RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CYB2P00175 591 aa3.62□□□□□ -1.83
CDC40YDR364C CTT1P06115 562 aa3.62□□□□□ -1.83
CDC40YDR364C SWI6P09959 803 aa3.62□□□□□ -1.83
CDC40YDR364C LCB1P25045 558 aaKnown RBP3.62□□□□□ -1.83
CDC40YDR364C TGL1P34163 548 aa3.62□□□□□ -1.83
CDC40YDR364C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CDC40YDR364C MUD2P36084 527 aaKnown RBP3.62□□□□□ -1.83
CDC40YDR364C SRP68P38687 599 aaKnown RBP3.62□□□□□ -1.83
CDC40YDR364C SSZ1P38788 538 aaKnown RBP3.62□□□□□ -1.83
CDC40YDR364C YEL068CP39977 110 aa3.62□□□□□ -1.83
CDC40YDR364C PSF2P40359 213 aa3.62□□□□□ -1.83
CDC40YDR364C NDC80P40460 691 aa3.62□□□□□ -1.83
CDC40YDR364C GSM1P42950 618 aa3.62□□□□□ -1.83
CDC40YDR364C YFH7P43591 353 aa3.62□□□□□ -1.83
CDC40YDR364C YJR039WP47107 1121 aa3.62□□□□□ -1.83
CDC40YDR364C ARP5P53946 755 aa3.62□□□□□ -1.83
CDC40YDR364C ARP4P80428 489 aa3.62□□□□□ -1.83
CDC40YDR364C VPS20Q04272 221 aa3.62□□□□□ -1.83
CDC40YDR364C YLR407WQ06070 228 aa3.62□□□□□ -1.83
CDC40YDR364C TGL5Q12043 749 aa3.62□□□□□ -1.83
CDC40YDR364C PGA3Q12746 312 aaKnown RBP3.62□□□□□ -1.83
CDC40YDR364C RPS17AP02407 136 aaKnown RBP3.61□□□□□ -1.83
CDC40YDR364C YEL076C-AP0CX16 216 aa3.61□□□□□ -1.83
CDC40YDR364C YLR464WP0CX17 216 aa3.61□□□□□ -1.83
CDC40YDR364C ADH4P10127 382 aa3.61□□□□□ -1.83
CDC40YDR364C BIK1P11709 440 aa3.61□□□□□ -1.83
CDC40YDR364C RPS17BP14127 136 aaKnown RBP3.61□□□□□ -1.83
CDC40YDR364C AAC3P18238 307 aa3.61□□□□□ -1.83
CDC40YDR364C CBP3P21560 335 aa3.61□□□□□ -1.83
CDC40YDR364C PEP3P27801 918 aa3.61□□□□□ -1.83
CDC40YDR364C ICL1P28240 557 aaPredicted RBP3.61□□□□□ -1.83
CDC40YDR364C SWI3P32591 825 aa3.61□□□□□ -1.83
CDC40YDR364C XRS2P33301 854 aa3.61□□□□□ -1.83
CDC40YDR364C UME6P39001 836 aa3.61□□□□□ -1.83
CDC40YDR364C SPC72P39723 622 aa3.61□□□□□ -1.83
CDC40YDR364C YEL076CP39971 216 aa3.61□□□□□ -1.83
CDC40YDR364C BAP3P41815 604 aa3.61□□□□□ -1.83
CDC40YDR364C MTR3P48240 250 aaPredicted RBP3.61□□□□□ -1.83
CDC40YDR364C SAP4P53036 818 aa3.61□□□□□ -1.83
CDC40YDR364C ORC4P54791 529 aa3.61□□□□□ -1.83
CDC40YDR364C MTD1Q02046 320 aaKnown RBP3.61□□□□□ -1.83
CDC40YDR364C RIM13Q03792 727 aa3.61□□□□□ -1.83
CDC40YDR364C SEG1Q04279 960 aa3.61□□□□□ -1.83
CDC40YDR364C VIP1Q06685 1146 aaKnown RBP3.61□□□□□ -1.83
CDC40YDR364C GRC3Q07845 632 aa3.61□□□□□ -1.83
CDC40YDR364C THI21Q08975 551 aa3.61□□□□□ -1.83
CDC40YDR364C FIG2P25653 1609 aa3.6□□□□□ -1.83
CDC40YDR364C PHO5P00635 467 aa3.6□□□□□ -1.83
CDC40YDR364C SIR3P06701 978 aa3.6□□□□□ -1.83
CDC40YDR364C RPL19AP0CX82 189 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C RPL19BP0CX83 189 aaPredicted RBP3.6□□□□□ -1.83
CDC40YDR364C MATALPHA2P0CY08 210 aa3.6□□□□□ -1.83
CDC40YDR364C HMLALPHA2P0CY09 210 aa3.6□□□□□ -1.83
CDC40YDR364C HOM2P13663 365 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C CDC26P14724 124 aa3.6□□□□□ -1.83
CDC40YDR364C PFK2P16862 959 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
CDC40YDR364C FUR1P18562 216 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C VPS34P22543 875 aa3.6□□□□□ -1.83
CDC40YDR364C CLB4P24871 460 aa3.6□□□□□ -1.83
CDC40YDR364C RPS7AP26786 190 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C MRPL36P36531 177 aa3.6□□□□□ -1.83
CDC40YDR364C UBS1P38290 277 aa3.6□□□□□ -1.83
CDC40YDR364C SAK1P38990 1142 aa3.6□□□□□ -1.83
CDC40YDR364C SWD1P39706 426 aa3.6□□□□□ -1.83
CDC40YDR364C PAC2P39937 518 aa3.6□□□□□ -1.83
CDC40YDR364C PUG1P40100 303 aa3.6□□□□□ -1.83
CDC40YDR364C SSY5P47002 699 aa3.6□□□□□ -1.83
CDC40YDR364C BNA3P47039 444 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C RSC1P53236 928 aa3.6□□□□□ -1.83
CDC40YDR364C RBG2P53295 368 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C ARC35P53731 342 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C BRE5P53741 515 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C CBK1P53894 756 aa3.6□□□□□ -1.83
CDC40YDR364C PRP42Q03776 544 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C MRD1Q06106 887 aaKnown RBP3.6□□□□□ -1.83
CDC40YDR364C RRG1Q12167 365 aaPredicted RBP3.6□□□□□ -1.83
CDC40YDR364C SNF1P06782 633 aaKnown RBP3.59□□□□□ -1.83
CDC40YDR364C MIS1P09440 975 aaKnown RBP3.59□□□□□ -1.83
CDC40YDR364C SNF3P10870 884 aa3.59□□□□□ -1.83
CDC40YDR364C POL3P15436 1097 aa3.59□□□□□ -1.83
CDC40YDR364C COQ1P18900 473 aa3.59□□□□□ -1.83
CDC40YDR364C ROX1P25042 368 aa3.59□□□□□ -1.83
CDC40YDR364C PGS1P25578 521 aa3.59□□□□□ -1.83
CDC40YDR364C IMG2P25642 146 aaPredicted RBP3.59□□□□□ -1.83
CDC40YDR364C MSP1P28737 362 aa3.59□□□□□ -1.83
CDC40YDR364C PAH1P32567 862 aa3.59□□□□□ -1.83
CDC40YDR364C TOA1P32773 286 aa3.59□□□□□ -1.83
CDC40YDR364C PXA2P34230 853 aa3.59□□□□□ -1.83
CDC40YDR364C APN2P38207 520 aa3.59□□□□□ -1.83
CDC40YDR364C CRG1P38892 291 aaRIP-Chip data3.59□□□□□ -1.83not detected
CDC40YDR364C SHC1P39000 512 aa3.59□□□□□ -1.83
CDC40YDR364C PFA3P42836 336 aa3.59□□□□□ -1.83
CDC40YDR364C IRC5P43610 853 aa3.59□□□□□ -1.83
CDC40YDR364C CTF18P49956 741 aa3.59□□□□□ -1.83
CDC40YDR364C HST1P53685 503 aa3.59□□□□□ -1.83
CDC40YDR364C LEE1Q02799 301 aaKnown RBP3.59□□□□□ -1.83
CDC40YDR364C SPN1Q06505 410 aaPredicted RBP3.59□□□□□ -1.83
CDC40YDR364C ISA1Q07821 250 aaPredicted RBP3.59□□□□□ -1.83
CDC40YDR364C SDH5Q08230 162 aa3.59□□□□□ -1.83
CDC40YDR364C TOM1Q03280 3268 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms