RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YKL133C	P36066	463 aa		2.4	□□□□□ -2.03
DOT6	YER088C	SPC72	P39723	622 aa		2.4	□□□□□ -2.03
DOT6	YER088C	BST1	P43571	1029 aa		2.4	□□□□□ -2.03
DOT6	YER088C	TAX4	P47030	604 aa		2.4	□□□□□ -2.03
DOT6	YER088C	LGE1	Q02796	332 aa	Known RBP	2.4	□□□□□ -2.03
DOT6	YER088C	FMP30	Q02883	468 aa		2.4	□□□□□ -2.03
DOT6	YER088C	ICL2	Q12031	575 aa		2.4	□□□□□ -2.03
DOT6	YER088C	RRP6	Q12149	733 aa	Known RBP	2.4	□□□□□ -2.03
DOT6	YER088C	CHO2	P05374	869 aa	Known RBP	2.39	□□□□□ -2.03
DOT6	YER088C	KGD2	P19262	463 aa	Predicted RBP	2.39	□□□□□ -2.03
DOT6	YER088C	MCM3	P24279	971 aa	Known RBP	2.39	□□□□□ -2.03
DOT6	YER088C	GSY2	P27472	705 aa		2.39	□□□□□ -2.03
DOT6	YER088C	GDA1	P32621	518 aa		2.39	□□□□□ -2.03
DOT6	YER088C	SAE2	P46946	345 aa		2.39	□□□□□ -2.03
DOT6	YER088C	WAR1	Q03631	944 aa		2.39	□□□□□ -2.03
DOT6	YER088C	CIA1	Q05583	330 aa		2.39	□□□□□ -2.03
DOT6	YER088C	HRD3	Q05787	833 aa		2.39	□□□□□ -2.03
DOT6	YER088C	LCB4	Q12246	624 aa		2.39	□□□□□ -2.03
DOT6	YER088C	YMR084W	A2P2R3	262 aa		2.39	□□□□□ -2.03
DOT6	YER088C	BIK1	P11709	440 aa		2.39	□□□□□ -2.03
DOT6	YER088C	RPS7A	P26786	190 aa	Known RBP	2.39	□□□□□ -2.03
DOT6	YER088C	HOT13	P36078	116 aa		2.39	□□□□□ -2.03
DOT6	YER088C	RAD26	P40352	1085 aa		2.39	□□□□□ -2.03
DOT6	YER088C	CPR6	P53691	371 aa	Known RBP	2.39	□□□□□ -2.03
DOT6	YER088C	YDL242W	Q07746	117 aa		2.39	□□□□□ -2.03
DOT6	YER088C	FRE7	Q12333	620 aa		2.39	□□□□□ -2.03
DOT6	YER088C	GEA1	P47102	1408 aa	Predicted RBP	2.38	□□□□□ -2.03
DOT6	YER088C	HOM2	P13663	365 aa	Known RBP	2.38	□□□□□ -2.03
DOT6	YER088C	APA1	P16550	321 aa	Known RBP	2.38	□□□□□ -2.03
DOT6	YER088C	MAK32	P23060	363 aa		2.38	□□□□□ -2.03
DOT6	YER088C	APM3	P38153	483 aa		2.38	□□□□□ -2.03
DOT6	YER088C	IDS2	P46958	469 aa		2.38	□□□□□ -2.03
DOT6	YER088C	YJR008W	P47085	338 aa		2.38	□□□□□ -2.03
DOT6	YER088C	ESF2	P53743	316 aa	Known RBP	2.38	□□□□□ -2.03
DOT6	YER088C	YML122C	Q03207	126 aa		2.38	□□□□□ -2.03
DOT6	YER088C	GFD1	Q04839	188 aa	Known RBP	2.38	□□□□□ -2.03
DOT6	YER088C	THI7	Q05998	598 aa		2.38	□□□□□ -2.03
DOT6	YER088C	CRT10	Q08226	957 aa		2.38	□□□□□ -2.03
DOT6	YER088C	SLK19	Q08581	821 aa	Known RBP	2.38	□□□□□ -2.03
DOT6	YER088C	YLR111W	Q12528	110 aa		2.38	□□□□□ -2.03
DOT6	YER088C	RRP43	P25359	394 aa	Predicted RBP	2.37	□□□□□ -2.03
DOT6	YER088C	RPC34	P32910	317 aa		2.37	□□□□□ -2.03
DOT6	YER088C	UBP16	Q02863	499 aa		2.37	□□□□□ -2.03
DOT6	YER088C	VPS64	Q03944	604 aa		2.37	□□□□□ -2.03
DOT6	YER088C	CRF1	Q04930	467 aa		2.37	□□□□□ -2.03
DOT6	YER088C	SPN1	Q06505	410 aa	Predicted RBP	2.37	□□□□□ -2.03
DOT6	YER088C	IWR1	Q07532	353 aa	Predicted RBP	2.37	□□□□□ -2.03
DOT6	YER088C	CYK3	Q07533	885 aa		2.37	□□□□□ -2.03
DOT6	YER088C	YRF1-2	P40105	1681 aa		2.37	□□□□□ -2.03
DOT6	YER088C	ADE3	P07245	946 aa	Known RBP	2.37	□□□□□ -2.03
DOT6	YER088C	HEM1	P09950	548 aa	Predicted RBP	2.37	□□□□□ -2.03
DOT6	YER088C	POL3	P15436	1097 aa		2.37	□□□□□ -2.03
DOT6	YER088C	SWI4	P25302	1093 aa	Known RBP	2.37	□□□□□ -2.03
DOT6	YER088C	MRPL9	P31334	269 aa		2.37	□□□□□ -2.03
DOT6	YER088C	GEX2	P36173	615 aa		2.37	□□□□□ -2.03
DOT6	YER088C	YBR138C	P38277	524 aa		2.37	□□□□□ -2.03
DOT6	YER088C	BUD16	P39988	312 aa		2.37	□□□□□ -2.03
DOT6	YER088C	MAM1	P40065	302 aa		2.37	□□□□□ -2.03
DOT6	YER088C	OPT1	P40897	799 aa		2.37	□□□□□ -2.03
DOT6	YER088C	IMA1	P53051	589 aa		2.37	□□□□□ -2.03
DOT6	YER088C	TFC6	Q06339	672 aa		2.37	□□□□□ -2.03
DOT6	YER088C	RDL1	Q12305	139 aa	Known RBP	2.37	□□□□□ -2.03
DOT6	YER088C	SUL2	Q12325	893 aa		2.37	□□□□□ -2.03
DOT6	YER088C	PDR11	P40550	1411 aa		2.37	□□□□□ -2.03
DOT6	YER088C	PGK1	P00560	416 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	SES1	P07284	462 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	ERG11	P10614	530 aa		2.36	□□□□□ -2.03
DOT6	YER088C	NCP1	P16603	691 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	APN1	P22936	367 aa		2.36	□□□□□ -2.03
DOT6	YER088C	RIT1	P23796	513 aa		2.36	□□□□□ -2.03
DOT6	YER088C	KES1	P35844	434 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	IES5	P40060	125 aa		2.36	□□□□□ -2.03
DOT6	YER088C	PUG1	P40100	303 aa		2.36	□□□□□ -2.03
DOT6	YER088C	TPM2	P40414	161 aa		2.36	□□□□□ -2.03
DOT6	YER088C	NOP2	P40991	618 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	TAM41	P53230	385 aa		2.36	□□□□□ -2.03
DOT6	YER088C	UBX4	P54730	416 aa		2.36	□□□□□ -2.03
DOT6	YER088C	RAD34	Q06665	692 aa		2.36	□□□□□ -2.03
DOT6	YER088C	NYV1	Q12255	253 aa		2.36	□□□□□ -2.03
DOT6	YER088C	PRS5	Q12265	496 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	AHA1	Q12449	350 aa	Known RBP	2.36	□□□□□ -2.03
DOT6	YER088C	YBR255C-A	Q3E776	120 aa		2.36	□□□□□ -2.03
DOT6	YER088C	YEF3	P16521	1044 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	MDM10	P18409	493 aa		2.35	□□□□□ -2.03
DOT6	YER088C	SEC18	P18759	758 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	SRB8	P25648	1427 aa		2.35	□□□□□ -2.03
DOT6	YER088C	ORC2	P32833	620 aa		2.35	□□□□□ -2.03
DOT6	YER088C	ERC1	P38767	581 aa		2.35	□□□□□ -2.03
DOT6	YER088C	ACA1	P39970	489 aa		2.35	□□□□□ -2.03
DOT6	YER088C	UBP7	P40453	1071 aa		2.35	□□□□□ -2.03
DOT6	YER088C	BNA3	P47039	444 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	RIM13	Q03792	727 aa		2.35	□□□□□ -2.03
DOT6	YER088C	SEG1	Q04279	960 aa		2.35	□□□□□ -2.03
DOT6	YER088C	HIM1	Q06674	414 aa		2.35	□□□□□ -2.03
DOT6	YER088C	YER175W-A	Q8TGU4	54 aa		2.35	□□□□□ -2.03
DOT6	YER088C	PDR5	P33302	1511 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	CTT1	P06115	562 aa		2.35	□□□□□ -2.03
DOT6	YER088C	PGI1	P12709	554 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	IMD2	P38697	523 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	SAP1	P39955	897 aa	Known RBP	2.35	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms