RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX1	YGR193C	FUS3	P16892	353 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	AAC3	P18238	307 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YPK2	P18961	677 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	PRI2	P20457	528 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	CAD1	P24813	409 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	RDS1	P25611	832 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	NGG1	P32494	702 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YME2	P32843	850 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	SUR1	P33300	382 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	DUT1	P33317	147 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	SPC29	P33419	253 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	MTH1	P35198	433 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	PHO11	P35842	467 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	SDS22	P36047	338 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YKR015C	P36111	568 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	VPS51	P36116	164 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	PCH2	P38126	564 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	PHO12	P38693	467 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	GND1	P38720	489 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	TCD1	P38756	429 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	OSW5	P40219	148 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	ATF1	P40353	525 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	AGE2	P40529	298 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	CIR1	P42940	261 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	STU2	P46675	888 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	GCD14	P46959	383 aa	Predicted RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	VMA10	P48836	114 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	PAN2	P53010	1115 aa	Predicted RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	LCL3	P53153	274 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YGR012W	P53206	393 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YGR250C	P53316	781 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	SNF12	P53628	566 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YNL146W	P53906	100 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	EGD1	Q02642	157 aa	Known RBP	3.74	□□□□□ -1.81
PDX1	YGR193C	MUK1	Q02866	612 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	RTT103	Q05543	409 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	HRQ1	Q05549	1077 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	ECM7	Q06200	448 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	VAC14	Q06708	880 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	YLR040C	Q07988	224 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	ENB1	Q08299	606 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	DSE3	Q08729	430 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	RTT10	Q08924	1013 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	OSW2	Q12202	724 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	RBD2	Q12270	262 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	AVL9	Q12500	764 aa		3.74	□□□□□ -1.81
PDX1	YGR193C	RTC1	Q08281	1341 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	TDH1	P00360	332 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	MSS18	P08593	268 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	HSF1	P10961	833 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	CKA1	P15790	372 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	MET8	P15807	274 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
PDX1	YGR193C	PRP9	P19736	530 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	RPI1	P23250	407 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	MIH1	P23748	554 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	STE50	P25344	346 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	RRP7	P25368	297 aa	Predicted RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	YCR016W	P25617	290 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	UBC6	P33296	250 aa	Predicted RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	STE13	P33894	931 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	MUD2	P36084	527 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	TYS1	P36421	394 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	MMS4	P38257	691 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	COS111	P38308	924 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	RFC3	P38629	340 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	OSH3	P38713	996 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	MNL1	P38888	796 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	DSS1	P39112	969 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	ECM1	P39715	212 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	UBP7	P40453	1071 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	NAS2	P40555	220 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	GYP8	P43570	497 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	RMD8	P43620	662 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	MDV1	P47025	714 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	NOP9	P47077	666 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	URB2	P47108	1174 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	HSH155	P49955	971 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	MNT2	P53059	558 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	ZIP2	P53061	704 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	AIM14	P53109	570 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	MPS2	P53159	387 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	MNT4	P53745	580 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	YNR068C	P53754	272 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	FYV6	P53913	173 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
PDX1	YGR193C	YPL107W	Q02873	248 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	FCP1	Q03254	732 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	RMT2	Q03305	412 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	VBA4	Q04602	768 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	ECM18	Q04623	453 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	BLS1	Q06071	122 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	BOP2	Q06150	570 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	YLR455W	Q06188	304 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	EAF1	Q06337	982 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	GRS2	Q06817	618 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	DIB1	Q06819	143 aa	Predicted RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	WHI4	Q07655	649 aa	Known RBP	3.73	□□□□□ -1.81
PDX1	YGR193C	YLR001C	Q07895	862 aa		3.73	□□□□□ -1.81
PDX1	YGR193C	VPS54	Q12071	889 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms