RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C VPS3P23643 1011 aa12.44□□□□□ -0.42
BDF1YLR399C MEI4P29467 408 aa12.44□□□□□ -0.42
BDF1YLR399C SKG6P32900 734 aaPredicted RBP12.44□□□□□ -0.42
BDF1YLR399C BZZ1P38822 633 aa12.44□□□□□ -0.42
BDF1YLR399C SPC105P53148 917 aa12.44□□□□□ -0.42
BDF1YLR399C CUS2P53830 285 aaPredicted RBP12.44□□□□□ -0.42
BDF1YLR399C MCP2Q06567 569 aa12.44□□□□□ -0.42
BDF1YLR399C PUS7Q08647 676 aaKnown RBP12.44□□□□□ -0.42
BDF1YLR399C THP3Q12049 470 aaKnown RBP12.44□□□□□ -0.42
BDF1YLR399C KCS1Q12494 1050 aa12.44□□□□□ -0.42
BDF1YLR399C AI5_BETAQ9ZZX0 354 aa12.44□□□□□ -0.42
BDF1YLR399C ATG14P38270 344 aa12.44□□□□□ -0.42
BDF1YLR399C SET4P42948 560 aa12.44□□□□□ -0.42
BDF1YLR399C HAM1P47119 197 aaKnown RBP12.44□□□□□ -0.42
BDF1YLR399C RCF1Q03713 159 aa12.44□□□□□ -0.42
BDF1YLR399C ULA1Q12059 462 aa12.44□□□□□ -0.42
BDF1YLR399C RGS2Q99188 309 aa12.44□□□□□ -0.42
BDF1YLR399C NHA1Q99271 985 aa12.44□□□□□ -0.42
BDF1YLR399C SSD1P24276 1250 aaKnown RBP RIP-Chip data12.43□□□□□ -0.42not detected
BDF1YLR399C HSP30P25619 332 aa12.43□□□□□ -0.42
BDF1YLR399C PAT1P25644 796 aaKnown RBP12.43□□□□□ -0.42
BDF1YLR399C UBP11P36026 717 aa12.43□□□□□ -0.42
BDF1YLR399C AGP3P43548 558 aa12.43□□□□□ -0.42
BDF1YLR399C ARE2P53629 642 aaKnown RBP12.43□□□□□ -0.42
BDF1YLR399C CNM67P53865 581 aaKnown RBP12.43□□□□□ -0.42
BDF1YLR399C GLO2Q05584 274 aa12.43□□□□□ -0.42
BDF1YLR399C ATG29Q12092 213 aa12.43□□□□□ -0.42
BDF1YLR399C NCR1Q12200 1170 aa12.43□□□□□ -0.42
BDF1YLR399C HKR1P41809 1802 aa12.43□□□□□ -0.42
BDF1YLR399C HXT3P32466 567 aaKnown RBP12.42□□□□□ -0.42
BDF1YLR399C PTC1P35182 281 aa12.42□□□□□ -0.42
BDF1YLR399C YBR259WP38338 688 aa12.42□□□□□ -0.42
BDF1YLR399C MEF2P39677 819 aa12.42□□□□□ -0.42
BDF1YLR399C SER33P40510 469 aa12.42□□□□□ -0.42
BDF1YLR399C DIE2P50076 525 aa12.42□□□□□ -0.42
BDF1YLR399C COG5P53951 403 aa12.42□□□□□ -0.42
BDF1YLR399C RSN1Q03516 953 aa12.42□□□□□ -0.42
BDF1YLR399C YDL124WQ07551 312 aaKnown RBP12.42□□□□□ -0.42
BDF1YLR399C MET17P06106 444 aa12.42□□□□□ -0.42
BDF1YLR399C CLN2P20438 545 aa12.42□□□□□ -0.42
BDF1YLR399C PHO3P24031 467 aa12.42□□□□□ -0.42
BDF1YLR399C CLG1P35190 452 aa12.42□□□□□ -0.42
BDF1YLR399C YHB1P39676 399 aaKnown RBP12.42□□□□□ -0.42
BDF1YLR399C YJR061WP40355 935 aa12.42□□□□□ -0.42
BDF1YLR399C PUS2P53167 370 aa12.42□□□□□ -0.42
BDF1YLR399C RSC9Q03124 581 aa12.42□□□□□ -0.42
BDF1YLR399C YMR160WQ03823 816 aa12.42□□□□□ -0.42
BDF1YLR399C RRP9Q06506 573 aaKnown RBP12.42□□□□□ -0.42
BDF1YLR399C VPS33P20795 691 aa12.41□□□□□ -0.42
BDF1YLR399C RPS7AP26786 190 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C PCM1P38628 557 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C CKB2P38930 258 aa12.41□□□□□ -0.42
BDF1YLR399C AVT2P39981 480 aa12.41□□□□□ -0.42
BDF1YLR399C RAI1P53063 387 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C PEX10Q05568 337 aa12.41□□□□□ -0.42
BDF1YLR399C GMC2Q06201 188 aa12.41□□□□□ -0.42
BDF1YLR399C DTD1Q07648 150 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C MUM3Q08750 479 aa12.41□□□□□ -0.42
BDF1YLR399C HIR2P32480 875 aa12.41□□□□□ -0.42
BDF1YLR399C HCS1P34243 683 aa12.41□□□□□ -0.42
BDF1YLR399C WHI3P34761 661 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C KRE29P40026 464 aa12.41□□□□□ -0.42
BDF1YLR399C IMD3P50095 523 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C NOG1Q02892 647 aaKnown RBP12.41□□□□□ -0.42
BDF1YLR399C DML1Q03652 475 aa12.41□□□□□ -0.42
BDF1YLR399C MED2Q12124 431 aa12.41□□□□□ -0.42
BDF1YLR399C HSH49Q99181 213 aaPredicted RBP12.41□□□□□ -0.42
BDF1YLR399C ECM3Q99252 613 aa12.41□□□□□ -0.42
BDF1YLR399C RIF1P29539 1916 aa12.4□□□□□ -0.42
BDF1YLR399C FBA1P14540 359 aaKnown RBP12.4□□□□□ -0.42
BDF1YLR399C CMK2P22517 447 aa12.4□□□□□ -0.42
BDF1YLR399C AMS1P22855 1083 aa12.4□□□□□ -0.42
BDF1YLR399C SEC1P30619 724 aaKnown RBP12.4□□□□□ -0.42
BDF1YLR399C PHA2P32452 334 aa12.4□□□□□ -0.42
BDF1YLR399C RFS1P38234 210 aaKnown RBP12.4□□□□□ -0.42
BDF1YLR399C YHR078WP38799 552 aa12.4□□□□□ -0.42
BDF1YLR399C FIS1P40515 155 aa12.4□□□□□ -0.42
BDF1YLR399C ELP2P42935 788 aa12.4□□□□□ -0.42
BDF1YLR399C IRC3Q06683 689 aa12.4□□□□□ -0.42
BDF1YLR399C SYO1Q07395 620 aa12.4□□□□□ -0.42
BDF1YLR399C YCR015CP25616 317 aa12.39□□□□□ -0.43
BDF1YLR399C QNS1P38795 714 aaKnown RBP12.39□□□□□ -0.43
BDF1YLR399C PSF2P40359 213 aa12.39□□□□□ -0.43
BDF1YLR399C BIR1P47134 954 aa12.39□□□□□ -0.43
BDF1YLR399C RHO2P06781 192 aa12.39□□□□□ -0.43
BDF1YLR399C SSA4P22202 642 aaKnown RBP12.39□□□□□ -0.43
BDF1YLR399C YJU2P28320 278 aaPredicted RBP12.39□□□□□ -0.43
BDF1YLR399C DAL1P32375 460 aa12.39□□□□□ -0.43
BDF1YLR399C PRP19P32523 503 aaKnown RBP12.39□□□□□ -0.43
BDF1YLR399C UGA4P32837 571 aa12.39□□□□□ -0.43
BDF1YLR399C PAC11P40960 533 aa12.39□□□□□ -0.43
BDF1YLR399C RTT101P47050 842 aa12.39□□□□□ -0.43
BDF1YLR399C AVT1P47082 602 aa12.39□□□□□ -0.43
BDF1YLR399C GNP1P48813 663 aa12.39□□□□□ -0.43
BDF1YLR399C GCV2P49095 1034 aa12.39□□□□□ -0.43
BDF1YLR399C ROD1Q02805 837 aa12.39□□□□□ -0.43
BDF1YLR399C TAF11Q04226 346 aa12.39□□□□□ -0.43
BDF1YLR399C WHI5Q12416 295 aa12.39□□□□□ -0.43
BDF1YLR399C GPM1P00950 247 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C MSS18P08593 268 aa12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms