RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeastyeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR2YDL042C PCL8Q08966 492 aa6.39□□□□□ -1.39
SIR2YDL042C ULA1Q12059 462 aa6.39□□□□□ -1.39
SIR2YDL042C RPL7BQ12213 244 aaKnown RBP6.39□□□□□ -1.39
SIR2YDL042C RVB2Q12464 471 aaKnown RBP6.39□□□□□ -1.39
SIR2YDL042C LEU2P04173 364 aaPredicted RBP6.39□□□□□ -1.39
SIR2YDL042C AAD3P25612 363 aa6.39□□□□□ -1.39
SIR2YDL042C URK1P27515 501 aa6.39□□□□□ -1.39
SIR2YDL042C YMC1P32331 307 aa6.39□□□□□ -1.39
SIR2YDL042C RPT3P33298 428 aaKnown RBP6.39□□□□□ -1.39
SIR2YDL042C TEF4P36008 412 aaKnown RBP6.39□□□□□ -1.39
SIR2YDL042C VPS8P39702 1274 aa6.39□□□□□ -1.39
SIR2YDL042C VAM6Q07468 1049 aa6.39□□□□□ -1.39
SIR2YDL042C NEW1Q08972 1196 aaKnown RBP6.39□□□□□ -1.39
SIR2YDL042C SIP1P32578 815 aa6.38□□□□□ -1.39
SIR2YDL042C PAC2P39937 518 aa6.38□□□□□ -1.39
SIR2YDL042C COG1P53079 417 aa6.38□□□□□ -1.39
SIR2YDL042C COG2P53271 262 aa6.38□□□□□ -1.39
SIR2YDL042C AHA1Q12449 350 aaKnown RBP6.38□□□□□ -1.39
SIR2YDL042C PCD1Q12524 340 aa6.38□□□□□ -1.39
SIR2YDL042C ATP2P00830 511 aaKnown RBP6.37□□□□□ -1.39
SIR2YDL042C ADE5,7P07244 802 aaKnown RBP6.37□□□□□ -1.39
SIR2YDL042C IMO32P53219 342 aa6.37□□□□□ -1.39
SIR2YDL042C RAD33Q04231 177 aa6.37□□□□□ -1.39
SIR2YDL042C YMR018WQ04364 514 aa6.37□□□□□ -1.39
SIR2YDL042C STP3Q05937 343 aa6.37□□□□□ -1.39
SIR2YDL042C OPT1P40897 799 aa6.36□□□□□ -1.39
SIR2YDL042C PSP1P50896 841 aaKnown RBP6.36□□□□□ -1.39
SIR2YDL042C YML053CQ04978 212 aa6.36□□□□□ -1.39
SIR2YDL042C OPY2Q06810 360 aa6.36□□□□□ -1.39
SIR2YDL042C LCB4Q12246 624 aa6.36□□□□□ -1.39
SIR2YDL042C YMR084WA2P2R3 262 aa6.36□□□□□ -1.39
SIR2YDL042C GUK1P15454 187 aaKnown RBP6.36□□□□□ -1.39
SIR2YDL042C ADY2P25613 283 aa6.36□□□□□ -1.39
SIR2YDL042C MCM10P32354 571 aa6.36□□□□□ -1.39
SIR2YDL042C CNS1P33313 385 aa6.36□□□□□ -1.39
SIR2YDL042C RPF2P36160 344 aaKnown RBP6.36□□□□□ -1.39
SIR2YDL042C BUD16P39988 312 aa6.36□□□□□ -1.39
SIR2YDL042C YER010CP40011 234 aa6.36□□□□□ -1.39
SIR2YDL042C GTB1Q04924 702 aa6.36□□□□□ -1.39
SIR2YDL042C TY2B-LR1P0C2J3 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-FP0CX63 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-GR2P0CX64 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-CP25384 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-DR2Q03494 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY1B-DR1Q03855 1755 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-DR3Q07791 1770 aaKnown RBP6.35□□□□□ -1.39
SIR2YDL042C TY2B-OR1Q12113 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-DR1Q12472 1770 aa6.35□□□□□ -1.39
SIR2YDL042C TY2B-OR2Q12501 1770 aa6.35□□□□□ -1.39
SIR2YDL042C SEC3P33332 1336 aaKnown RBP6.35□□□□□ -1.39
SIR2YDL042C AXL2P38928 823 aa6.35□□□□□ -1.39
SIR2YDL042C EXO1P39875 702 aa6.35□□□□□ -1.39
SIR2YDL042C CSL4P53859 292 aaPredicted RBP6.35□□□□□ -1.39
SIR2YDL042C PLM2Q04383 521 aa6.35□□□□□ -1.39
SIR2YDL042C MRI1Q06489 411 aaKnown RBP6.35□□□□□ -1.39
SIR2YDL042C TY2A-LR1P0C2J4 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-FP0CX61 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-GR2P0CX62 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-CP25383 438 aa6.34□□□□□ -1.39
SIR2YDL042C FUN12P39730 1002 aaKnown RBP6.34□□□□□ -1.39
SIR2YDL042C IST3P40565 148 aaPredicted RBP6.34□□□□□ -1.39
SIR2YDL042C TDA10P42938 290 aa6.34□□□□□ -1.39
SIR2YDL042C YGR079WP53249 370 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-DR2Q03483 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-BQ12260 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-OR2Q12293 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-DR1Q12392 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-OR1Q12439 438 aa6.34□□□□□ -1.39
SIR2YDL042C TY2A-DR3Q99303 438 aa6.34□□□□□ -1.39
SIR2YDL042C Q0010Q9ZZX9 128 aa6.34□□□□□ -1.39
SIR2YDL042C CHD1P32657 1468 aa6.34□□□□□ -1.4
SIR2YDL042C TOP2P06786 1428 aaKnown RBP6.33□□□□□ -1.4
SIR2YDL042C HEM1P09950 548 aaPredicted RBP6.33□□□□□ -1.4
SIR2YDL042C PPZ2P33329 710 aa6.33□□□□□ -1.4
SIR2YDL042C YIL161WP40449 235 aaKnown RBP6.33□□□□□ -1.4
SIR2YDL042C NPA3P47122 385 aa6.33□□□□□ -1.4
SIR2YDL042C AAT1Q01802 451 aa6.33□□□□□ -1.4
SIR2YDL042C FMP30Q02883 468 aa6.33□□□□□ -1.4
SIR2YDL042C VPS72Q03388 795 aa6.33□□□□□ -1.4
SIR2YDL042C ATG23Q06671 453 aa6.33□□□□□ -1.4
SIR2YDL042C PRS5Q12265 496 aaKnown RBP6.33□□□□□ -1.4
SIR2YDL042C SPO16P17122 198 aa6.33□□□□□ -1.4
SIR2YDL042C RRP43P25359 394 aaPredicted RBP6.33□□□□□ -1.4
SIR2YDL042C NAB3P38996 802 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SIR2YDL042C SAP1P39955 897 aaKnown RBP6.33□□□□□ -1.4
SIR2YDL042C RIC1P40395 1056 aa6.33□□□□□ -1.4
SIR2YDL042C MEP3P53390 489 aa6.33□□□□□ -1.4
SIR2YDL042C SLK19Q08581 821 aaKnown RBP6.33□□□□□ -1.4
SIR2YDL042C YPL191CQ08930 360 aa6.33□□□□□ -1.4
SIR2YDL042C SWT1Q12104 458 aa6.33□□□□□ -1.4
SIR2YDL042C POL1P13382 1468 aa6.32□□□□□ -1.4
SIR2YDL042C CDC25P04821 1589 aa6.32□□□□□ -1.4
SIR2YDL042C COX1P00401 534 aa6.32□□□□□ -1.4
SIR2YDL042C LRE1P25579 583 aaKnown RBP6.32□□□□□ -1.4
SIR2YDL042C YJU2P28320 278 aaPredicted RBP6.32□□□□□ -1.4
SIR2YDL042C RPC34P32910 317 aa6.32□□□□□ -1.4
SIR2YDL042C ERC1P38767 581 aa6.32□□□□□ -1.4
SIR2YDL042C ASE1P50275 885 aa6.32□□□□□ -1.4
SIR2YDL042C CBK1P53894 756 aa6.32□□□□□ -1.4
SIR2YDL042C HRD3Q05787 833 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 104 ms