PTC5Q12511 572 aa2.25□□□□□ -2.05
SEC16YPL085W MDM12Q92328 271 aa2.25□□□□□ -2.05
SEC16YPL085W MRP13P12686 339 aa2.25□□□□□ -2.05
SEC16YPL085W PHO3P24031 467 aa2.25□□□□□ -2.05
SEC16YPL085W SCD5P34758 872 aa2.25□□□□□ -2.05
SEC16YPL085W MIP6P38760 659 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W MNN9P39107 395 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W PHM8P40025 321 aa2.25□□□□□ -2.05
SEC16YPL085W SCC4P40090 624 aa2.25□□□□□ -2.05
SEC16YPL085W BTT1P40314 149 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W YIL089WP40500 205 aa2.25□□□□□ -2.05
SEC16YPL085W GCD10P41814 478 aa2.25□□□□□ -2.05
SEC16YPL085W SNX4P47057 423 aa2.25□□□□□ -2.05
SEC16YPL085W YJL007CP47080 104 aa2.25□□□□□ -2.05
SEC16YPL085W RTT102P53330 157 aa2.25□□□□□ -2.05
SEC16YPL085W IDP3P53982 420 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W PET191Q02772 108 aa2.25□□□□□ -2.05
SEC16YPL085W IRC4Q03036 179 aa2.25□□□□□ -2.05
SEC16YPL085W THI21Q08975 551 aa2.25□□□□□ -2.05
SEC16YPL085W YGL041W-AP0C5N3 154 aa2.25□□□□□ -2.05
SEC16YPL085W SLY1P22213 666 aa2.25□□□□□ -2.05
SEC16YPL085W CRM1P30822 1084 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W YKR073CP36153 106 aa2.25□□□□□ -2.05
SEC16YPL085W CHA4P43634 648 aa2.25□□□□□ -2.05
SEC16YPL085W MPS3P47069 682 aa2.25□□□□□ -2.05
SEC16YPL085W KEL2P50090 882 aa2.25□□□□□ -2.05
SEC16YPL085W FMS1P50264 508 aa2.25□□□□□ -2.05
SEC16YPL085W UGO1Q03327 502 aa2.25□□□□□ -2.05
SEC16YPL085W RRP17Q04031 235 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W RRP15Q06511 250 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W ENO2P00925 437 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W URA3P03962 267 aa2.25□□□□□ -2.05
SEC16YPL085W VPS1P21576 704 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W RSA4P25382 515 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W DSS4P32601 143 aa2.25□□□□□ -2.05
SEC16YPL085W TMT1P32643 299 aa2.25□□□□□ -2.05
SEC16YPL085W MOT2P34909 587 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W RPF2P36160 344 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W YGR273CP53329 174 aa2.25□□□□□ -2.05
SEC16YPL085W YNR014WP53719 212 aa2.25□□□□□ -2.05
SEC16YPL085W YNL146WP53906 100 aa2.25□□□□□ -2.05
SEC16YPL085W CWC21Q03375 135 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W TDA1Q03533 586 aa2.25□□□□□ -2.05
SEC16YPL085W ADY4Q05955 493 aa2.25□□□□□ -2.05
SEC16YPL085W MRI1Q06489 411 aaKnown RBP2.25□□□□□ -2.05
SEC16YPL085W YOR389WQ08912 624 aa2.25□□□□□ -2.05
SEC16YPL085W VIK1Q12045 647 aa2.25□□□□□ -2.05
SEC16YPL085W RMP1Q12530 201 aa2.25□□□□□ -2.05
SEC16YPL085W ISN1Q99312 450 aa2.25□□□□□ -2.05
SEC16YPL085W RAD1P06777 1100 aa2.25□□□□□ -2.05
SEC16YPL085W GAC1P28006 793 aa2.25□□□□□ -2.05
SEC16YPL085W SLI15P38283 698 aa2.25□□□□□ -2.05
SEC16YPL085W APM2P38700 605 aa2.25□□□□□ -2.05
SEC16YPL085W SHY1P53266 389 aa2.25□□□□□ -2.05
SEC16YPL085W SIW14P53965 281 aa2.25□□□□□ -2.05
SEC16YPL085W SNP1Q00916 300 aaPredicted RBP2.25□□□□□ -2.05
SEC16YPL085W SWP1Q02795 286 aa2.25□□□□□ -2.05
SEC16YPL085W SPC2Q04969 178 aa2.25□□□□□ -2.05
SEC16YPL085W PPM2Q08282 695 aa2.25□□□□□ -2.05
SEC16YPL085W IES4Q08561 116 aa2.25□□□□□ -2.05
SEC16YPL085W RAD27P26793 382 aa2.24□□□□□ -2.05
SEC16YPL085W PEX6P33760 1030 aa2.24□□□□□ -2.05
SEC16YPL085W MRP21P38175 177 aa2.24□□□□□ -2.05
SEC16YPL085W AMN1P38285 549 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W MNN1P39106 762 aa2.24□□□□□ -2.05
SEC16YPL085W HSH155P49955 971 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W TMA20P89886 181 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W YMR114CQ04471 368 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W PIB1Q06651 286 aa2.24□□□□□ -2.05
SEC16YPL085W CRD1Q07560 283 aa2.24□□□□□ -2.05
SEC16YPL085W NRT1Q08485 598 aa2.24□□□□□ -2.05
SEC16YPL085W TRE1Q08919 783 aa2.24□□□□□ -2.05
SEC16YPL085W SPE4Q12455 300 aa2.24□□□□□ -2.05
SEC16YPL085W ARP6Q12509 438 aa2.24□□□□□ -2.05
SEC16YPL085W LAG2Q92325 660 aa2.24□□□□□ -2.05
SEC16YPL085W SAS5Q99314 248 aa2.24□□□□□ -2.05
SEC16YPL085W PDC1P06169 563 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W COS2P0CX12 379 aa2.24□□□□□ -2.05
SEC16YPL085W COS3P0CX13 379 aa2.24□□□□□ -2.05
SEC16YPL085W APA1P16550 321 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W PYC2P32327 1180 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W IMP3P32899 183 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W TGL4P36165 910 aa2.24□□□□□ -2.05
SEC16YPL085W RDH54P38086 958 aa2.24□□□□□ -2.05
SEC16YPL085W RSP5P39940 809 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W EDC3P39998 551 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms