RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C TOP1P04786 769 aa3.63□□□□□ -1.83
VAB2YEL005C ERG11P10614 530 aa3.63□□□□□ -1.83
VAB2YEL005C NCP1P16603 691 aaKnown RBP3.63□□□□□ -1.83
VAB2YEL005C SPO16P17122 198 aa3.63□□□□□ -1.83
VAB2YEL005C KGD2P19262 463 aaPredicted RBP3.63□□□□□ -1.83
VAB2YEL005C AMD2P22580 549 aa3.63□□□□□ -1.83
VAB2YEL005C YBR138CP38277 524 aa3.63□□□□□ -1.83
VAB2YEL005C BST1P43571 1029 aa3.63□□□□□ -1.83
VAB2YEL005C ARC35P53731 342 aaKnown RBP3.63□□□□□ -1.83
VAB2YEL005C YPL191CQ08930 360 aa3.63□□□□□ -1.83
VAB2YEL005C PCL8Q08966 492 aa3.63□□□□□ -1.83
VAB2YEL005C COX17Q12287 69 aa3.63□□□□□ -1.83
VAB2YEL005C SUL2Q12325 893 aa3.63□□□□□ -1.83
VAB2YEL005C MTF2P10849 440 aa3.62□□□□□ -1.83
VAB2YEL005C UBC1P21734 215 aaKnown RBP3.62□□□□□ -1.83
VAB2YEL005C SSH4P32343 579 aa3.62□□□□□ -1.83
VAB2YEL005C BEM3P32873 1128 aa3.62□□□□□ -1.83
VAB2YEL005C EXO84P38261 753 aa3.62□□□□□ -1.83
VAB2YEL005C SAP1P39955 897 aaKnown RBP3.62□□□□□ -1.83
VAB2YEL005C IST3P40565 148 aaPredicted RBP3.62□□□□□ -1.83
VAB2YEL005C TAX4P47030 604 aa3.62□□□□□ -1.83
VAB2YEL005C COG1P53079 417 aa3.62□□□□□ -1.83
VAB2YEL005C YGR079WP53249 370 aa3.62□□□□□ -1.83
VAB2YEL005C ATP23P53722 227 aa3.62□□□□□ -1.83
VAB2YEL005C YPL071CQ02864 156 aa3.62□□□□□ -1.83
VAB2YEL005C RAD33Q04231 177 aa3.62□□□□□ -1.83
VAB2YEL005C ERG27Q12452 347 aaKnown RBP3.62□□□□□ -1.83
VAB2YEL005C LEU2P04173 364 aaPredicted RBP3.61□□□□□ -1.83
VAB2YEL005C BIK1P11709 440 aa3.61□□□□□ -1.83
VAB2YEL005C LAC1P28496 418 aa3.61□□□□□ -1.83
VAB2YEL005C HOT13P36078 116 aa3.61□□□□□ -1.83
VAB2YEL005C IFA38P38286 347 aa3.61□□□□□ -1.83
VAB2YEL005C EXO1P39875 702 aa3.61□□□□□ -1.83
VAB2YEL005C RIC1P40395 1056 aa3.61□□□□□ -1.83
VAB2YEL005C TDA10P42938 290 aa3.61□□□□□ -1.83
VAB2YEL005C ASE1P50275 885 aa3.61□□□□□ -1.83
VAB2YEL005C TAM41P53230 385 aa3.61□□□□□ -1.83
VAB2YEL005C YNL092WP53934 400 aa3.61□□□□□ -1.83
VAB2YEL005C SUB1P54000 292 aaKnown RBP3.61□□□□□ -1.83
VAB2YEL005C YML131WQ03102 365 aa3.61□□□□□ -1.83
VAB2YEL005C YDR109CQ04585 715 aa3.61□□□□□ -1.83
VAB2YEL005C GTB1Q04924 702 aa3.61□□□□□ -1.83
VAB2YEL005C MRI1Q06489 411 aaKnown RBP3.61□□□□□ -1.83
VAB2YEL005C ATG23Q06671 453 aa3.61□□□□□ -1.83
VAB2YEL005C CYK3Q07533 885 aa3.61□□□□□ -1.83
VAB2YEL005C SWT1Q12104 458 aa3.61□□□□□ -1.83
VAB2YEL005C LCB4Q12246 624 aa3.61□□□□□ -1.83
VAB2YEL005C YLR302CO13544 120 aa3.6□□□□□ -1.83
VAB2YEL005C AQY1P0CD91 305 aa3.6□□□□□ -1.83
VAB2YEL005C NUP1P20676 1076 aa3.6□□□□□ -1.83
VAB2YEL005C RRP43P25359 394 aaPredicted RBP3.6□□□□□ -1.83
VAB2YEL005C RER1P25560 188 aa3.6□□□□□ -1.83
VAB2YEL005C LRE1P25579 583 aaKnown RBP3.6□□□□□ -1.83
VAB2YEL005C URK1P27515 501 aa3.6□□□□□ -1.83
VAB2YEL005C VBA2P38358 474 aaKnown RBP3.6□□□□□ -1.83
VAB2YEL005C DJP1P40564 432 aa3.6□□□□□ -1.83
VAB2YEL005C CIA1Q05583 330 aa3.6□□□□□ -1.83
VAB2YEL005C COX1P00401 534 aa3.59□□□□□ -1.83
VAB2YEL005C SUI3P09064 285 aaKnown RBP3.59□□□□□ -1.83
VAB2YEL005C ILS1P09436 1072 aaKnown RBP3.59□□□□□ -1.83
VAB2YEL005C CDC15P27636 974 aa3.59□□□□□ -1.83
VAB2YEL005C MSS51P32335 436 aa3.59□□□□□ -1.83
VAB2YEL005C ERC1P38767 581 aa3.59□□□□□ -1.83
VAB2YEL005C NPA3P47122 385 aa3.59□□□□□ -1.83
VAB2YEL005C CTF18P49956 741 aa3.59□□□□□ -1.83
VAB2YEL005C YAT1P80235 687 aa3.59□□□□□ -1.83
VAB2YEL005C FCP1Q03254 732 aa3.59□□□□□ -1.83
VAB2YEL005C STP3Q05937 343 aa3.59□□□□□ -1.83
VAB2YEL005C TPO3Q06451 622 aa3.59□□□□□ -1.83
VAB2YEL005C VAM6Q07468 1049 aa3.59□□□□□ -1.83
VAB2YEL005C OSW1Q08692 278 aa3.59□□□□□ -1.83
VAB2YEL005C NBP2Q12163 236 aa3.59□□□□□ -1.83
VAB2YEL005C RDL1Q12305 139 aaKnown RBP3.59□□□□□ -1.83
VAB2YEL005C TY2A-LR1P0C2J4 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-FP0CX61 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-GR2P0CX62 438 aa3.58□□□□□ -1.84
VAB2YEL005C URE2P23202 354 aaKnown RBP3.58□□□□□ -1.84
VAB2YEL005C TY2A-CP25383 438 aa3.58□□□□□ -1.84
VAB2YEL005C YUR1P26725 428 aa3.58□□□□□ -1.84
VAB2YEL005C GSY2P27472 705 aa3.58□□□□□ -1.84
VAB2YEL005C TFC3P34111 1160 aa3.58□□□□□ -1.84
VAB2YEL005C PFK26P40433 827 aaKnown RBP3.58□□□□□ -1.84
VAB2YEL005C TY2A-DR2Q03483 438 aa3.58□□□□□ -1.84
VAB2YEL005C HRD3Q05787 833 aa3.58□□□□□ -1.84
VAB2YEL005C VID22Q05934 901 aa3.58□□□□□ -1.84
VAB2YEL005C SSP2Q08646 371 aa3.58□□□□□ -1.84
VAB2YEL005C NEW1Q08972 1196 aaKnown RBP3.58□□□□□ -1.84
VAB2YEL005C TY2A-BQ12260 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-OR2Q12293 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-DR1Q12392 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-OR1Q12439 438 aa3.58□□□□□ -1.84
VAB2YEL005C TY2A-DR3Q99303 438 aa3.58□□□□□ -1.84
VAB2YEL005C RTC1Q08281 1341 aa3.58□□□□□ -1.84
VAB2YEL005C SNF1P06782 633 aaKnown RBP3.57□□□□□ -1.84
VAB2YEL005C PTC6P25646 442 aa3.57□□□□□ -1.84
VAB2YEL005C YJU2P28320 278 aaPredicted RBP3.57□□□□□ -1.84
VAB2YEL005C HES1P35843 434 aa3.57□□□□□ -1.84
VAB2YEL005C KES1P35844 434 aaKnown RBP3.57□□□□□ -1.84
VAB2YEL005C FTH1P38310 465 aa3.57□□□□□ -1.84
VAB2YEL005C ASG1P40467 964 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms