RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDC2	YDR081C	ARE2	P53629	642 aa	Known RBP	3.15	□□□□□ -1.91
PDC2	YDR081C	TEX1	P53851	422 aa	Known RBP	3.15	□□□□□ -1.91
PDC2	YDR081C	SSL2	Q00578	843 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	RRN5	Q02983	363 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	MFB1	Q04922	465 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	YLR345W	Q06137	509 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	YPR027C	Q12079	277 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	TRM13	Q12383	476 aa		3.15	□□□□□ -1.91
PDC2	YDR081C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
PDC2	YDR081C	ARO1	P08566	1588 aa	Known RBP	3.15	□□□□□ -1.91
PDC2	YDR081C	SRB8	P25648	1427 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	TRM732	Q03496	1420 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	MET17	P06106	444 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	CDC16	P09798	840 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	HOM2	P13663	365 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	CAD1	P24813	409 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	LCB1	P25045	558 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	RRP7	P25368	297 aa	Predicted RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PDC2	YDR081C	NTG1	P31378	399 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	YPT7	P32939	208 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	XRS2	P33301	854 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	MIC60	P36112	540 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	LAS1	P36146	502 aa	Predicted RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	APN2	P38207	520 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	YBR259W	P38338	688 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	RFC1	P38630	861 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	NPR2	P39923	615 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	VID28	P40547	921 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	CCT7	P42943	550 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PDC2	YDR081C	CBK1	P53894	756 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	GPD1	Q00055	391 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	BMS1	Q08965	1183 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	SFI1	Q12369	946 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	RVB2	Q12464	471 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	CTT1	P06115	562 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	STE50	P25344	346 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	GPI10	P30777	616 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	DCG1	P32460	244 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	PEX18	P38855	283 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	SPT8	P38915	602 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	ECM1	P39715	212 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	UBP7	P40453	1071 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	NRG1	Q03125	231 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	STP4	Q07351	490 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	ENB1	Q08299	606 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	ARP7	Q12406	477 aa		3.14	□□□□□ -1.91
PDC2	YDR081C	HRP1	Q99383	534 aa	Known RBP	3.14	□□□□□ -1.91
PDC2	YDR081C	RPS17A	P02407	136 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	PYC1	P11154	1178 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	RPS17B	P14127	136 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	GUK1	P15454	187 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	PRP28	P23394	588 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	STE11	P23561	717 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	NIP1	P32497	812 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	SSE1	P32589	693 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	VPS17	P32913	551 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	UIP5	P36137	443 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	PPE1	P38796	400 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	DUN1	P39009	513 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	LCB2	P40970	561 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	FKH2	P41813	862 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	EPL1	P43572	832 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	AIP1	P46680	615 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	ASK10	P48361	1146 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	MCM6	P53091	1017 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	LSB1	P53281	241 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	ARC35	P53731	342 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	REX2	P54964	269 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	CIK1	Q01649	594 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	RMT2	Q03305	412 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	MCM21	Q06675	368 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	VPS36	Q06696	566 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	HOP1	P20050	605 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	RNR1	P21524	888 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	GND1	P38720	489 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	LYS9	P38999	446 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	STL1	P39932	569 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	GET2	P40056	285 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	YBP2	P53169	641 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	MRPL13	Q02204	264 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	ADA2	Q02336	434 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	YPL107W	Q02873	248 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	FCP1	Q03254	732 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	VHS3	Q08438	674 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	TRM8	Q12009	286 aa		3.13	□□□□□ -1.91
PDC2	YDR081C	PDH1	Q12428	516 aa	Known RBP	3.13	□□□□□ -1.91
PDC2	YDR081C	YLR358C	O13565	187 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	CPA2	P03965	1118 aa	Known RBP	3.12	□□□□□ -1.91
PDC2	YDR081C	LEU2	P04173	364 aa	Predicted RBP	3.12	□□□□□ -1.91
PDC2	YDR081C	NUC1	P08466	329 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	ROX1	P25042	368 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	NGG1	P32494	702 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	MRE11	P32829	692 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	YKR075C	P36155	307 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	YBL028C	P38202	106 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	SMC2	P38989	1170 aa	Known RBP	3.12	□□□□□ -1.91
PDC2	YDR081C	BUD16	P39988	312 aa		3.12	□□□□□ -1.91
PDC2	YDR081C	IRC24	P40580	263 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms