RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	TGS1	Q12052	315 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	MRH1	Q12117	320 aa	Predicted RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	UBC1	P21734	215 aa	Known RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	CDC5	P32562	705 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	MTH1	P35198	433 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	NPR3	P38742	1146 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	FSH1	P38777	243 aa	Known RBP	4.72	□□□□□ -1.65
TRM1	YDR120C	PSF2	P40359	213 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	TFC6	Q06339	672 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	YDL073W	Q07454	984 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	SSP2	Q08646	371 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	SSM4	P40318	1319 aa		4.72	□□□□□ -1.65
TRM1	YDR120C	CDC43	P18898	376 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	DMC1	P25453	334 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	SSH4	P32343	579 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	PIH1	P38768	344 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	BST1	P43571	1029 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	SAP4	P53036	818 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	SUL2	Q12325	893 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	MDM20	Q12387	796 aa	Known RBP	4.71	□□□□□ -1.66
TRM1	YDR120C	NKP1	Q12493	238 aa		4.71	□□□□□ -1.66
TRM1	YDR120C	BNA1	P47096	177 aa		4.7	□□□□□ -1.66
TRM1	YDR120C	CRF1	Q04930	467 aa		4.7	□□□□□ -1.66
TRM1	YDR120C	MRPL36	P36531	177 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	IFA38	P38286	347 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	VID27	P40157	782 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	YPL108W	Q02872	168 aa	Predicted RBP	4.69	□□□□□ -1.66
TRM1	YDR120C	ZPS1	Q12512	249 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	AAC1	P04710	309 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	PET122	P10355	254 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	YPK1	P12688	680 aa	Known RBP	4.69	□□□□□ -1.66
TRM1	YDR120C	RAD26	P40352	1085 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	CTF18	P49956	741 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	VPS73	P53142	486 aa	Known RBP	4.69	□□□□□ -1.66
TRM1	YDR120C	COQ6	P53318	479 aa		4.69	□□□□□ -1.66
TRM1	YDR120C	CSR1	Q06705	408 aa	Known RBP	4.69	□□□□□ -1.66
TRM1	YDR120C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
TRM1	YDR120C	TPK2	P06245	380 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	SNF1	P06782	633 aa	Known RBP	4.68	□□□□□ -1.66
TRM1	YDR120C	WHI2	P12611	486 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	EMP70	P32802	667 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	MUP3	P38734	546 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	RRT6	P53117	311 aa	Predicted RBP	4.68	□□□□□ -1.66
TRM1	YDR120C	YGL117W	P53133	265 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	YNL092W	P53934	400 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	IRC10	Q08118	586 aa		4.68	□□□□□ -1.66
TRM1	YDR120C	PDR5	P33302	1511 aa	Known RBP	4.67	□□□□□ -1.66
TRM1	YDR120C	CPA2	P03965	1118 aa	Known RBP	4.67	□□□□□ -1.66
TRM1	YDR120C	ARO9	P38840	513 aa	Predicted RBP	4.67	□□□□□ -1.66
TRM1	YDR120C	ASN1	P49089	572 aa	Known RBP	4.67	□□□□□ -1.66
TRM1	YDR120C	TAM41	P53230	385 aa		4.67	□□□□□ -1.66
TRM1	YDR120C	CPR8	P53728	308 aa		4.67	□□□□□ -1.66
TRM1	YDR120C	VID22	Q05934	901 aa		4.67	□□□□□ -1.66
TRM1	YDR120C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
TRM1	YDR120C	YER175W-A	Q8TGU4	54 aa		4.67	□□□□□ -1.66
TRM1	YDR120C	RNR3	P21672	869 aa	Known RBP	4.66	□□□□□ -1.66
TRM1	YDR120C	RRN3	P36070	627 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	TRM8	Q12009	286 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	STE12	P13574	688 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	AMD2	P22580	549 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	SWC3	P31376	625 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	SLC1	P33333	303 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	TDP1	P38319	544 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	LNP1	P38878	278 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	KAP123	P40069	1113 aa	Known RBP	4.66	□□□□□ -1.66
TRM1	YDR120C	VAM6	Q07468	1049 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	CRT10	Q08226	957 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	NEW1	Q08972	1196 aa	Known RBP	4.66	□□□□□ -1.66
TRM1	YDR120C	YBR255C-A	Q3E776	120 aa		4.66	□□□□□ -1.66
TRM1	YDR120C	LEU2	P04173	364 aa	Predicted RBP	4.65	□□□□□ -1.67
TRM1	YDR120C	KGD2	P19262	463 aa	Predicted RBP	4.65	□□□□□ -1.67
TRM1	YDR120C	RER1	P25560	188 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	MCM10	P32354	571 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	ZAP1	P47043	880 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	PSP1	P50896	841 aa	Known RBP	4.65	□□□□□ -1.67
TRM1	YDR120C	YML119W	Q03208	357 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	GFD1	Q04839	188 aa	Known RBP	4.65	□□□□□ -1.67
TRM1	YDR120C	OPY2	Q06810	360 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	COX17	Q12287	69 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	PCD1	Q12524	340 aa		4.65	□□□□□ -1.67
TRM1	YDR120C	PNO1	Q99216	274 aa	Known RBP	4.65	□□□□□ -1.67
TRM1	YDR120C	URK1	P27515	501 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	RAD16	P31244	790 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	RPT3	P33298	428 aa	Known RBP	4.64	□□□□□ -1.67
TRM1	YDR120C	AXL2	P38928	823 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
TRM1	YDR120C	VPS8	P39702	1274 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	MAM1	P40065	302 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	VPS72	Q03388	795 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	YDL242W	Q07746	117 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	SUT2	Q12286	268 aa		4.64	□□□□□ -1.67
TRM1	YDR120C	CHO2	P05374	869 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	TPK1	P06244	397 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	GUK1	P15454	187 aa	Known RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	PDE1	P22434	369 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	GCD7	P32502	381 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM1	YDR120C	UME6	P39001	836 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	BUD16	P39988	312 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	YEL020C	P39994	560 aa		4.63	□□□□□ -1.67
TRM1	YDR120C	SKP2	P42843	763 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms