RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 GDF10P55107 478 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 ELOA3BQ3SY89 546 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 PLEKHO1Q53GL0 409 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-206ENST00000441089 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 CC2D1BQ5T0F9 858 aaKnown RBP6.36□□□□□ -1.39
PTPN4-206ENST00000441089 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 ELOA3Q8NG57 546 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 GGNBP2Q9H3C7 697 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 DOLKQ9UPQ8 538 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 ZBTB1Q9Y2K1 713 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 KNSTRNQ9Y448 316 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 LAMA2P24043 3122 aaKnown RBP6.36□□□□□ -1.39
PTPN4-206ENST00000441089 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 H0YGN5 161 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 FYB1O15117 783 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 FKTNO75072 461 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 ALBP02768 609 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 IRF5Q13568 498 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 MCM6Q14566 821 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 AMOTQ4VCS5 1084 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 ARSJQ5FYB0 599 aaPredicted RBP6.35□□□□□ -1.39
PTPN4-206ENST00000441089 C1orf141Q5JVX7 400 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 ZNF530Q6P9A1 599 aaPredicted RBP6.35□□□□□ -1.39
PTPN4-206ENST00000441089 NPM2Q86SE8 214 aaKnown RBP6.35□□□□□ -1.39
PTPN4-206ENST00000441089 SYT9Q86SS6 491 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 NIM1KQ8IY84 436 aa6.35□□□□□ -1.39
PTPN4-206ENST00000441089 A0A1W2PPC1 479 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 KLRG2A4D1S0 409 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-206ENST00000441089 TMEM229AB2RXF0 380 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 CCER2I3L3R5 266 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 M0R082 166 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 STARD3NLO95772 234 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 NID1P14543 1247 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 TXLNAP40222 546 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 EIF5P55010 431 aaKnown RBP6.34□□□□□ -1.39
PTPN4-206ENST00000441089 RALBP1Q15311 655 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 C1orf216Q8TAB5 229 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 ZNF417Q8TAU3 575 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 ZNF587Q96SQ5 575 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-206ENST00000441089 SLC30A3Q99726 388 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 NIFKQ9BYG3 293 aaKnown RBP6.34□□□□□ -1.39
PTPN4-206ENST00000441089 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 SERTAD1Q9UHV2 236 aa6.34□□□□□ -1.39
PTPN4-206ENST00000441089 COL4A5P29400 1685 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 MYBBP1AQ9BQG0 1328 aaKnown RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 PPM1GO15355 546 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 HYAL3O43820 417 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 TBC1D8O95759 1140 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 EN2P19622 333 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 SMTNP53814 917 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 OLFM4Q6UX06 510 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 KRT26Q7Z3Y9 468 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 BCL2L13Q9BXK5 485 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 VPS33BQ9H267 617 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 PRR12Q9ULL5 1215 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 SPTBN5Q9NRC6 3674 aaKnown RBP6.33□□□□□ -1.4
PTPN4-206ENST00000441089 SNED1Q8TER0 1413 aa6.33□□□□□ -1.4
PTPN4-206ENST00000441089 H7C1D1 291 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 GMPSP49915 693 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-206ENST00000441089 USP4Q13107 963 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 TNIP1Q15025 636 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 WASHC4Q2M389 1173 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 GDPD2Q9HCC8 539 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 MARK1Q9P0L2 795 aa6.32□□□□□ -1.4
PTPN4-206ENST00000441089 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 PPIP5K2O43314 1243 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 SELPP16109 830 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 IL6STP40189 918 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 HIRAP54198 1017 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 FKBP1BP68106 108 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 CXCL9Q07325 125 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 SFSWAPQ12872 951 aaKnown RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 LRP8Q14114 963 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 MTFR1Q15390 333 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 PRRT3Q5FWE3 981 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 SAMD5Q5TGI4 173 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 RAB44Q7Z6P3 723 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 RASAL3Q86YV0 1011 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 MICALL1Q8N3F8 863 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 DCPSQ96C86 337 aaKnown RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 TMX4Q9H1E5 349 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-206ENST00000441089 ZNRF3Q9ULT6 936 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 STXBP5LQ9Y2K9 1186 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
PTPN4-206ENST00000441089 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
PTPN4-206ENST00000441089 SOX11P35716 441 aa6.3□□□□□ -1.4
PTPN4-206ENST00000441089 ABL2P42684 1182 aa6.3□□□□□ -1.4
PTPN4-206ENST00000441089 TNNT2P45379 298 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-206ENST00000441089 TM4SF4P48230 202 aa6.3□□□□□ -1.4
PTPN4-206ENST00000441089 VAC14Q08AM6 782 aa6.3□□□□□ -1.4
PTPN4-206ENST00000441089 SREBF2Q12772 1141 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms