RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Unc80Q8BLN6 3261 aa7.39□□□□□ -1.23
Pcdha8-201ENSMUST00000194038 AspmQ8CJ27 3122 aa7.34□□□□□ -1.23
Pcdha8-201ENSMUST00000194038 AtmQ62388 3066 aa7.32□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Gm17416Q30KP4 66 aa7.31□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Lrrc37aB1AWG4 3215 aa7.31□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 2310057N15RikQ9D6T8 200 aa7.31□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 FryE9Q8I9 3020 aa7.31□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Zzef1Q5SSH7 2924 aa7.3□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Prm2P07978 107 aa7.3□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 DspE9Q557 2883 aaKnown RBP7.29□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Adgrg4B7ZCC9 3073 aa7.29□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 Wdfy4E9Q2M9 3149 aa7.28□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 BptfA2A654 3036 aaKnown RBP7.28□□□□□ -1.24
Pcdha8-201ENSMUST00000194038 FrylF8VQ05 3007 aa7.27□□□□□ -1.25
Pcdha8-201ENSMUST00000194038 Igfn1Q3KNY0 2849 aa7.26□□□□□ -1.25
Pcdha8-201ENSMUST00000194038 Gm17402F6Z0L5 76 aa7.23□□□□□ -1.25
Pcdha8-201ENSMUST00000194038 Celsr3Q91ZI0 3301 aa7.23□□□□□ -1.25
Pcdha8-201ENSMUST00000194038 NbeaQ9EPN1 2936 aa7.21□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 Tenm4Q3UHK6 2771 aa7.19□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 2210017I01RikA0A0A6YVV1 95 aa7.17□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 Dmxl2Q8BPN8 3032 aa7.17□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 Pdzd2E9Q1M1 2796 aa7.17□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 Celsr2Q9R0M0 2920 aa7.16□□□□□ -1.26
Pcdha8-201ENSMUST00000194038 FlncQ8VHX6 2726 aaKnown RBP7.14□□□□□ -1.27
Pcdha8-201ENSMUST00000194038 Lama1P19137 3084 aa7.08□□□□□ -1.28
Pcdha8-201ENSMUST00000194038 Tenm3Q9WTS6 2715 aa7.08□□□□□ -1.28
Pcdha8-201ENSMUST00000194038 Chd9Q8BYH8 2885 aa7.01□□□□□ -1.29
Pcdha8-201ENSMUST00000194038 LrbaQ9ESE1 2856 aa7.01□□□□□ -1.29
Pcdha8-201ENSMUST00000194038 Brca2P97929 3329 aa6.97□□□□□ -1.29
Pcdha8-201ENSMUST00000194038 Zfhx3Q61329 3726 aa6.96□□□□□ -1.29
Pcdha8-201ENSMUST00000194038 Nf1Q04690 2841 aa6.95□□□□□ -1.3
Pcdha8-201ENSMUST00000194038 Trank1Q8BV79 2999 aa6.94□□□□□ -1.3
Pcdha8-201ENSMUST00000194038 Dchs2A0A0A6YW72 3346 aa6.92□□□□□ -1.3
Pcdha8-201ENSMUST00000194038 Col6a3E9PWQ3 3284 aa6.91□□□□□ -1.3
Pcdha8-201ENSMUST00000194038 Gm9736A0A1W2P7N1 277 aa6.89□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 Gm11939A2A592 99 aa6.88□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 Helz2E9QAM5 2947 aaKnown RBP6.88□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 Wdfy3Q6VNB8 3508 aa6.85□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 VcanQ62059 3357 aa6.85□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 Tenm1Q9WTS4 2731 aa6.85□□□□□ -1.31
Pcdha8-201ENSMUST00000194038 Gm19668J3QMD1 248 aa6.81□□□□□ -1.32
Pcdha8-201ENSMUST00000194038 4933428G20RikQ9D3X4 101 aa6.8□□□□□ -1.32
Pcdha8-201ENSMUST00000194038 Krtap3-2Q9D638 99 aa6.77□□□□□ -1.33
Pcdha8-201ENSMUST00000194038 Krtap3-3Q9D7P0 99 aa6.77□□□□□ -1.33
Pcdha8-201ENSMUST00000194038 Vps13cQ8BX70 3748 aa6.72□□□□□ -1.33
Pcdha8-201ENSMUST00000194038 SpegQ62407 3262 aa6.72□□□□□ -1.33
Pcdha8-201ENSMUST00000194038 Tenm2Q9WTS5 2764 aa6.72□□□□□ -1.33
Pcdha8-201ENSMUST00000194038 Krtap13-1Q8K198 168 aa6.69□□□□□ -1.34
Pcdha8-201ENSMUST00000194038 Krtap3-1A2A591 98 aa6.69□□□□□ -1.34
Pcdha8-201ENSMUST00000194038 RelnQ60841 3461 aa6.68□□□□□ -1.34
Pcdha8-201ENSMUST00000194038 Dchs1E9PVD3 3291 aa6.66□□□□□ -1.34
Pcdha8-201ENSMUST00000194038 Megf8P60882 2789 aa6.66□□□□□ -1.34
Pcdha8-201ENSMUST00000194038 Myo15aQ9QZZ4 3511 aa6.65□□□□□ -1.35
Pcdha8-201ENSMUST00000194038 Gm9918Q8BUR5 174 aa6.64□□□□□ -1.35
Pcdha8-201ENSMUST00000194038 DmdP11531 3678 aa6.64□□□□□ -1.35
Pcdha8-201ENSMUST00000194038 Krtap19-5O08632 62 aa6.53□□□□□ -1.36
Pcdha8-201ENSMUST00000194038 Akap9Q70FJ1 3797 aa6.53□□□□□ -1.36
Pcdha8-201ENSMUST00000194038 Muc5acE9QAQ8 3455 aa6.47□□□□□ -1.37
Pcdha8-201ENSMUST00000194038 Gm10318A0A1W2P728 225 aa6.45□□□□□ -1.38
Pcdha8-201ENSMUST00000194038 OtogO55225 2910 aa6.43□□□□□ -1.38
Pcdha8-201ENSMUST00000194038 Zfhx4Q9JJN2 3550 aa6.41□□□□□ -1.38
Pcdha8-201ENSMUST00000194038 VwfQ8CIZ8 2813 aa6.4□□□□□ -1.38
Pcdha8-201ENSMUST00000194038 Fbn1Q61554 2873 aaKnown RBP6.36□□□□□ -1.39
Pcdha8-201ENSMUST00000194038 Ank2Q8C8R3 3898 aa6.35□□□□□ -1.39
Pcdha8-201ENSMUST00000194038 Csmd1Q923L3 3564 aa6.35□□□□□ -1.39
Pcdha8-201ENSMUST00000194038 Lama5Q61001 3718 aa6.35□□□□□ -1.39
Pcdha8-201ENSMUST00000194038 Crct1Q6PAI5 102 aa6.31□□□□□ -1.4
Pcdha8-201ENSMUST00000194038 Krtap7-1Q9D3I6 87 aa6.3□□□□□ -1.4
Pcdha8-201ENSMUST00000194038 Sprr2a3Q4KL71 83 aa6.25□□□□□ -1.41
Pcdha8-201ENSMUST00000194038 Sprr2a1Q9CQK8 83 aa6.25□□□□□ -1.41
Pcdha8-201ENSMUST00000194038 Gm884A2A9H6 3643 aa6.23□□□□□ -1.41
Pcdha8-201ENSMUST00000194038 Krtap1-5A2A590 122 aa6.18□□□□□ -1.42
Pcdha8-201ENSMUST00000194038 Smg1Q8BKX6 3658 aaKnown RBP6.17□□□□□ -1.42
Pcdha8-201ENSMUST00000194038 SpenQ62504 3644 aaKnown RBP6.15□□□□□ -1.43
Pcdha8-201ENSMUST00000194038 Krtap19-9aF8WH65 55 aa6.01□□□□□ -1.45
Pcdha8-201ENSMUST00000194038 Gm6358A0A087WPH4 74 aa5.95□□□□□ -1.46
Pcdha8-201ENSMUST00000194038 Krtap1-4Q3V2D6 188 aa5.95□□□□□ -1.46
Pcdha8-201ENSMUST00000194038 Col7a1Q63870 2944 aa5.95□□□□□ -1.46
Pcdha8-201ENSMUST00000194038 Krtap19-9bQ99NG9 58 aa5.93□□□□□ -1.46
Pcdha8-201ENSMUST00000194038 Dnah14A0A140LIJ4 4489 aa5.89□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Huwe1Q7TMY8 4377 aaKnown RBP5.89□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Muc6Q80T03 2850 aa5.88□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Svep1A2AVA0 3567 aa5.88□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Gm19402J3QJV4 266 aa5.87□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Cmya5Q70KF4 3739 aa5.84□□□□□ -1.47
Pcdha8-201ENSMUST00000194038 Dnah5Q8VHE6 4621 aa5.79□□□□□ -1.48
Pcdha8-201ENSMUST00000194038 Krtap8-1O08633 61 aa5.79□□□□□ -1.48
Pcdha8-201ENSMUST00000194038 Dnah10D3YYQ8 4591 aa5.78□□□□□ -1.48
Pcdha8-201ENSMUST00000194038 LystP97412 3788 aa5.77□□□□□ -1.49
Pcdha8-201ENSMUST00000194038 Krtap12-1Q9Z287 130 aa5.73□□□□□ -1.49
Pcdha8-201ENSMUST00000194038 Stard9Q80TF6 4561 aa5.73□□□□□ -1.49
Pcdha8-201ENSMUST00000194038 Csmd2V9GX34 3611 aa5.71□□□□□ -1.49
Pcdha8-201ENSMUST00000194038 Muc4Q8JZM8 3443 aa5.71□□□□□ -1.5
Pcdha8-201ENSMUST00000194038 Gm18596A0A1W2P860 280 aa5.68□□□□□ -1.5
Pcdha8-201ENSMUST00000194038 Vps13dB1ART2 4390 aa5.66□□□□□ -1.5
Pcdha8-201ENSMUST00000194038 Dnah17Q69Z23 4481 aa5.61□□□□□ -1.51
Pcdha8-201ENSMUST00000194038 LorP18165 486 aa5.61□□□□□ -1.51
Pcdha8-201ENSMUST00000194038 TnxbO35452 4006 aa5.58□□□□□ -1.52
Pcdha8-201ENSMUST00000194038 PlecQ9QXS1 4691 aaKnown RBP5.58□□□□□ -1.52
Pcdha8-201ENSMUST00000194038 BsnO88737 3942 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms