RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	IST3	P40565	148 aa	Predicted RBP	10.27	□□□□□ -0.77
RET2	YFR051C	IML2	P47031	731 aa		10.27	□□□□□ -0.77
RET2	YFR051C	NUP84	P52891	726 aa		10.27	□□□□□ -0.77
RET2	YFR051C	EMC4	P53073	190 aa		10.27	□□□□□ -0.77
RET2	YFR051C	NPY1	P53164	384 aa		10.27	□□□□□ -0.77
RET2	YFR051C	CDC14	Q00684	551 aa		10.27	□□□□□ -0.77
RET2	YFR051C	CLU1	Q03690	1277 aa	Known RBP	10.27	□□□□□ -0.77
RET2	YFR051C	YMR160W	Q03823	816 aa		10.27	□□□□□ -0.77
RET2	YFR051C	YPR114W	Q06107	315 aa		10.27	□□□□□ -0.77
RET2	YFR051C	ATG23	Q06671	453 aa		10.27	□□□□□ -0.77
RET2	YFR051C	CDC73	Q06697	393 aa		10.27	□□□□□ -0.77
RET2	YFR051C	ACM1	Q08981	209 aa		10.27	□□□□□ -0.77
RET2	YFR051C	AVL9	Q12500	764 aa		10.27	□□□□□ -0.77
RET2	YFR051C	FMP27	Q06179	2628 aa		10.27	□□□□□ -0.77
RET2	YFR051C	GIP1	P38229	639 aa		10.26	□□□□□ -0.77
RET2	YFR051C	CAF120	P53836	1060 aa		10.26	□□□□□ -0.77
RET2	YFR051C	TDA7	P53882	636 aa	Predicted RBP	10.26	□□□□□ -0.77
RET2	YFR051C	SIW14	P53965	281 aa		10.26	□□□□□ -0.77
RET2	YFR051C	RLI1	Q03195	608 aa	Known RBP	10.26	□□□□□ -0.77
RET2	YFR051C	TRE2	Q08693	809 aa		10.26	□□□□□ -0.77
RET2	YFR051C	MSB2	P32334	1306 aa		10.26	□□□□□ -0.77
RET2	YFR051C	LEU1	P07264	779 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	SPO16	P17122	198 aa		10.25	□□□□□ -0.77
RET2	YFR051C	PRP9	P19736	530 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	NDI1	P32340	513 aa		10.25	□□□□□ -0.77
RET2	YFR051C	CNS1	P33313	385 aa		10.25	□□□□□ -0.77
RET2	YFR051C	TCD2	P36101	447 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	TFA2	P36145	328 aa		10.25	□□□□□ -0.77
RET2	YFR051C	MNT2	P53059	558 aa		10.25	□□□□□ -0.77
RET2	YFR051C	YPR003C	P53394	754 aa		10.25	□□□□□ -0.77
RET2	YFR051C	HOS1	Q12214	470 aa		10.25	□□□□□ -0.77
RET2	YFR051C	LDB17	Q12342	491 aa		10.25	□□□□□ -0.77
RET2	YFR051C	PMA2	P19657	947 aa		10.25	□□□□□ -0.77
RET2	YFR051C	RPO26	P20435	155 aa		10.25	□□□□□ -0.77
RET2	YFR051C	RRP1	P35178	278 aa	Predicted RBP	10.25	□□□□□ -0.77
RET2	YFR051C	OLA1	P38219	394 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	PIK1	P39104	1066 aa		10.25	□□□□□ -0.77
RET2	YFR051C	YJR124C	P47159	448 aa		10.25	□□□□□ -0.77
RET2	YFR051C	STR3	P53101	465 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	GND2	P53319	492 aa		10.25	□□□□□ -0.77
RET2	YFR051C	TEP1	P53916	434 aa		10.25	□□□□□ -0.77
RET2	YFR051C	RSC4	Q02206	625 aa		10.25	□□□□□ -0.77
RET2	YFR051C	MFB1	Q04922	465 aa		10.25	□□□□□ -0.77
RET2	YFR051C	HPF1	Q05164	967 aa		10.25	□□□□□ -0.77
RET2	YFR051C	RIO1	Q12196	484 aa	Known RBP	10.25	□□□□□ -0.77
RET2	YFR051C	RMP1	Q12530	201 aa		10.25	□□□□□ -0.77
RET2	YFR051C	YML002W	P0CF17	737 aa		10.24	□□□□□ -0.77
RET2	YFR051C	ERR1	P0CX10	437 aa		10.24	□□□□□ -0.77
RET2	YFR051C	ERR2	P0CX11	437 aa		10.24	□□□□□ -0.77
RET2	YFR051C	MNE1	P24720	663 aa		10.24	□□□□□ -0.77
RET2	YFR051C	DCC1	P25559	380 aa		10.24	□□□□□ -0.77
RET2	YFR051C	PMI40	P29952	429 aa	Known RBP	10.24	□□□□□ -0.77
RET2	YFR051C	SMF2	P38778	549 aa		10.24	□□□□□ -0.77
RET2	YFR051C	ERR3	P42222	437 aa		10.24	□□□□□ -0.77
RET2	YFR051C	SIP4	P46954	829 aa		10.24	□□□□□ -0.77
RET2	YFR051C	AQR1	P53943	586 aa		10.24	□□□□□ -0.77
RET2	YFR051C	VAC7	P53950	1165 aa		10.24	□□□□□ -0.77
RET2	YFR051C	RPL22B	P56628	122 aa	Known RBP	10.24	□□□□□ -0.77
RET2	YFR051C	RPL34A	P87262	121 aa	Predicted RBP	10.24	□□□□□ -0.77
RET2	YFR051C	MPC54	Q08550	464 aa		10.24	□□□□□ -0.77
RET2	YFR051C	GCR1	P07261	785 aa		10.23	□□□□□ -0.77
RET2	YFR051C	IMA3	P0CW40	589 aa		10.23	□□□□□ -0.77
RET2	YFR051C	IMA4	P0CW41	589 aa		10.23	□□□□□ -0.77
RET2	YFR051C	HEM12	P32347	362 aa	Predicted RBP	10.23	□□□□□ -0.77
RET2	YFR051C	ALY1	P36117	915 aa		10.23	□□□□□ -0.77
RET2	YFR051C	GIP4	P39732	760 aa		10.23	□□□□□ -0.77
RET2	YFR051C	YNL320W	P42840	284 aa		10.23	□□□□□ -0.77
RET2	YFR051C	BUD13	P46947	266 aa	Predicted RBP	10.23	□□□□□ -0.77
RET2	YFR051C	CSN12	P47130	423 aa		10.23	□□□□□ -0.77
RET2	YFR051C	RTA1	P53047	317 aa		10.23	□□□□□ -0.77
RET2	YFR051C	SPC105	P53148	917 aa		10.23	□□□□□ -0.77
RET2	YFR051C	COG7	P53195	279 aa		10.23	□□□□□ -0.77
RET2	YFR051C	CPR6	P53691	371 aa	Known RBP	10.23	□□□□□ -0.77
RET2	YFR051C	IPI3	P53877	555 aa		10.23	□□□□□ -0.77
RET2	YFR051C	MET14	Q02196	202 aa		10.23	□□□□□ -0.77
RET2	YFR051C	IMA2	Q08295	589 aa		10.23	□□□□□ -0.77
RET2	YFR051C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	10.22	□□□□□ -0.77	not detected
RET2	YFR051C	CLN1	P20437	546 aa		10.22	□□□□□ -0.77
RET2	YFR051C	YHR078W	P38799	552 aa		10.22	□□□□□ -0.77
RET2	YFR051C	YJR061W	P40355	935 aa		10.22	□□□□□ -0.77
RET2	YFR051C	GLG2	P47011	380 aa		10.22	□□□□□ -0.77
RET2	YFR051C	TAH11	P47112	604 aa		10.22	□□□□□ -0.77
RET2	YFR051C	YMR178W	Q03219	274 aa	Known RBP	10.22	□□□□□ -0.77
RET2	YFR051C	CDC8	P00572	216 aa		10.22	□□□□□ -0.77
RET2	YFR051C	TSR4	P25040	408 aa		10.22	□□□□□ -0.77
RET2	YFR051C	GID7	P25569	745 aa		10.22	□□□□□ -0.77
RET2	YFR051C	SCD5	P34758	872 aa		10.22	□□□□□ -0.77
RET2	YFR051C	PEX5	P35056	612 aa		10.22	□□□□□ -0.77
RET2	YFR051C	SLX8	P40072	274 aa		10.22	□□□□□ -0.77
RET2	YFR051C	YNL035C	P53962	389 aa	Known RBP	10.22	□□□□□ -0.77
RET2	YFR051C	PPN1	Q04119	674 aa		10.22	□□□□□ -0.77
RET2	YFR051C	OPI10	Q08202	246 aa		10.22	□□□□□ -0.77
RET2	YFR051C	CAN1	P04817	590 aa		10.21	□□□□□ -0.78
RET2	YFR051C	CMD1	P06787	147 aa	Known RBP	10.21	□□□□□ -0.78
RET2	YFR051C	CCR4	P31384	837 aa	Known RBP	10.21	□□□□□ -0.78
RET2	YFR051C	PLC1	P32383	869 aa		10.21	□□□□□ -0.78
RET2	YFR051C	AEP1	P32493	518 aa		10.21	□□□□□ -0.78
RET2	YFR051C	DCW1	P36091	449 aa		10.21	□□□□□ -0.78
RET2	YFR051C	MSR1	P38714	643 aa		10.21	□□□□□ -0.78
RET2	YFR051C	INA22	P40576	216 aa		10.21	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms