RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W PEF1P53238 335 aa3.3□□□□□ -1.88
MSH2YOL090W YAP6Q03935 383 aa3.3□□□□□ -1.88
MSH2YOL090W YPR196WQ06595 470 aa3.3□□□□□ -1.88
MSH2YOL090W APL4Q12028 832 aa3.3□□□□□ -1.88
MSH2YOL090W CET1O13297 549 aaPredicted RBP3.3□□□□□ -1.88
MSH2YOL090W SOD2P00447 233 aa3.3□□□□□ -1.88
MSH2YOL090W DAP2P18962 818 aa3.3□□□□□ -1.88
MSH2YOL090W OCA4P25366 362 aa3.3□□□□□ -1.88
MSH2YOL090W ERV1P27882 189 aa3.3□□□□□ -1.88
MSH2YOL090W SUR1P33300 382 aa3.3□□□□□ -1.88
MSH2YOL090W BUD8P41698 603 aa3.3□□□□□ -1.88
MSH2YOL090W CCT7P42943 550 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W BUD27P43573 796 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
MSH2YOL090W SHE4P51534 789 aa3.3□□□□□ -1.88
MSH2YOL090W YMR210WQ03649 449 aa3.3□□□□□ -1.88
MSH2YOL090W SSL1Q04673 461 aaPredicted RBP3.3□□□□□ -1.88
MSH2YOL090W GAD1Q04792 585 aa3.3□□□□□ -1.88
MSH2YOL090W DON1Q05610 365 aa3.3□□□□□ -1.88
MSH2YOL090W ARV1Q06541 321 aa3.3□□□□□ -1.88
MSH2YOL090W AVO1Q08236 1176 aa3.3□□□□□ -1.88
MSH2YOL090W PHM7Q12252 991 aa3.3□□□□□ -1.88
MSH2YOL090W SUL2Q12325 893 aa3.3□□□□□ -1.88
MSH2YOL090W PDR5P33302 1511 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W TY2A-LR1P0C2J4 438 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-FP0CX61 438 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-GR2P0CX62 438 aa3.3□□□□□ -1.88
MSH2YOL090W RFA1P22336 621 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W TY2A-CP25383 438 aa3.3□□□□□ -1.88
MSH2YOL090W SPB1P25582 841 aaPredicted RBP3.3□□□□□ -1.88
MSH2YOL090W RSC6P25632 483 aa3.3□□□□□ -1.88
MSH2YOL090W NIP100P33420 868 aa3.3□□□□□ -1.88
MSH2YOL090W MUP3P38734 546 aa3.3□□□□□ -1.88
MSH2YOL090W MEF2P39677 819 aa3.3□□□□□ -1.88
MSH2YOL090W LYS4P49367 693 aaPredicted RBP3.3□□□□□ -1.88
MSH2YOL090W RPN14P53196 417 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-DR2Q03483 438 aa3.3□□□□□ -1.88
MSH2YOL090W GAS5Q08193 484 aa3.3□□□□□ -1.88
MSH2YOL090W GPB1Q08886 897 aa3.3□□□□□ -1.88
MSH2YOL090W YPL277CQ08989 487 aa3.3□□□□□ -1.88
MSH2YOL090W RPN5Q12250 445 aaKnown RBP3.3□□□□□ -1.88
MSH2YOL090W TY2A-BQ12260 438 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-OR2Q12293 438 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-DR1Q12392 438 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-OR1Q12439 438 aa3.3□□□□□ -1.88
MSH2YOL090W SPE4Q12455 300 aa3.3□□□□□ -1.88
MSH2YOL090W TY2A-DR3Q99303 438 aa3.3□□□□□ -1.88
MSH2YOL090W HNM1P19807 563 aa3.29□□□□□ -1.88
MSH2YOL090W CWH43P25618 953 aa3.29□□□□□ -1.88
MSH2YOL090W YPT7P32939 208 aa3.29□□□□□ -1.88
MSH2YOL090W MIC60P36112 540 aa3.29□□□□□ -1.88
MSH2YOL090W POA1P38218 177 aa3.29□□□□□ -1.88
MSH2YOL090W FSH1P38777 243 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W MET28P40573 187 aa3.29□□□□□ -1.88
MSH2YOL090W YFL066CP43538 392 aa3.29□□□□□ -1.88
MSH2YOL090W ROK1P45818 564 aaPredicted RBP3.29□□□□□ -1.88
MSH2YOL090W YDL183CP48569 320 aa3.29□□□□□ -1.88
MSH2YOL090W CUL3P53202 744 aa3.29□□□□□ -1.88
MSH2YOL090W CSL4P53859 292 aaPredicted RBP3.29□□□□□ -1.88
MSH2YOL090W GPD1Q00055 391 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W NGL2Q03264 515 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W RBA50Q04418 439 aa3.29□□□□□ -1.88
MSH2YOL090W CRD1Q07560 283 aa3.29□□□□□ -1.88
MSH2YOL090W MDY2Q12285 212 aa3.29□□□□□ -1.88
MSH2YOL090W YRF1-4O13559 1382 aa3.29□□□□□ -1.88
MSH2YOL090W MDH1P17505 334 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
MSH2YOL090W PRP28P23394 588 aa3.29□□□□□ -1.88
MSH2YOL090W PEP3P27801 918 aa3.29□□□□□ -1.88
MSH2YOL090W YSC84P32793 468 aa3.29□□□□□ -1.88
MSH2YOL090W YKR075CP36155 307 aa3.29□□□□□ -1.88
MSH2YOL090W GEX2P36173 615 aa3.29□□□□□ -1.88
MSH2YOL090W MRPL36P36531 177 aa3.29□□□□□ -1.88
MSH2YOL090W APE3P37302 537 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W ECM21P38167 1117 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W CDS1P38221 457 aa3.29□□□□□ -1.88
MSH2YOL090W RGI2P40188 164 aa3.29□□□□□ -1.88
MSH2YOL090W SGN1P40561 250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
MSH2YOL090W JJJ3P47138 172 aa3.29□□□□□ -1.88
MSH2YOL090W INN1P53901 409 aa3.29□□□□□ -1.88
MSH2YOL090W EOS1P53938 366 aa3.29□□□□□ -1.88
MSH2YOL090W REG1Q00816 1014 aa3.29□□□□□ -1.88
MSH2YOL090W TOF2Q02208 771 aa3.29□□□□□ -1.88
MSH2YOL090W RPC11Q04307 110 aaPredicted RBP3.29□□□□□ -1.88
MSH2YOL090W RCO1Q04779 684 aa3.29□□□□□ -1.88
MSH2YOL090W ROY1Q04847 553 aa3.29□□□□□ -1.88
MSH2YOL090W ADY4Q05955 493 aa3.29□□□□□ -1.88
MSH2YOL090W YLR456WQ06199 204 aa3.29□□□□□ -1.88
MSH2YOL090W VAM6Q07468 1049 aa3.29□□□□□ -1.88
MSH2YOL090W RCN2Q12044 265 aa3.29□□□□□ -1.88
MSH2YOL090W CHS5Q12114 671 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W CFT1Q06632 1357 aaKnown RBP3.29□□□□□ -1.88
MSH2YOL090W YLR302CO13544 120 aa3.28□□□□□ -1.88
MSH2YOL090W PCK1P10963 549 aa3.28□□□□□ -1.88
MSH2YOL090W SNT1P25357 1226 aa3.28□□□□□ -1.88
MSH2YOL090W VPS17P32913 551 aa3.28□□□□□ -1.88
MSH2YOL090W TYE7P33122 291 aaPredicted RBP3.28□□□□□ -1.88
MSH2YOL090W YSW1P38280 609 aa3.28□□□□□ -1.88
MSH2YOL090W SEC9P40357 651 aa3.28□□□□□ -1.88
MSH2YOL090W LEM3P42838 414 aa3.28□□□□□ -1.88
MSH2YOL090W TAM41P53230 385 aa3.28□□□□□ -1.88
MSH2YOL090W YGR266WP53326 701 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms