RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W PEX1P24004 1043 aa2.32□□□□□ -2.04
BRP1YGL007W YCL002CP25565 263 aa2.32□□□□□ -2.04
BRP1YGL007W CDC12P32468 407 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W SLA2P33338 968 aa2.32□□□□□ -2.04
BRP1YGL007W STO1P34160 861 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W YKL097CP34245 136 aa2.32□□□□□ -2.04
BRP1YGL007W HEL1P36113 551 aa2.32□□□□□ -2.04
BRP1YGL007W MOB1P40484 314 aa2.32□□□□□ -2.04
BRP1YGL007W HIS6P40545 261 aa2.32□□□□□ -2.04
BRP1YGL007W NIT2P47016 307 aa2.32□□□□□ -2.04
BRP1YGL007W ASN1P49089 572 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W RPL4BP49626 362 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W UBC9P50623 157 aaPredicted RBP2.32□□□□□ -2.04
BRP1YGL007W NBP1P52919 319 aaPredicted RBP2.32□□□□□ -2.04
BRP1YGL007W SPC105P53148 917 aa2.32□□□□□ -2.04
BRP1YGL007W ART5P53244 586 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W ALG11P53954 548 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W STP1Q00947 519 aa2.32□□□□□ -2.04
BRP1YGL007W SRP1Q02821 542 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W RCR2Q03446 210 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W SNU56Q03782 492 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W SIZ1Q04195 904 aa2.32□□□□□ -2.04
BRP1YGL007W PIG1Q06216 648 aa2.32□□□□□ -2.04
BRP1YGL007W DNL4Q08387 944 aaPredicted RBP2.32□□□□□ -2.04
BRP1YGL007W TRE2Q08693 809 aa2.32□□□□□ -2.04
BRP1YGL007W ENV7Q12003 364 aa2.32□□□□□ -2.04
BRP1YGL007W PLP2Q12017 286 aa2.32□□□□□ -2.04
BRP1YGL007W YTM1Q12024 460 aaPredicted RBP2.32□□□□□ -2.04
BRP1YGL007W SGT2Q12118 346 aaKnown RBP2.32□□□□□ -2.04
BRP1YGL007W RRD2Q12461 358 aa2.32□□□□□ -2.04
BRP1YGL007W CTF3Q12748 733 aa2.32□□□□□ -2.04
BRP1YGL007W YLR422WQ06409 1932 aa2.32□□□□□ -2.04
BRP1YGL007W IRA2P19158 3079 aa2.32□□□□□ -2.04
BRP1YGL007W GAL80P04387 435 aa2.31□□□□□ -2.04
BRP1YGL007W RPL22AP05749 121 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W CHS1P08004 1131 aa2.31□□□□□ -2.04
BRP1YGL007W RPS21AP0C0V8 87 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W ASP3-2P0CX77 362 aa2.31□□□□□ -2.04
BRP1YGL007W ASP3-3P0CX78 362 aa2.31□□□□□ -2.04
BRP1YGL007W ASP3-4P0CX79 362 aa2.31□□□□□ -2.04
BRP1YGL007W ASP3-1P0CZ17 362 aa2.31□□□□□ -2.04
BRP1YGL007W SPO11P23179 398 aa2.31□□□□□ -2.04
BRP1YGL007W CDC15P27636 974 aa2.31□□□□□ -2.04
BRP1YGL007W HEM12P32347 362 aaPredicted RBP2.31□□□□□ -2.04
BRP1YGL007W VPH1P32563 840 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W AGP2P38090 596 aa2.31□□□□□ -2.04
BRP1YGL007W EXO84P38261 753 aa2.31□□□□□ -2.04
BRP1YGL007W SIF2P38262 535 aa2.31□□□□□ -2.04
BRP1YGL007W TSL1P38427 1098 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W ARP1P38696 384 aa2.31□□□□□ -2.04
BRP1YGL007W YHL041WP38730 149 aa2.31□□□□□ -2.04
BRP1YGL007W RIM4P38741 713 aa2.31□□□□□ -2.04
BRP1YGL007W YHR054CP38780 354 aa2.31□□□□□ -2.04
BRP1YGL007W BDH2P39713 417 aa2.31□□□□□ -2.04
BRP1YGL007W HYR1P40581 163 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W DUG1P43616 481 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W SCD6P45978 349 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
BRP1YGL007W FYV8P46949 817 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W HXT16P47185 567 aa2.31□□□□□ -2.04
BRP1YGL007W CCM1P48237 864 aaPredicted RBP2.31□□□□□ -2.04
BRP1YGL007W HSH155P49955 971 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W SPC98P53540 846 aa2.31□□□□□ -2.04
BRP1YGL007W SFB2P53953 876 aa2.31□□□□□ -2.04
BRP1YGL007W UBX4P54730 416 aa2.31□□□□□ -2.04
BRP1YGL007W SLG1P54867 378 aa2.31□□□□□ -2.04
BRP1YGL007W ECM9Q02202 377 aa2.31□□□□□ -2.04
BRP1YGL007W ATP25Q03153 612 aa2.31□□□□□ -2.04
BRP1YGL007W CEF1Q03654 590 aaPredicted RBP2.31□□□□□ -2.04
BRP1YGL007W VMS1Q04311 632 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W YDR514CQ04408 483 aa2.31□□□□□ -2.04
BRP1YGL007W TMN2Q04562 672 aa2.31□□□□□ -2.04
BRP1YGL007W DON1Q05610 365 aa2.31□□□□□ -2.04
BRP1YGL007W CDD1Q06549 142 aa2.31□□□□□ -2.04
BRP1YGL007W SHS1Q07657 551 aa2.31□□□□□ -2.04
BRP1YGL007W IRC10Q08118 586 aa2.31□□□□□ -2.04
BRP1YGL007W RPS21BQ3E754 87 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W APM4Q99186 491 aa2.31□□□□□ -2.04
BRP1YGL007W DDP1Q99321 188 aaKnown RBP2.31□□□□□ -2.04
BRP1YGL007W RIF1P29539 1916 aa2.3□□□□□ -2.04
BRP1YGL007W HMG2P12684 1045 aa2.3□□□□□ -2.04
BRP1YGL007W NAT1P12945 854 aaKnown RBP2.3□□□□□ -2.04
BRP1YGL007W PCT1P13259 424 aa2.3□□□□□ -2.04
BRP1YGL007W CDC42P19073 191 aa2.3□□□□□ -2.04
BRP1YGL007W BET2P20133 325 aa2.3□□□□□ -2.04
BRP1YGL007W IME1P21190 360 aa2.3□□□□□ -2.04
BRP1YGL007W AEP2P22136 580 aa2.3□□□□□ -2.04
BRP1YGL007W PGS1P25578 521 aa2.3□□□□□ -2.04
BRP1YGL007W IMG2P25642 146 aaPredicted RBP2.3□□□□□ -2.04
BRP1YGL007W PTP2P29461 750 aa2.3□□□□□ -2.04
BRP1YGL007W CCR4P31384 837 aaKnown RBP2.3□□□□□ -2.04
BRP1YGL007W DBF20P32328 564 aa2.3□□□□□ -2.04
BRP1YGL007W HOG1P32485 435 aa2.3□□□□□ -2.04
BRP1YGL007W MUD1P32605 298 aaKnown RBP2.3□□□□□ -2.04
BRP1YGL007W NIC96P34077 839 aa2.3□□□□□ -2.04
BRP1YGL007W EMC3P36039 253 aa2.3□□□□□ -2.04
BRP1YGL007W BIT2P38346 545 aa2.3□□□□□ -2.04
BRP1YGL007W HXT6P39003 570 aaKnown RBP2.3□□□□□ -2.04
BRP1YGL007W HXT7P39004 570 aa2.3□□□□□ -2.04
BRP1YGL007W YTA12P40341 825 aa2.3□□□□□ -2.04
BRP1YGL007W GZF3P42944 551 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms