RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	LTV1	P34078	463 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	GEX2	P36173	615 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	ALA1	P40825	983 aa	Known RBP	15.78	■□□□□ 0.12
CCC1	YLR220W	BUD13	P46947	266 aa	Predicted RBP	15.78	■□□□□ 0.12
CCC1	YLR220W	VEL1	P53058	206 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	FLC3	P53121	802 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	CDC14	Q00684	551 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	STE23	Q06010	1027 aa		15.78	■□□□□ 0.12
CCC1	YLR220W	DAL81	P21657	970 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	KAR4	P25583	335 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	TGL4	P36165	910 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	AIM23	P47015	356 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	AIM14	P53109	570 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	ADE13	Q05911	482 aa	Known RBP	15.77	■□□□□ 0.12
CCC1	YLR220W	LDB18	Q07887	179 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	IRC10	Q08118	586 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	TRE2	Q08693	809 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	YKL068W-A	Q3E826	78 aa		15.77	■□□□□ 0.12
CCC1	YLR220W	MRM1	P25270	412 aa		15.76	■□□□□ 0.11
CCC1	YLR220W	YNR065C	P53751	1116 aa		15.76	■□□□□ 0.11
CCC1	YLR220W	SLT2	Q00772	484 aa		15.76	■□□□□ 0.11
CCC1	YLR220W	SLU7	Q02775	382 aa	Known RBP	15.76	■□□□□ 0.11
CCC1	YLR220W	PIR1	Q03178	341 aa		15.76	■□□□□ 0.11
CCC1	YLR220W	SST2	P11972	698 aa	Known RBP	15.75	■□□□□ 0.11
CCC1	YLR220W	HSP60	P19882	572 aa	Known RBP	15.75	■□□□□ 0.11
CCC1	YLR220W	PYK2	P52489	506 aa	Known RBP	15.75	■□□□□ 0.11
CCC1	YLR220W	SLD7	Q08457	257 aa		15.75	■□□□□ 0.11
CCC1	YLR220W	PER33	Q12144	273 aa		15.75	■□□□□ 0.11
CCC1	YLR220W	TEF1	P02994	458 aa	Known RBP	15.74	■□□□□ 0.11
CCC1	YLR220W	URA10	P30402	227 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	NDI1	P32340	513 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	ALY1	P36117	915 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	CCT2	P39076	527 aa	Known RBP	15.74	■□□□□ 0.11
CCC1	YLR220W	OSW5	P40219	148 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	YFL012W	P43580	148 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	URB2	P47108	1174 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	TIM13	P53299	105 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	ORC3	P54790	616 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	RSC4	Q02206	625 aa		15.74	■□□□□ 0.11
CCC1	YLR220W	RAD1	P06777	1100 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	CLN1	P20437	546 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	MRPL25	P23369	157 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	ECM32	P32644	1121 aa	Known RBP	15.73	■□□□□ 0.11
CCC1	YLR220W	PEX5	P35056	612 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	LSB3	P43603	459 aa	Known RBP	15.73	■□□□□ 0.11
CCC1	YLR220W	USA1	Q03714	838 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	LDB17	Q12342	491 aa		15.73	■□□□□ 0.11
CCC1	YLR220W	ARG4	P04076	463 aa	Predicted RBP	15.72	■□□□□ 0.11
CCC1	YLR220W	ILV2	P07342	687 aa	Known RBP	15.72	■□□□□ 0.11
CCC1	YLR220W	RPB2	P08518	1224 aa	Known RBP	15.72	■□□□□ 0.11
CCC1	YLR220W	INO1	P11986	533 aa		15.72	■□□□□ 0.11
CCC1	YLR220W	ILV6	P25605	309 aa	Known RBP	15.72	■□□□□ 0.11
CCC1	YLR220W	LIP5	P32875	414 aa		15.72	■□□□□ 0.11
CCC1	YLR220W	PRM1	P53835	661 aa		15.72	■□□□□ 0.11
CCC1	YLR220W	SCH9	P11792	824 aa	Known RBP	15.71	■□□□□ 0.11
CCC1	YLR220W	YCL068C	P25593	260 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	STE5	P32917	917 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	ARP1	P38696	384 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	RPL34B	P40525	121 aa	Known RBP	15.71	■□□□□ 0.11
CCC1	YLR220W	ZIP2	P53061	704 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	NOP15	P53927	220 aa	Predicted RBP	15.71	■□□□□ 0.11
CCC1	YLR220W	NUP100	Q02629	959 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	YPR084W	Q06821	456 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	RSB1	Q08417	382 aa		15.71	■□□□□ 0.11
CCC1	YLR220W	GPA2	P10823	449 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	AMS1	P22855	1083 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	YJU3	P28321	313 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	STE13	P33894	931 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	SET3	P36124	751 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	SEO1	P39709	593 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	YIR007W	P40566	764 aa		15.7	■□□□□ 0.1
CCC1	YLR220W	LCB5	Q06147	687 aa	Known RBP	15.7	■□□□□ 0.1
CCC1	YLR220W	FUS1	P11710	512 aa		15.69	■□□□□ 0.1
CCC1	YLR220W	MNE1	P24720	663 aa		15.69	■□□□□ 0.1
CCC1	YLR220W	SPC97	P38863	823 aa		15.69	■□□□□ 0.1
CCC1	YLR220W	SIP4	P46954	829 aa		15.69	■□□□□ 0.1
CCC1	YLR220W	LSC1	P53598	329 aa	Known RBP	15.69	■□□□□ 0.1
CCC1	YLR220W	YNR061C	P53747	219 aa		15.69	■□□□□ 0.1
CCC1	YLR220W	KTR5	P53966	522 aa	Predicted RBP	15.69	■□□□□ 0.1
CCC1	YLR220W	MSF1	P08425	469 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	AEP1	P32493	518 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	CCT8	P47079	568 aa	Known RBP	15.68	■□□□□ 0.1
CCC1	YLR220W	COG1	P53079	417 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	FAP1	P53971	965 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	REG1	Q00816	1014 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	SFH1	Q06168	426 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	BUD20	Q08004	166 aa	Predicted RBP	15.68	■□□□□ 0.1
CCC1	YLR220W	YLR149C	Q99296	730 aa		15.68	■□□□□ 0.1
CCC1	YLR220W	CET1	O13297	549 aa	Predicted RBP	15.67	■□□□□ 0.1
CCC1	YLR220W	YSP3	P25036	478 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	TFA2	P36145	328 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	PAN6	P40459	309 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	BIO5	P53744	561 aa	Known RBP	15.67	■□□□□ 0.1
CCC1	YLR220W	RNT1	Q02555	471 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	NHX1	Q04121	633 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	YPR114W	Q06107	315 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	YEL077C	Q3E7X8	1277 aa		15.67	■□□□□ 0.1
CCC1	YLR220W	FAB1	P34756	2278 aa		15.66	■□□□□ 0.1
CCC1	YLR220W	PYC2	P32327	1180 aa	Known RBP	15.66	■□□□□ 0.1
CCC1	YLR220W	BEM3	P32873	1128 aa		15.66	■□□□□ 0.1

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms