RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 PTPRTO14522 1441 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 HOXA10P31260 410 aaPredicted RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 IRAK1P51617 712 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 ALKBH8Q96BT7 664 aaKnown RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 SLC26A8Q96RN1 970 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 CSRNP1Q96S65 589 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
SVIP-202ENST00000525670 ABCB6Q9NP58 842 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
SVIP-202ENST00000525670 ZFYVE9O95405 1425 aa7.52□□□□□ -1.2
SVIP-202ENST00000525670 NEXMIFQ5QGS0 1516 aa7.52□□□□□ -1.2
SVIP-202ENST00000525670 LTBP4Q8N2S1 1624 aa7.52□□□□□ -1.2
SVIP-202ENST00000525670 PPLO60437 1756 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 ECEL1O95672 775 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 FOSL1P15407 271 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 AP3B2Q13367 1082 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 MAP7Q14244 749 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 DYMQ7RTS9 669 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 ZAR1Q86SH2 424 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 SHISA5Q8N114 240 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 SLC52A1Q9NWF4 448 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 TRAK1Q9UPV9 953 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 EID1Q9Y6B2 187 aa7.52□□□□□ -1.21
SVIP-202ENST00000525670 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.51□□□□□ -1.21
SVIP-202ENST00000525670 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 NFICP08651 508 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 ADMP35318 185 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
SVIP-202ENST00000525670 TBC1D32Q96NH3 1257 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 PCGF6Q9BYE7 350 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 GSX1Q9H4S2 264 aaPredicted RBP7.51□□□□□ -1.21
SVIP-202ENST00000525670 NRXN3Q9Y4C0 1643 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 SYNGAP1Q96PV0 1343 aa7.51□□□□□ -1.21
SVIP-202ENST00000525670 MED14O60244 1454 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 IFT172Q9UG01 1749 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 AOC2O75106 756 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 GRM2Q14416 872 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 GLIS3Q8NEA6 775 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
SVIP-202ENST00000525670 ACSS3Q9H6R3 686 aa7.5□□□□□ -1.21
SVIP-202ENST00000525670 ASPAP45381 313 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 MSMPQ1L6U9 139 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 GATA6Q92908 595 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 FAM105AQ9NUU6 356 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
SVIP-202ENST00000525670 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
SVIP-202ENST00000525670 XIRP1Q702N8 1843 aaKnown RBP7.48□□□□□ -1.21
SVIP-202ENST00000525670 CYP26A1O43174 497 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 PAX4O43316 350 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
SVIP-202ENST00000525670 RAB6AP20340 208 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 DUSP27Q5VZP5 1158 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
SVIP-202ENST00000525670 PLEKHG1Q9ULL1 1385 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 SETD1AO15047 1707 aaKnown RBP7.47□□□□□ -1.21
SVIP-202ENST00000525670 ADAMTS13Q76LX8 1427 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 FAM170BA6NMN3 283 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 BRD1O95696 1058 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 PRNPP04156 253 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 CYP27A1Q02318 531 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 FAAP100Q0VG06 881 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 PPP1R9AQ9ULJ8 1098 aa7.47□□□□□ -1.21
SVIP-202ENST00000525670 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.21
SVIP-202ENST00000525670 NWD1Q149M9 1564 aa7.46□□□□□ -1.21
SVIP-202ENST00000525670 SPATA31E1Q6ZUB1 1445 aa7.46□□□□□ -1.21
SVIP-202ENST00000525670 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
SVIP-202ENST00000525670 SEZ6L2Q6UXD5 910 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 BIN2Q9UBW5 565 aaPredicted RBP7.46□□□□□ -1.22
SVIP-202ENST00000525670 CCDC39Q9UFE4 941 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 ANGEL1Q9UNK9 670 aaKnown RBP7.46□□□□□ -1.22
SVIP-202ENST00000525670 CPS1P31327 1500 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 ASXL1Q8IXJ9 1541 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 LRRC7Q96NW7 1537 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 ADGRF5Q8IZF2 1346 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 DIP2AQ14689 1571 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 SETBP1Q9Y6X0 1596 aa7.46□□□□□ -1.22
SVIP-202ENST00000525670 DHX57Q6P158 1386 aaKnown RBP7.46□□□□□ -1.22
SVIP-202ENST00000525670 CHD2O14647 1828 aaKnown RBP7.45□□□□□ -1.22
SVIP-202ENST00000525670 PTPRUQ92729 1446 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 XRCC5P13010 732 aaKnown RBP7.45□□□□□ -1.22
SVIP-202ENST00000525670 LIG1P18858 919 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 PPP2R3AQ06190 1150 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 KRTAP4-12Q9BQ66 201 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms