RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ORC5P50874 479 aa3.15□□□□□ -1.91
CTK3YML112W ESF2P53743 316 aaKnown RBP3.15□□□□□ -1.91
CTK3YML112W CEG1Q01159 459 aaPredicted RBP3.15□□□□□ -1.91
CTK3YML112W SNA4Q07549 140 aa3.15□□□□□ -1.91
CTK3YML112W SRL1Q08673 210 aa3.15□□□□□ -1.91
CTK3YML112W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
CTK3YML112W YBR255C-AQ3E776 120 aa3.15□□□□□ -1.91
CTK3YML112W PDE1P22434 369 aa3.14□□□□□ -1.91
CTK3YML112W SCO2P38072 301 aa3.14□□□□□ -1.91
CTK3YML112W ERC1P38767 581 aa3.14□□□□□ -1.91
CTK3YML112W TOM71P38825 639 aaKnown RBP3.14□□□□□ -1.91
CTK3YML112W UBP7P40453 1071 aa3.14□□□□□ -1.91
CTK3YML112W YIR016WP40572 265 aa3.14□□□□□ -1.91
CTK3YML112W NPA3P47122 385 aa3.14□□□□□ -1.91
CTK3YML112W NUP53Q03790 475 aa3.14□□□□□ -1.91
CTK3YML112W ECM22Q05958 814 aaPredicted RBP3.14□□□□□ -1.91
CTK3YML112W LEA1Q08963 238 aaPredicted RBP3.14□□□□□ -1.91
CTK3YML112W ICL2Q12031 575 aa3.14□□□□□ -1.91
CTK3YML112W UBX3Q12229 455 aa3.14□□□□□ -1.91
CTK3YML112W ARP7Q12406 477 aa3.14□□□□□ -1.91
CTK3YML112W RRI1Q12468 440 aa3.14□□□□□ -1.91
CTK3YML112W CNA1P23287 553 aa3.13□□□□□ -1.91
CTK3YML112W ATO2P32907 282 aa3.13□□□□□ -1.91
CTK3YML112W GND1P38720 489 aaKnown RBP3.13□□□□□ -1.91
CTK3YML112W ARN1P38731 627 aa3.13□□□□□ -1.91
CTK3YML112W BOP3P53958 396 aa3.13□□□□□ -1.91
CTK3YML112W TGL2P54857 326 aa3.13□□□□□ -1.91
CTK3YML112W VTC3Q02725 835 aa3.13□□□□□ -1.91
CTK3YML112W BUD7Q08754 746 aa3.13□□□□□ -1.91
CTK3YML112W COX1P00401 534 aa3.12□□□□□ -1.91
CTK3YML112W MSS51P32335 436 aa3.12□□□□□ -1.91
CTK3YML112W MAD3P47074 515 aa3.12□□□□□ -1.91
CTK3YML112W YPR003CP53394 754 aa3.12□□□□□ -1.91
CTK3YML112W THI3Q07471 609 aa3.12□□□□□ -1.91
CTK3YML112W LAC1P28496 418 aa3.11□□□□□ -1.91
CTK3YML112W FRD1P32614 470 aaKnown RBP3.11□□□□□ -1.91
CTK3YML112W NIC96P34077 839 aa3.11□□□□□ -1.91
CTK3YML112W GCS1P35197 352 aa3.11□□□□□ -1.91
CTK3YML112W STT3P39007 718 aaKnown RBP3.11□□□□□ -1.91
CTK3YML112W FUN12P39730 1002 aaKnown RBP3.11□□□□□ -1.91
CTK3YML112W CAB2P40506 365 aa3.11□□□□□ -1.91
CTK3YML112W YPT11P48559 417 aa3.11□□□□□ -1.91
CTK3YML112W YPL108WQ02872 168 aaPredicted RBP3.11□□□□□ -1.91
CTK3YML112W SND1Q04007 877 aa3.11□□□□□ -1.91
CTK3YML112W PDR8Q06149 701 aa3.11□□□□□ -1.91
CTK3YML112W NEW1Q08972 1196 aaKnown RBP3.11□□□□□ -1.91
CTK3YML112W RVB2Q12464 471 aaKnown RBP3.11□□□□□ -1.91
CTK3YML112W MPD2Q99316 277 aa3.11□□□□□ -1.91
CTK3YML112W HES1P35843 434 aa3.1□□□□□ -1.91
CTK3YML112W UBX6P47049 396 aa3.1□□□□□ -1.91
CTK3YML112W YNL144CP53907 740 aa3.1□□□□□ -1.91
CTK3YML112W YOL114CQ12322 202 aa3.1□□□□□ -1.91
CTK3YML112W SIR1P21691 654 aa3.09□□□□□ -1.91
CTK3YML112W YCR043CP25361 127 aa3.09□□□□□ -1.91
CTK3YML112W YIL152WP40455 235 aa3.09□□□□□ -1.91
CTK3YML112W CDC1P40986 491 aa3.09□□□□□ -1.91
CTK3YML112W YRB30P53107 440 aaPredicted RBP3.09□□□□□ -1.91
CTK3YML112W YGR079WP53249 370 aa3.09□□□□□ -1.91
CTK3YML112W TEP1P53916 434 aa3.09□□□□□ -1.91
CTK3YML112W ATG21Q02887 496 aa3.09□□□□□ -1.91
CTK3YML112W YDR109CQ04585 715 aa3.09□□□□□ -1.91
CTK3YML112W GSH2Q08220 491 aa3.09□□□□□ -1.91
CTK3YML112W SST2P11972 698 aaKnown RBP3.08□□□□□ -1.92
CTK3YML112W POL3P15436 1097 aa3.08□□□□□ -1.92
CTK3YML112W URK1P27515 501 aa3.08□□□□□ -1.92
CTK3YML112W OCT1P35999 772 aa3.08□□□□□ -1.92
CTK3YML112W VPS41P38959 992 aa3.08□□□□□ -1.92
CTK3YML112W TPA1P40032 644 aaKnown RBP3.08□□□□□ -1.92
CTK3YML112W PEX8P53248 589 aa3.08□□□□□ -1.92
CTK3YML112W DSE3Q08729 430 aa3.08□□□□□ -1.92
CTK3YML112W TMA7Q3E764 64 aaKnown RBP3.08□□□□□ -1.92
CTK3YML112W ADE3P07245 946 aaKnown RBP3.07□□□□□ -1.92
CTK3YML112W YCR006CP25350 157 aa3.07□□□□□ -1.92
CTK3YML112W TES1P41903 349 aaKnown RBP3.07□□□□□ -1.92
CTK3YML112W MSY1P48527 492 aa3.07□□□□□ -1.92
CTK3YML112W TAN1P53072 289 aaPredicted RBP3.07□□□□□ -1.92
CTK3YML112W GTB1Q04924 702 aa3.07□□□□□ -1.92
CTK3YML112W YMR034CQ05131 434 aaPredicted RBP3.07□□□□□ -1.92
CTK3YML112W PIG1Q06216 648 aa3.07□□□□□ -1.92
CTK3YML112W IWR1Q07532 353 aaPredicted RBP3.07□□□□□ -1.92
CTK3YML112W MCH4Q08268 501 aa3.07□□□□□ -1.92
CTK3YML112W SUL2Q12325 893 aa3.07□□□□□ -1.92
CTK3YML112W RIT1P23796 513 aa3.06□□□□□ -1.92
CTK3YML112W MCM3P24279 971 aaKnown RBP3.06□□□□□ -1.92
CTK3YML112W RGT1P32862 1170 aa3.06□□□□□ -1.92
CTK3YML112W YKL133CP36066 463 aa3.06□□□□□ -1.92
CTK3YML112W APM3P38153 483 aa3.06□□□□□ -1.92
CTK3YML112W ARC40P38328 384 aaKnown RBP3.06□□□□□ -1.92
CTK3YML112W MET30P39014 640 aa3.06□□□□□ -1.92
CTK3YML112W BUD16P39988 312 aa3.06□□□□□ -1.92
CTK3YML112W YAT2P40017 923 aa3.06□□□□□ -1.92
CTK3YML112W SKP2P42843 763 aa3.06□□□□□ -1.92
CTK3YML112W VPS25P47142 202 aa3.06□□□□□ -1.92
CTK3YML112W UBP8P50102 471 aa3.06□□□□□ -1.92
CTK3YML112W MTG1Q03151 367 aaPredicted RBP3.06□□□□□ -1.92
CTK3YML112W MLH2Q07980 695 aa3.06□□□□□ -1.92
CTK3YML112W NDD1Q08887 554 aa3.06□□□□□ -1.92
CTK3YML112W RPL42AP0CX27 106 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W RPL42BP0CX28 106 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W YFL068WP0CX99 160 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms