RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	STN1	P38960	494 aa		4.25	□□□□□ -1.73
TPA1	YER049W	NPP2	P39997	493 aa		4.25	□□□□□ -1.73
TPA1	YER049W	TMA108	P40462	946 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SEC27	P41811	889 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	HLJ1	P48353	224 aa		4.25	□□□□□ -1.73
TPA1	YER049W	INP52	P50942	1183 aa		4.25	□□□□□ -1.73
TPA1	YER049W	UBX4	P54730	416 aa		4.25	□□□□□ -1.73
TPA1	YER049W	RPM2	Q02773	1202 aa		4.25	□□□□□ -1.73
TPA1	YER049W	ACL4	Q03771	387 aa		4.25	□□□□□ -1.73
TPA1	YER049W	DUS4	Q06063	367 aa		4.25	□□□□□ -1.73
TPA1	YER049W	YLR053C	Q12026	108 aa		4.25	□□□□□ -1.73
TPA1	YER049W	GET4	Q12125	312 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SPE4	Q12455	300 aa		4.25	□□□□□ -1.73
TPA1	YER049W	NKP1	Q12493	238 aa		4.25	□□□□□ -1.73
TPA1	YER049W	RPL11B	Q3E757	174 aa	Predicted RBP	4.25	□□□□□ -1.73
TPA1	YER049W	AI5_BETA	Q9ZZX0	354 aa		4.25	□□□□□ -1.73
TPA1	YER049W	PMA1	P05030	918 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	SSC1	P0CS90	654 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	CDC24	P11433	854 aa	Predicted RBP	4.24	□□□□□ -1.73
TPA1	YER049W	NAT1	P12945	854 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	YAK1	P14680	807 aa		4.24	□□□□□ -1.73
TPA1	YER049W	MSB1	P21339	1137 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	RRT12	P25381	491 aa		4.24	□□□□□ -1.73
TPA1	YER049W	RPC19	P28000	142 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	PUP2	P32379	260 aa		4.24	□□□□□ -1.73
TPA1	YER049W	SFA1	P32771	386 aa		4.24	□□□□□ -1.73
TPA1	YER049W	PEX2	P32800	271 aa		4.24	□□□□□ -1.73
TPA1	YER049W	SLA2	P33338	968 aa		4.24	□□□□□ -1.73
TPA1	YER049W	SIP2	P34164	415 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	ECM4	P36156	370 aa		4.24	□□□□□ -1.73
TPA1	YER049W	ETR1	P38071	380 aa		4.24	□□□□□ -1.73
TPA1	YER049W	MRX3	P38172	270 aa		4.24	□□□□□ -1.73
TPA1	YER049W	PHO88	P38264	188 aa	Predicted RBP	4.24	□□□□□ -1.73
TPA1	YER049W	YBP1	P38315	674 aa		4.24	□□□□□ -1.73
TPA1	YER049W	ERC1	P38767	581 aa		4.24	□□□□□ -1.73
TPA1	YER049W	MNN1	P39106	762 aa		4.24	□□□□□ -1.73
TPA1	YER049W	MXR1	P40029	184 aa		4.24	□□□□□ -1.73
TPA1	YER049W	YFL054C	P43549	646 aa		4.24	□□□□□ -1.73
TPA1	YER049W	SAD1	P43589	448 aa		4.24	□□□□□ -1.73
TPA1	YER049W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TPA1	YER049W	ALT1	P52893	592 aa		4.24	□□□□□ -1.73
TPA1	YER049W	HOP2	P53187	214 aa		4.24	□□□□□ -1.73
TPA1	YER049W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TPA1	YER049W	KAP95	Q06142	861 aa	Known RBP	4.24	□□□□□ -1.73
TPA1	YER049W	TDA6	Q06466	467 aa		4.24	□□□□□ -1.73
TPA1	YER049W	IWR1	Q07532	353 aa	Predicted RBP	4.24	□□□□□ -1.73
TPA1	YER049W	GUD1	Q07729	489 aa		4.24	□□□□□ -1.73
TPA1	YER049W	GIS3	Q12418	502 aa		4.24	□□□□□ -1.73
TPA1	YER049W	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
TPA1	YER049W	HBN1	Q96VH4	193 aa		4.24	□□□□□ -1.73
TPA1	YER049W	AI3	P03877	415 aa		4.23	□□□□□ -1.73
TPA1	YER049W	THI4	P32318	326 aa		4.23	□□□□□ -1.73
TPA1	YER049W	COT1	P32798	439 aa		4.23	□□□□□ -1.73
TPA1	YER049W	TGL1	P34163	548 aa		4.23	□□□□□ -1.73
TPA1	YER049W	SEG2	P34250	1132 aa		4.23	□□□□□ -1.73
TPA1	YER049W	HES1	P35843	434 aa		4.23	□□□□□ -1.73
TPA1	YER049W	LHS1	P36016	881 aa		4.23	□□□□□ -1.73
TPA1	YER049W	TMN3	P40071	706 aa		4.23	□□□□□ -1.73
TPA1	YER049W	DPH1	P40487	425 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	RLP7	P40693	322 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	DIM1	P41819	318 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	NMA2	P53204	395 aa		4.23	□□□□□ -1.73
TPA1	YER049W	DRN1	P53255	507 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	IST1	P53843	298 aa	Predicted RBP	4.23	□□□□□ -1.73
TPA1	YER049W	PTA1	Q01329	785 aa	Predicted RBP	4.23	□□□□□ -1.73
TPA1	YER049W	EAR1	Q03212	550 aa		4.23	□□□□□ -1.73
TPA1	YER049W	ARO80	Q04052	950 aa		4.23	□□□□□ -1.73
TPA1	YER049W	ADE13	Q05911	482 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	THI7	Q05998	598 aa		4.23	□□□□□ -1.73
TPA1	YER049W	RTP1	Q12751	981 aa		4.23	□□□□□ -1.73
TPA1	YER049W	IMA3	P0CW40	589 aa		4.23	□□□□□ -1.73
TPA1	YER049W	IMA4	P0CW41	589 aa		4.23	□□□□□ -1.73
TPA1	YER049W	RAD18	P10862	487 aa		4.23	□□□□□ -1.73
TPA1	YER049W	TOP3	P13099	656 aa		4.23	□□□□□ -1.73
TPA1	YER049W	COX11	P19516	300 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	NPP1	P25353	742 aa		4.23	□□□□□ -1.73
TPA1	YER049W	AAD3	P25612	363 aa		4.23	□□□□□ -1.73
TPA1	YER049W	URA7	P28274	579 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
TPA1	YER049W	YKL222C	P35995	705 aa		4.23	□□□□□ -1.73
TPA1	YER049W	CUE2	P36075	443 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	KEL1	P38853	1164 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	IAH1	P41734	238 aa		4.23	□□□□□ -1.73
TPA1	YER049W	HSH155	P49955	971 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	MAL11	P53048	616 aa		4.23	□□□□□ -1.73
TPA1	YER049W	BIO4	P53630	237 aa		4.23	□□□□□ -1.73
TPA1	YER049W	SXM1	Q04175	944 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	ATG17	Q06410	417 aa		4.23	□□□□□ -1.73
TPA1	YER049W	CRD1	Q07560	283 aa		4.23	□□□□□ -1.73
TPA1	YER049W	IMA2	Q08295	589 aa		4.23	□□□□□ -1.73
TPA1	YER049W	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	RUP1	Q12242	671 aa		4.23	□□□□□ -1.73
TPA1	YER049W	MDM20	Q12387	796 aa	Known RBP	4.23	□□□□□ -1.73
TPA1	YER049W	LAA1	P39526	2014 aa		4.22	□□□□□ -1.73
TPA1	YER049W	RPS4A	P0CX35	261 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	RPS4B	P0CX36	261 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	MSD1	P15179	658 aa	Known RBP	4.22	□□□□□ -1.73
TPA1	YER049W	CDC20	P26309	610 aa		4.22	□□□□□ -1.73
TPA1	YER049W	CTP1	P38152	299 aa		4.22	□□□□□ -1.73
TPA1	YER049W	STL1	P39932	569 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms