RNA–Protein interactions for RNA: YDL051W

LHP1, RNA binding protein required for maturation of tRNA and U6 snRNA, yeast

Gene LHP1, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LHP1	YDL051W	VTC4	P47075	721 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	YJL007C	P47080	104 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	YGL039W	P53183	348 aa	Known RBP	4.82	□□□□□ -1.64
LHP1	YDL051W	NOP19	P53317	196 aa	Predicted RBP	4.82	□□□□□ -1.64
LHP1	YDL051W	YPR003C	P53394	754 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	DCP2	P53550	970 aa	Known RBP	4.82	□□□□□ -1.64
LHP1	YDL051W	OSH6	Q02201	448 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	MZM1	Q03429	123 aa	Predicted RBP	4.82	□□□□□ -1.64
LHP1	YDL051W	BUD22	Q04347	519 aa	Known RBP	4.82	□□□□□ -1.64
LHP1	YDL051W	GMC2	Q06201	188 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	SEC10	Q06245	871 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	NSE1	Q07913	336 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	NRT1	Q08485	598 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	MUM3	Q08750	479 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	MCH5	Q08777	521 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	LDB17	Q12342	491 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	AI5_ALPHA	Q9ZZX1	630 aa		4.82	□□□□□ -1.64
LHP1	YDL051W	PMD1	P32634	1753 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	FBP1	P09201	348 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	WHI2	P12611	486 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
LHP1	YDL051W	FBA1	P14540	359 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	VPS3	P23643	1011 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	VBA3	P25594	458 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	MSH2	P25847	964 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	PRR1	P28708	518 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	GCD11	P32481	527 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	NGG1	P32494	702 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	KAR9	P32526	644 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	DOM34	P33309	386 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	VBA5	P36172	582 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	MAK5	P38112	773 aa	Predicted RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	CTP1	P38152	299 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	YHL012W	P38709	493 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	SSZ1	P38788	538 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	SEC31	P38968	1273 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	MEF2	P39677	819 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	THO1	P40040	218 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	RPT2	P40327	437 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	MET18	P40469	1032 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	SNL1	P40548	159 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	GLG2	P47011	380 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	TAH11	P47112	604 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	ISM1	P48526	1002 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	PEX21	P50091	288 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	GET1	P53192	235 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	PEX31	P53203	462 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	YGR283C	P53336	341 aa	Predicted RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	COP1	P53622	1201 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	ARC35	P53731	342 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	FPK1	P53739	893 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	ESF2	P53743	316 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	YNL010W	P53981	241 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	ORC3	P54790	616 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	CIK1	Q01649	594 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	SVL3	Q03088	825 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	DYN3	Q04949	312 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	RSC2	Q06488	889 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	AAD4	Q07747	329 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	MSC6	Q08818	692 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	SLP1	Q12232	587 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	DBP10	Q12389	995 aa	Known RBP	4.81	□□□□□ -1.64
LHP1	YDL051W	CSR2	Q12734	1121 aa		4.81	□□□□□ -1.64
LHP1	YDL051W	TEF1	P02994	458 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	REP1	P03871	373 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	CBP2	P03874	630 aa	Predicted RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	HEM2	P05373	342 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	RHO2	P06781	192 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	BCY1	P07278	416 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	MSS18	P08593	268 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	ERR1	P0CX10	437 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	ERR2	P0CX11	437 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	ERG6	P25087	383 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	RVS161	P25343	265 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	CDC20	P26309	610 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	TIM23	P32897	222 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	RPT5	P33297	434 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	SIP2	P34164	415 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	SHP1	P34223	423 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	MDJ1	P35191	511 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	APN2	P38207	520 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	BIT2	P38346	545 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	SRP68	P38687	599 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	ARN1	P38731	627 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	YHR054C	P38780	354 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	RSC30	P38781	883 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	YHR182W	P38870	785 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	AIM18	P38884	321 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	PCF11	P39081	626 aa	Predicted RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	ERR3	P42222	437 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	NET1	P47035	1189 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	PUS2	P53167	370 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	YGR127W	P53275	312 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	UTP8	P53276	713 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	GPI1	P53306	609 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	PRO2	P54885	456 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	REX2	P54964	269 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	KIN4	Q01919	800 aa		4.8	□□□□□ -1.64
LHP1	YDL051W	ELP3	Q02908	557 aa	Known RBP	4.8	□□□□□ -1.64
LHP1	YDL051W	YMR209C	Q03648	457 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms