RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SVL3Q03088 825 aaKnown RBP3.93□□□□□ -1.78
RPA43YOR340C UBX2Q04228 584 aa3.93□□□□□ -1.78
RPA43YOR340C INM2Q05533 292 aa3.93□□□□□ -1.78
RPA43YOR340C YFT2Q06676 274 aa3.93□□□□□ -1.78
RPA43YOR340C PSR2Q07949 397 aa3.93□□□□□ -1.78
RPA43YOR340C MRH1Q12117 320 aaPredicted RBP3.93□□□□□ -1.78
RPA43YOR340C NKP1Q12493 238 aa3.93□□□□□ -1.78
RPA43YOR340C CBP1P07252 654 aa3.92□□□□□ -1.78
RPA43YOR340C VAS1P07806 1104 aaKnown RBP3.92□□□□□ -1.78
RPA43YOR340C HMG2P12684 1045 aa3.92□□□□□ -1.78
RPA43YOR340C CBP3P21560 335 aa3.92□□□□□ -1.78
RPA43YOR340C MSH1P25846 959 aa3.92□□□□□ -1.78
RPA43YOR340C PRE4P30657 266 aa3.92□□□□□ -1.78
RPA43YOR340C PTK1P36002 662 aaPredicted RBP3.92□□□□□ -1.78
RPA43YOR340C NAB3P38996 802 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RPA43YOR340C YJL206CP39529 758 aa3.92□□□□□ -1.78
RPA43YOR340C SWD1P39706 426 aa3.92□□□□□ -1.78
RPA43YOR340C SPC72P39723 622 aa3.92□□□□□ -1.78
RPA43YOR340C RPT2P40327 437 aaKnown RBP3.92□□□□□ -1.78
RPA43YOR340C MAD2P40958 196 aa3.92□□□□□ -1.78
RPA43YOR340C MAD3P47074 515 aa3.92□□□□□ -1.78
RPA43YOR340C PIB2P53191 635 aa3.92□□□□□ -1.78
RPA43YOR340C PEF1P53238 335 aa3.92□□□□□ -1.78
RPA43YOR340C YNR071CP53757 342 aa3.92□□□□□ -1.78
RPA43YOR340C CRF1Q04930 467 aa3.92□□□□□ -1.78
RPA43YOR340C IRC10Q08118 586 aa3.92□□□□□ -1.78
RPA43YOR340C DBP10Q12389 995 aaKnown RBP3.92□□□□□ -1.78
RPA43YOR340C SUP35P05453 685 aaKnown RBP3.91□□□□□ -1.78
RPA43YOR340C TUP1P16649 713 aa3.91□□□□□ -1.78
RPA43YOR340C DMC1P25453 334 aa3.91□□□□□ -1.78
RPA43YOR340C SET3P36124 751 aa3.91□□□□□ -1.78
RPA43YOR340C GLG1P36143 616 aa3.91□□□□□ -1.78
RPA43YOR340C CTP1P38152 299 aa3.91□□□□□ -1.78
RPA43YOR340C BDH2P39713 417 aa3.91□□□□□ -1.78
RPA43YOR340C YGR151CP53287 111 aa3.91□□□□□ -1.78
RPA43YOR340C YML131WQ03102 365 aa3.91□□□□□ -1.78
RPA43YOR340C YSH1Q06224 779 aaPredicted RBP3.91□□□□□ -1.78
RPA43YOR340C YDL086WQ07505 273 aa3.91□□□□□ -1.78
RPA43YOR340C DIN7Q12086 430 aa3.91□□□□□ -1.78
RPA43YOR340C URA3P03962 267 aa3.9□□□□□ -1.79
RPA43YOR340C ARG1P22768 420 aa3.9□□□□□ -1.79
RPA43YOR340C CWH43P25618 953 aa3.9□□□□□ -1.79
RPA43YOR340C FUB1P25659 250 aa3.9□□□□□ -1.79
RPA43YOR340C RMA1P36001 430 aaKnown RBP3.9□□□□□ -1.79
RPA43YOR340C KEL1P38853 1164 aaKnown RBP3.9□□□□□ -1.79
RPA43YOR340C KHA1P40309 873 aa3.9□□□□□ -1.79
RPA43YOR340C YGL242CP53066 181 aa3.9□□□□□ -1.79
RPA43YOR340C GTR1Q00582 310 aa3.9□□□□□ -1.79
RPA43YOR340C CIA1Q05583 330 aa3.9□□□□□ -1.79
RPA43YOR340C BLS1Q06071 122 aa3.9□□□□□ -1.79
RPA43YOR340C YCG1Q06680 1035 aa3.9□□□□□ -1.79
RPA43YOR340C RRI2Q12348 645 aa3.9□□□□□ -1.79
RPA43YOR340C GFA1P14742 717 aaKnown RBP3.89□□□□□ -1.79
RPA43YOR340C SSH4P32343 579 aa3.89□□□□□ -1.79
RPA43YOR340C APL3P38065 1025 aa3.89□□□□□ -1.79
RPA43YOR340C CDS1P38221 457 aa3.89□□□□□ -1.79
RPA43YOR340C KSP1P38691 1029 aaKnown RBP3.89□□□□□ -1.79
RPA43YOR340C YLF2P38746 405 aa3.89□□□□□ -1.79
RPA43YOR340C YHR097CP38809 366 aaKnown RBP3.89□□□□□ -1.79
RPA43YOR340C CRG1P38892 291 aaRIP-Chip data3.89□□□□□ -1.79not detected
RPA43YOR340C FTR1P40088 404 aa3.89□□□□□ -1.79
RPA43YOR340C VID27P40157 782 aa3.89□□□□□ -1.79
RPA43YOR340C CCT7P42943 550 aaKnown RBP3.89□□□□□ -1.79
RPA43YOR340C YDL183CP48569 320 aa3.89□□□□□ -1.79
RPA43YOR340C FDC1Q03034 503 aa3.89□□□□□ -1.79
RPA43YOR340C EIS1Q05050 843 aaKnown RBP3.89□□□□□ -1.79
RPA43YOR340C AIM41Q12032 185 aa3.89□□□□□ -1.79
RPA43YOR340C HOS1Q12214 470 aa3.89□□□□□ -1.79
RPA43YOR340C CSR2Q12734 1121 aa3.89□□□□□ -1.79
RPA43YOR340C PHO5P00635 467 aa3.88□□□□□ -1.79
RPA43YOR340C MSS1P32559 526 aaPredicted RBP3.88□□□□□ -1.79
RPA43YOR340C GMH1P36125 273 aa3.88□□□□□ -1.79
RPA43YOR340C EHT1P38295 451 aa3.88□□□□□ -1.79
RPA43YOR340C TDP1P38319 544 aa3.88□□□□□ -1.79
RPA43YOR340C STT3P39007 718 aaKnown RBP3.88□□□□□ -1.79
RPA43YOR340C TMN3P40071 706 aa3.88□□□□□ -1.79
RPA43YOR340C YMR147WP40218 223 aaKnown RBP3.88□□□□□ -1.79
RPA43YOR340C QRI1P43123 477 aaKnown RBP3.88□□□□□ -1.79
RPA43YOR340C IML2P47031 731 aa3.88□□□□□ -1.79
RPA43YOR340C TAH11P47112 604 aa3.88□□□□□ -1.79
RPA43YOR340C NMA2P53204 395 aa3.88□□□□□ -1.79
RPA43YOR340C MDR1P53258 950 aa3.88□□□□□ -1.79
RPA43YOR340C CPR6P53691 371 aaKnown RBP3.88□□□□□ -1.79
RPA43YOR340C TRS130Q03660 1102 aa3.88□□□□□ -1.79
RPA43YOR340C TRI1Q05024 226 aa3.88□□□□□ -1.79
RPA43YOR340C TAF3Q12297 353 aa3.88□□□□□ -1.79
RPA43YOR340C PFK2P16862 959 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
RPA43YOR340C BEM3P32873 1128 aa3.87□□□□□ -1.79
RPA43YOR340C ELF1P36053 145 aa3.87□□□□□ -1.79
RPA43YOR340C MLC1P53141 149 aa3.87□□□□□ -1.79
RPA43YOR340C VPS73P53142 486 aaKnown RBP3.87□□□□□ -1.79
RPA43YOR340C DIP5P53388 608 aa3.87□□□□□ -1.79
RPA43YOR340C SPC98P53540 846 aa3.87□□□□□ -1.79
RPA43YOR340C ARC35P53731 342 aaKnown RBP3.87□□□□□ -1.79
RPA43YOR340C UFO1Q04511 668 aa3.87□□□□□ -1.79
RPA43YOR340C TMA64Q04600 565 aaKnown RBP3.87□□□□□ -1.79
RPA43YOR340C IZH3Q07959 543 aa3.87□□□□□ -1.79
RPA43YOR340C RKI1Q12189 258 aa3.87□□□□□ -1.79
RPA43YOR340C NCB2Q92317 146 aa3.87□□□□□ -1.79
RPA43YOR340C LAM4P38800 1345 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms