RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	TWF1	P53250	332 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	EEB1	Q02891	456 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	RAD33	Q04231	177 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	PEX10	Q05568	337 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	UBX5	Q06682	500 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	NTG2	Q08214	380 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	TAH18	Q12181	623 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	HER1	Q12276	1246 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	YOR214C	Q12282	236 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	DGK1	Q12382	290 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	LAG2	Q92325	660 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	YOS9	Q99220	542 aa		3.18	□□□□□ -1.9
RPN1	YHR027C	ATP2	P00830	511 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	TOP3	P13099	656 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	HOM2	P13663	365 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	PRI2	P20457	528 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	CNB1	P25296	175 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	DOA4	P32571	926 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	PPQ1	P32945	549 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	PRP40	P33203	583 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	TRM2	P33753	639 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	SIP2	P34164	415 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	RPC25	P35718	212 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	MCD4	P36051	919 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	RXT2	P38255	430 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	MSR1	P38714	643 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	TRM5	P38793	499 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	SAH1	P39954	449 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	BIM1	P40013	344 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	TAD1	P53065	400 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	MLC1	P53141	149 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	MNT4	P53745	580 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	APP1	P53933	587 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	DID2	P69771	204 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	REC102	Q02721	264 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YDR514C	Q04408	483 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	TDA9	Q04545	1251 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YDR306C	Q06640	478 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YAP7	Q08182	245 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	CMC2	Q3E7A4	109 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	ARG81	P05085	880 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	KGD1	P20967	1014 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	YSP3	P25036	478 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	CYM1	P32898	989 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	MRT4	P33201	236 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	CCL1	P37366	393 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	ARA1	P38115	344 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
RPN1	YHR027C	MMS21	P38632	267 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	UTP9	P38882	575 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	TIF11	P38912	153 aa	Known RBP	3.17	□□□□□ -1.9
RPN1	YHR027C	GTT3	P39996	337 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YAT2	P40017	923 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	GTT1	P40582	234 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	RPC17	P47076	161 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YGR125W	P53273	1036 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	YTP1	P53584	459 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	SIW14	P53965	281 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	NHP10	Q03435	203 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	VTA1	Q06263	330 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	CDA1	Q06702	301 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	ALE1	Q08548	619 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	SSP2	Q08646	371 aa		3.17	□□□□□ -1.9
RPN1	YHR027C	HIS4	P00815	799 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	ADE8	P04161	214 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	SNF1	P06782	633 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	KSS1	P14681	368 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	RIT1	P23796	513 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	VMA16	P23968	213 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	KRR1	P25586	316 aa	Predicted RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	PTP2	P29461	750 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	AIM2	P39721	246 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PFK26	P40433	827 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	PRK1	P40494	810 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	SEC28	P40509	296 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	YJR098C	P47139	656 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PRP24	P49960	444 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	ARO8	P53090	500 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	DAM1	P53267	343 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	ZDS2	P54786	942 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	MRPL13	Q02204	264 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	YDR541C	Q03049	344 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	YMR187C	Q03236	431 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	YDR476C	Q03362	224 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	SPH1	Q06160	661 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	FMP45	Q07651	309 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	YOR342C	Q12182	319 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	ZRT2	Q12436	422 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	GRX6	Q12438	231 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PTC5	Q12511	572 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	YBL029C-A	Q3E756	94 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
RPN1	YHR027C	TPK2	P06245	380 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	MRP7	P12687	371 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	GRX2	P17695	143 aa	Known RBP	3.16	□□□□□ -1.9
RPN1	YHR027C	YCR101C	P25607	182 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	DGR2	P32330	852 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PET127	P32606	800 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	PMT1	P33775	817 aa		3.16	□□□□□ -1.9
RPN1	YHR027C	EDS1	P38073	919 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms