RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C CLP1Q08685 445 aaPredicted RBP3.25□□□□□ -1.89
SSN8YNL025C CWC2Q12046 339 aaPredicted RBP3.25□□□□□ -1.89
SSN8YNL025C MDY2Q12285 212 aa3.25□□□□□ -1.89
SSN8YNL025C PGA3Q12746 312 aaKnown RBP3.25□□□□□ -1.89
SSN8YNL025C SWI6P09959 803 aa3.24□□□□□ -1.89
SSN8YNL025C CDC24P11433 854 aaPredicted RBP3.24□□□□□ -1.89
SSN8YNL025C NCP1P16603 691 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C CBP3P21560 335 aa3.24□□□□□ -1.89
SSN8YNL025C CLB3P24870 427 aa3.24□□□□□ -1.89
SSN8YNL025C PHO84P25297 587 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C DGR2P32330 852 aa3.24□□□□□ -1.89
SSN8YNL025C MRP4P32902 394 aa3.24□□□□□ -1.89
SSN8YNL025C VPS17P32913 551 aa3.24□□□□□ -1.89
SSN8YNL025C PPQ1P32945 549 aa3.24□□□□□ -1.89
SSN8YNL025C COY1P34237 679 aa3.24□□□□□ -1.89
SSN8YNL025C COS111P38308 924 aa3.24□□□□□ -1.89
SSN8YNL025C CTM1P38818 585 aa3.24□□□□□ -1.89
SSN8YNL025C YMR124WP39523 943 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C SWD1P39706 426 aa3.24□□□□□ -1.89
SSN8YNL025C SCS2P40075 244 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C SEC9P40357 651 aa3.24□□□□□ -1.89
SSN8YNL025C LCB2P40970 561 aa3.24□□□□□ -1.89
SSN8YNL025C ARC1P46672 376 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C YGR250CP53316 781 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C NOG2P53742 486 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C GIM3P53900 129 aa3.24□□□□□ -1.89
SSN8YNL025C GPD1Q00055 391 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C EGD1Q02642 157 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C HOT1Q03213 719 aa3.24□□□□□ -1.89
SSN8YNL025C RBA50Q04418 439 aa3.24□□□□□ -1.89
SSN8YNL025C SNO4Q04902 237 aa3.24□□□□□ -1.89
SSN8YNL025C TRI1Q05024 226 aa3.24□□□□□ -1.89
SSN8YNL025C PHO92Q06390 306 aa3.24□□□□□ -1.89
SSN8YNL025C MCP2Q06567 569 aa3.24□□□□□ -1.89
SSN8YNL025C TSR1Q07381 788 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C IWR1Q07532 353 aaPredicted RBP3.24□□□□□ -1.89
SSN8YNL025C HSP33Q08914 237 aaKnown RBP3.24□□□□□ -1.89
SSN8YNL025C PCL8Q08966 492 aa3.24□□□□□ -1.89
SSN8YNL025C HSP32Q08992 237 aa3.24□□□□□ -1.89
SSN8YNL025C ENV7Q12003 364 aa3.24□□□□□ -1.89
SSN8YNL025C RCN2Q12044 265 aa3.24□□□□□ -1.89
SSN8YNL025C YBR126W-AQ8TGU7 68 aa3.24□□□□□ -1.89
SSN8YNL025C RPS9AO13516 197 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C LAT1P12695 482 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C MDH1P17505 334 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SSN8YNL025C PRP4P20053 465 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C BET2P20133 325 aa3.23□□□□□ -1.89
SSN8YNL025C MRPL25P23369 157 aa3.23□□□□□ -1.89
SSN8YNL025C RRP7P25368 297 aaPredicted RBP3.23□□□□□ -1.89
SSN8YNL025C ILV6P25605 309 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C GCS1P35197 352 aa3.23□□□□□ -1.89
SSN8YNL025C MRPL40P36534 297 aa3.23□□□□□ -1.89
SSN8YNL025C YBL028CP38202 106 aa3.23□□□□□ -1.89
SSN8YNL025C YBR053CP38235 358 aa3.23□□□□□ -1.89
SSN8YNL025C DUN1P39009 513 aa3.23□□□□□ -1.89
SSN8YNL025C FLC2P39719 783 aa3.23□□□□□ -1.89
SSN8YNL025C BUD16P39988 312 aa3.23□□□□□ -1.89
SSN8YNL025C YJR061WP40355 935 aa3.23□□□□□ -1.89
SSN8YNL025C SPO22P40511 975 aa3.23□□□□□ -1.89
SSN8YNL025C RLP7P40693 322 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C FKH2P41813 862 aa3.23□□□□□ -1.89
SSN8YNL025C SKP2P42843 763 aa3.23□□□□□ -1.89
SSN8YNL025C EPL1P43572 832 aa3.23□□□□□ -1.89
SSN8YNL025C LIA1P47120 325 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C MUP1P50276 574 aa3.23□□□□□ -1.89
SSN8YNL025C TAD1P53065 400 aa3.23□□□□□ -1.89
SSN8YNL025C DUO1P53168 247 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C CGR1P53188 120 aa3.23□□□□□ -1.89
SSN8YNL025C RPN14P53196 417 aa3.23□□□□□ -1.89
SSN8YNL025C LSC1P53598 329 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C TOF1P53840 1238 aa3.23□□□□□ -1.89
SSN8YNL025C VPS75P53853 264 aa3.23□□□□□ -1.89
SSN8YNL025C MAK10Q02197 733 aa3.23□□□□□ -1.89
SSN8YNL025C RSF1Q05043 376 aa3.23□□□□□ -1.89
SSN8YNL025C YLR345WQ06137 509 aa3.23□□□□□ -1.89
SSN8YNL025C LUC7Q07508 261 aaPredicted RBP3.23□□□□□ -1.89
SSN8YNL025C CTI6Q08923 506 aa3.23□□□□□ -1.89
SSN8YNL025C TGL5Q12043 749 aa3.23□□□□□ -1.89
SSN8YNL025C MRH1Q12117 320 aaPredicted RBP3.23□□□□□ -1.89
SSN8YNL025C NMD4Q12129 218 aa3.23□□□□□ -1.89
SSN8YNL025C RPS21BQ3E754 87 aaKnown RBP3.23□□□□□ -1.89
SSN8YNL025C YOR111WQ99210 232 aa3.23□□□□□ -1.89
SSN8YNL025C DIF1O13577 133 aa3.22□□□□□ -1.89
SSN8YNL025C CPA2P03965 1118 aaKnown RBP3.22□□□□□ -1.89
SSN8YNL025C RPL6BP05739 176 aaKnown RBP3.22□□□□□ -1.89
SSN8YNL025C TPK1P06244 397 aa3.22□□□□□ -1.89
SSN8YNL025C ADH4P10127 382 aa3.22□□□□□ -1.89
SSN8YNL025C THR1P17423 357 aaKnown RBP3.22□□□□□ -1.89
SSN8YNL025C SIR1P21691 654 aa3.22□□□□□ -1.89
SSN8YNL025C ATP12P22135 325 aa3.22□□□□□ -1.89
SSN8YNL025C VPS3P23643 1011 aa3.22□□□□□ -1.89
SSN8YNL025C CLB1P24868 471 aa3.22□□□□□ -1.89
SSN8YNL025C POT1P27796 417 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SSN8YNL025C YEL043WP32618 956 aa3.22□□□□□ -1.89
SSN8YNL025C YUH1P35127 236 aa3.22□□□□□ -1.89
SSN8YNL025C SIF2P38262 535 aa3.22□□□□□ -1.89
SSN8YNL025C IFA38P38286 347 aa3.22□□□□□ -1.89
SSN8YNL025C GND1P38720 489 aaKnown RBP3.22□□□□□ -1.89
SSN8YNL025C REV7P38927 245 aa3.22□□□□□ -1.89
SSN8YNL025C STT3P39007 718 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms