RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	KAP123	P40069	1113 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	NDE1	P40215	560 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	ESL1	P40456	1118 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	HYR1	P40581	163 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	YDL183C	P48569	320 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	SQS1	P53866	767 aa	Known RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	SSL2	Q00578	843 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	SYF1	Q04048	859 aa	Predicted RBP	3.56	□□□□□ -1.84
YPS6	YIR039C	TMA10	Q06177	86 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	AAD4	Q07747	329 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	TGL5	Q12043	749 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	ATG11	Q12527	1178 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	ECM3	Q99252	613 aa		3.56	□□□□□ -1.84
YPS6	YIR039C	CDC31	P06704	161 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	GUK1	P15454	187 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
YPS6	YIR039C	SWI4	P25302	1093 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	KIN82	P25341	720 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	CTF13	P35203	478 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
YPS6	YIR039C	IFA38	P38286	347 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	NPR3	P38742	1146 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	YHL017W	P38745	532 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	CCT3	P39077	534 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	GET2	P40056	285 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	TAH11	P47112	604 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SRB7	P47822	140 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	MNN10	P50108	393 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	GAD1	Q04792	585 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SPN1	Q06505	410 aa	Predicted RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	TSR2	Q06672	205 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	DIB1	Q06819	143 aa	Predicted RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	CRD1	Q07560	283 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	PSK2	Q08217	1101 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SDH5	Q08230	162 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	YPL150W	Q12152	901 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	HOS1	Q12214	470 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	POM34	Q12445	299 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	GPA1	P08539	472 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SAN1	P22470	610 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	RIT1	P23796	513 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	LCB1	P25045	558 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	KRE2	P27809	442 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	SMY1	P32364	656 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	PAH1	P32567	862 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	NFU1	P32860	256 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	MUD2	P36084	527 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	MIC60	P36112	540 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	JNM1	P36224	373 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	CRG1	P38892	291 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
YPS6	YIR039C	LYS9	P38999	446 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	VPS8	P39702	1274 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	YER130C	P39959	443 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	PSF2	P40359	213 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	DPH1	P40487	425 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	GSM1	P42950	618 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	UPF3	P48412	387 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	IMA1	P53051	589 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	PIL1	P53252	339 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	ACS1	Q01574	713 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	RPS15	Q01855	142 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	YCG1	Q06680	1035 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	CSR1	Q06705	408 aa	Known RBP	3.55	□□□□□ -1.84
YPS6	YIR039C	TRM8	Q12009	286 aa		3.55	□□□□□ -1.84
YPS6	YIR039C	ADE3	P07245	946 aa	Known RBP	3.54	□□□□□ -1.84
YPS6	YIR039C	STE11	P23561	717 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	CAD1	P24813	409 aa	Known RBP	3.54	□□□□□ -1.84
YPS6	YIR039C	KAR4	P25583	335 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	SET3	P36124	751 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	NOP16	P40007	231 aa	Known RBP	3.54	□□□□□ -1.84
YPS6	YIR039C	FTR1	P40088	404 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	YFH7	P43591	353 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	MDR1	P53258	950 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	ERG5	P54781	538 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	MRD1	Q06106	887 aa	Known RBP	3.54	□□□□□ -1.84
YPS6	YIR039C	PUS9	Q12069	462 aa		3.54	□□□□□ -1.84
YPS6	YIR039C	DDP1	Q99321	188 aa	Known RBP	3.54	□□□□□ -1.84
YPS6	YIR039C	CYB2	P00175	591 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	RPS9B	P05755	195 aa	Known RBP	3.53	□□□□□ -1.84
YPS6	YIR039C	SES1	P07284	462 aa	Known RBP	3.53	□□□□□ -1.84
YPS6	YIR039C	TUP1	P16649	713 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	VPS1	P21576	704 aa	Known RBP	3.53	□□□□□ -1.84
YPS6	YIR039C	PEX1	P24004	1043 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	CBF2	P32504	956 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	ANP1	P32629	500 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	TRM2	P33753	639 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	MRPL10	P36520	322 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	YER010C	P40011	234 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	RIC1	P40395	1056 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	POL31	P46957	487 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	SAP4	P53036	818 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	MTL1	P53214	551 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	CTK1	Q03957	528 aa	Known RBP	3.53	□□□□□ -1.84
YPS6	YIR039C	ETT1	Q08421	412 aa	Known RBP	3.53	□□□□□ -1.84
YPS6	YIR039C	ERP4	Q12450	207 aa		3.53	□□□□□ -1.84
YPS6	YIR039C	FOB1	O13329	566 aa		3.52	□□□□□ -1.85
YPS6	YIR039C	TUF1	P02992	437 aa	Known RBP	3.52	□□□□□ -1.85
YPS6	YIR039C	PCK1	P10963	549 aa		3.52	□□□□□ -1.85
YPS6	YIR039C	AAC3	P18238	307 aa		3.52	□□□□□ -1.85
YPS6	YIR039C	BET2	P20133	325 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms