RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C TDP1P38319 544 aa3.63□□□□□ -1.83
SHG1YBR258C YEL020CP39994 560 aa3.63□□□□□ -1.83
SHG1YBR258C IES5P40060 125 aa3.63□□□□□ -1.83
SHG1YBR258C RAD26P40352 1085 aa3.63□□□□□ -1.83
SHG1YBR258C YIL166CP40445 542 aa3.63□□□□□ -1.83
SHG1YBR258C SAP4P53036 818 aa3.63□□□□□ -1.83
SHG1YBR258C COS12P53053 380 aa3.63□□□□□ -1.83
SHG1YBR258C YGL117WP53133 265 aa3.63□□□□□ -1.83
SHG1YBR258C SPC98P53540 846 aa3.63□□□□□ -1.83
SHG1YBR258C CPR6P53691 371 aaKnown RBP3.63□□□□□ -1.83
SHG1YBR258C YDL073WQ07454 984 aa3.63□□□□□ -1.83
SHG1YBR258C YPL216WQ08964 1102 aa3.63□□□□□ -1.83
SHG1YBR258C PCK1P10963 549 aa3.62□□□□□ -1.83
SHG1YBR258C ILV6P25605 309 aaKnown RBP3.62□□□□□ -1.83
SHG1YBR258C ADY2P25613 283 aa3.62□□□□□ -1.83
SHG1YBR258C PWP2P25635 923 aaKnown RBP3.62□□□□□ -1.83
SHG1YBR258C YCR061WP25639 631 aa3.62□□□□□ -1.83
SHG1YBR258C CDC5P32562 705 aa3.62□□□□□ -1.83
SHG1YBR258C SDH8P38345 138 aa3.62□□□□□ -1.83
SHG1YBR258C PIH1P38768 344 aa3.62□□□□□ -1.83
SHG1YBR258C SPC72P39723 622 aa3.62□□□□□ -1.83
SHG1YBR258C PAC2P39937 518 aa3.62□□□□□ -1.83
SHG1YBR258C HOF1Q05080 669 aa3.62□□□□□ -1.83
SHG1YBR258C TGS1Q12052 315 aa3.62□□□□□ -1.83
SHG1YBR258C MDM20Q12387 796 aaKnown RBP3.62□□□□□ -1.83
SHG1YBR258C AHC1Q12433 566 aa3.62□□□□□ -1.83
SHG1YBR258C ZPS1Q12512 249 aa3.62□□□□□ -1.83
SHG1YBR258C SEN1Q00416 2231 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C CPA2P03965 1118 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C WHI2P12611 486 aa3.61□□□□□ -1.83
SHG1YBR258C MCM3P24279 971 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C APM3P38153 483 aa3.61□□□□□ -1.83
SHG1YBR258C PFF1P38244 976 aa3.61□□□□□ -1.83
SHG1YBR258C ACA1P39970 489 aa3.61□□□□□ -1.83
SHG1YBR258C VFA1P40080 203 aa3.61□□□□□ -1.83
SHG1YBR258C ASN1P49089 572 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C IMA1P53051 589 aa3.61□□□□□ -1.83
SHG1YBR258C COQ6P53318 479 aa3.61□□□□□ -1.83
SHG1YBR258C YNL092WP53934 400 aa3.61□□□□□ -1.83
SHG1YBR258C ADE16P54113 591 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C MOT3P54785 490 aaKnown RBP3.61□□□□□ -1.83
SHG1YBR258C APM1Q00776 475 aaPredicted RBP3.61□□□□□ -1.83
SHG1YBR258C TRS23Q03784 219 aa3.61□□□□□ -1.83
SHG1YBR258C AAC1P04710 309 aa3.6□□□□□ -1.83
SHG1YBR258C RPL7AP05737 244 aaKnown RBP3.6□□□□□ -1.83
SHG1YBR258C KGD2P19262 463 aaPredicted RBP3.6□□□□□ -1.83
SHG1YBR258C PMA2P19657 947 aa3.6□□□□□ -1.83
SHG1YBR258C BET2P20133 325 aa3.6□□□□□ -1.83
SHG1YBR258C MSM1P22438 575 aa3.6□□□□□ -1.83
SHG1YBR258C RPT2P40327 437 aaKnown RBP3.6□□□□□ -1.83
SHG1YBR258C ACS1Q01574 713 aa3.6□□□□□ -1.83
SHG1YBR258C VPS64Q03944 604 aa3.6□□□□□ -1.83
SHG1YBR258C ARG7Q04728 441 aa3.6□□□□□ -1.83
SHG1YBR258C CIA1Q05583 330 aa3.6□□□□□ -1.83
SHG1YBR258C IWR1Q07532 353 aaPredicted RBP3.6□□□□□ -1.83
SHG1YBR258C AIM6Q07716 390 aa3.6□□□□□ -1.83
SHG1YBR258C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SHG1YBR258C RPL7BQ12213 244 aaKnown RBP3.6□□□□□ -1.83
SHG1YBR258C ADE6P38972 1358 aaKnown RBP3.6□□□□□ -1.83
SHG1YBR258C HIP1P06775 603 aa3.59□□□□□ -1.83
SHG1YBR258C PHO81P17442 1178 aa3.59□□□□□ -1.83
SHG1YBR258C SAT4P25333 603 aaKnown RBP3.59□□□□□ -1.83
SHG1YBR258C PRE2P30656 287 aaKnown RBP3.59□□□□□ -1.83
SHG1YBR258C STB5P38699 743 aa3.59□□□□□ -1.83
SHG1YBR258C PMC1P38929 1173 aaPredicted RBP3.59□□□□□ -1.83
SHG1YBR258C IDS2P46958 469 aa3.59□□□□□ -1.83
SHG1YBR258C GIS1Q03833 894 aa3.59□□□□□ -1.83
SHG1YBR258C VMS1Q04311 632 aaKnown RBP3.59□□□□□ -1.83
SHG1YBR258C CRT10Q08226 957 aa3.59□□□□□ -1.83
SHG1YBR258C RPO41P13433 1351 aaKnown RBP3.59□□□□□ -1.83
SHG1YBR258C YLR419WQ06698 1435 aaKnown RBP3.59□□□□□ -1.84
SHG1YBR258C APA1P16550 321 aaKnown RBP3.58□□□□□ -1.84
SHG1YBR258C YCL049CP25577 312 aa3.58□□□□□ -1.84
SHG1YBR258C MSH1P25846 959 aa3.58□□□□□ -1.84
SHG1YBR258C RPS7AP26786 190 aaKnown RBP3.58□□□□□ -1.84
SHG1YBR258C UGP1P32861 499 aaKnown RBP3.58□□□□□ -1.84
SHG1YBR258C PTH2P34222 208 aa3.58□□□□□ -1.84
SHG1YBR258C FUI1P38196 639 aa3.58□□□□□ -1.84
SHG1YBR258C VPS27P40343 622 aaKnown RBP3.58□□□□□ -1.84
SHG1YBR258C TRM44Q02648 567 aaKnown RBP3.58□□□□□ -1.84
SHG1YBR258C ARO10Q06408 635 aa3.58□□□□□ -1.84
SHG1YBR258C PSR2Q07949 397 aa3.58□□□□□ -1.84
SHG1YBR258C ULA1Q12059 462 aa3.58□□□□□ -1.84
SHG1YBR258C TAD3Q9URQ3 322 aa3.58□□□□□ -1.84
SHG1YBR258C CHO2P05374 869 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C MIS1P09440 975 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C MTF2P10849 440 aa3.57□□□□□ -1.84
SHG1YBR258C STE12P13574 688 aa3.57□□□□□ -1.84
SHG1YBR258C POL3P15436 1097 aa3.57□□□□□ -1.84
SHG1YBR258C RNR3P21672 869 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C SPO11P23179 398 aa3.57□□□□□ -1.84
SHG1YBR258C RIT1P23796 513 aa3.57□□□□□ -1.84
SHG1YBR258C YMC1P32331 307 aa3.57□□□□□ -1.84
SHG1YBR258C ARB1P40024 610 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C TDA10P42938 290 aa3.57□□□□□ -1.84
SHG1YBR258C VPS4P52917 437 aa3.57□□□□□ -1.84
SHG1YBR258C YGR117CP53270 476 aa3.57□□□□□ -1.84
SHG1YBR258C ARC35P53731 342 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C ESF2P53743 316 aaKnown RBP3.57□□□□□ -1.84
SHG1YBR258C ATG16Q03818 150 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 84.6 ms