RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	GSF2	Q04697	403 aa	Known RBP	4.63	□□□□□ -1.67
PEX21	YGR239C	YML053C	Q04978	212 aa		4.63	□□□□□ -1.67
PEX21	YGR239C	VIP1	Q06685	1146 aa	Known RBP	4.63	□□□□□ -1.67
PEX21	YGR239C	SWT1	Q12104	458 aa		4.63	□□□□□ -1.67
PEX21	YGR239C	ACF2	Q12168	779 aa		4.63	□□□□□ -1.67
PEX21	YGR239C	MRP7	P12687	371 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	STE12	P13574	688 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	SPO16	P17122	198 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	RNR3	P21672	869 aa	Known RBP	4.62	□□□□□ -1.67
PEX21	YGR239C	KIN3	P22209	435 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	RBG2	P53295	368 aa	Known RBP	4.62	□□□□□ -1.67
PEX21	YGR239C	RAD30	Q04049	632 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	CRT10	Q08226	957 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	NUS1	Q12063	375 aa		4.62	□□□□□ -1.67
PEX21	YGR239C	LYS21	Q12122	440 aa	Known RBP	4.62	□□□□□ -1.67
PEX21	YGR239C	SEM1	O94742	89 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	CDC31	P06704	161 aa	Known RBP	4.61	□□□□□ -1.67
PEX21	YGR239C	MRPL9	P31334	269 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	GDA1	P32621	518 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	ALY1	P36117	915 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	YBL029W	P38201	376 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	SRB7	P47822	140 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	STB4	P50104	949 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	DUO1	P53168	247 aa	Known RBP	4.61	□□□□□ -1.67
PEX21	YGR239C	IMO32	P53219	342 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	COG2	P53271	262 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	YDL242W	Q07746	117 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PEX21	YGR239C	TAH18	Q12181	623 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	ZPS1	Q12512	249 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	YBR126W-A	Q8TGU7	68 aa		4.61	□□□□□ -1.67
PEX21	YGR239C	RPB2	P08518	1224 aa	Known RBP	4.6	□□□□□ -1.67
PEX21	YGR239C	MET8	P15807	274 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	CDC43	P18898	376 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	AMD2	P22580	549 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	PGS1	P25578	521 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	RFA2	P26754	273 aa	Known RBP	4.6	□□□□□ -1.67
PEX21	YGR239C	MAM1	P40065	302 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	YSA1	Q01976	231 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	GFD1	Q04839	188 aa	Known RBP	4.6	□□□□□ -1.67
PEX21	YGR239C	ARP9	Q05123	467 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	SDH5	Q08230	162 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	YBR255C-A	Q3E776	120 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	YOR019W	Q99248	730 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	VCX1	Q99385	411 aa		4.6	□□□□□ -1.67
PEX21	YGR239C	COX1	P00401	534 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	AAC1	P04710	309 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	SUI3	P09064	285 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	LRE1	P25579	583 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	FMP10	P40098	244 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	CCT7	P42943	550 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	ARC1	P46672	376 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	VPS4	P52917	437 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	COQ6	P53318	479 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	RPT6	Q01939	405 aa	Known RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	GIR2	Q03768	265 aa	Predicted RBP	4.59	□□□□□ -1.67
PEX21	YGR239C	TDA9	Q04545	1251 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	RCO1	Q04779	684 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	AI5_ALPHA	Q9ZZX1	630 aa		4.59	□□□□□ -1.67
PEX21	YGR239C	FOB1	O13329	566 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	TPK2	P06245	380 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	SEC53	P07283	254 aa	Known RBP	4.58	□□□□□ -1.68
PEX21	YGR239C	WHI2	P12611	486 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	SGF29	P25554	259 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	CMK1	P27466	446 aa	Known RBP	4.58	□□□□□ -1.68
PEX21	YGR239C	PEP3	P27801	918 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	TFC3	P34111	1160 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	YPT10	P38146	199 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	TDP1	P38319	544 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	RTS1	P38903	757 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	SDS3	P40505	327 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	IRC24	P40580	263 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	SIP4	P46954	829 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	NPA3	P47122	385 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	ASN1	P49089	572 aa	Known RBP	4.58	□□□□□ -1.68
PEX21	YGR239C	MRPL19	P53875	158 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	WAR1	Q03631	944 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	YDR109C	Q04585	715 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	MFB1	Q04922	465 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	PSK2	Q08217	1101 aa		4.58	□□□□□ -1.68
PEX21	YGR239C	PRS5	Q12265	496 aa	Known RBP	4.58	□□□□□ -1.68
PEX21	YGR239C	AHA1	Q12449	350 aa	Known RBP	4.58	□□□□□ -1.68
PEX21	YGR239C	SEC3	P33332	1336 aa	Known RBP	4.57	□□□□□ -1.68
PEX21	YGR239C	CPA2	P03965	1118 aa	Known RBP	4.57	□□□□□ -1.68
PEX21	YGR239C	FUR1	P18562	216 aa	Known RBP	4.57	□□□□□ -1.68
PEX21	YGR239C	DMC1	P25453	334 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	CDC15	P27636	974 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	SAC6	P32599	642 aa	Known RBP	4.57	□□□□□ -1.68
PEX21	YGR239C	ESL2	P36168	1195 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	YMC2	P38087	329 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	AFG3	P39925	761 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	SAP1	P39955	897 aa	Known RBP	4.57	□□□□□ -1.68
PEX21	YGR239C	MIT1	P40002	666 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	JHD1	P40034	492 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	DSD1	P53095	428 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	YNL092W	P53934	400 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	SPC19	Q03954	165 aa		4.57	□□□□□ -1.68
PEX21	YGR239C	PLM2	Q04383	521 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms